Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 3.9e-265 917.5 456 100.0
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 2.5e-259 898.3 456 98.0
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 8.0e-250 866.7 456 94.1
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 5.7e-248 860.5 456 93.6
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 7.5e-248 860.1 456 93.4
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 2.2e-244 848.6 456 92.1
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 5.5e-243 844.0 454 91.4
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 6.0e-213 744.2 461 79.8
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 1.6e-210 736.1 454 78.9
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 2.1e-210 735.7 456 78.3
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 1.1e-206 723.4 457 76.6
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 2.1e-205 719.2 460 77.0
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 3.5e-205 718.4 460 78.5
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 1.0e-204 716.8 466 76.6
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 1.1e-203 713.4 463 76.0
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 7.3e-203 710.7 463 75.6
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 1.1e-198 696.8 461 75.7
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 2.7e-197 692.2 461 74.8
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 4.6e-197 691.4 473 73.2
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 3.0e-196 688.7 454 74.9
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 1.1e-195 686.8 468 73.1
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 1.3e-194 683.3 460 73.3
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 3.6e-194 681.8 461 71.1
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 1.1e-193 680.2 462 72.5
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 1.8e-193 679.5 460 74.1
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 4.0e-193 678.3 466 73.2
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 1.5e-192 676.4 456 73.5
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.5e-192 676.4 454 73.6
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 1.5e-192 676.4 460 72.6
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 2.0e-192 676.0 454 72.9
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 2.6e-192 675.6 460 72.8
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 7.6e-192 674.1 458 72.5
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 1.3e-191 673.3 459 73.0
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 1.3e-191 673.3 454 72.9
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 1.3e-191 673.3 454 73.1
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 1.3e-191 673.3 459 72.1
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 3.8e-191 671.8 454 72.7
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 5.4e-190 667.9 455 72.1
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 1.2e-189 666.8 460 71.1
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 2.7e-189 665.6 459 71.0
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 2.7e-189 665.6 455 71.9
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 4.6e-189 664.8 463 70.4
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 6.0e-189 664.5 462 70.6
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 1.8e-188 662.9 462 70.8
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 3.0e-188 662.1 454 71.4
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 3.0e-188 662.1 461 72.0
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 6.7e-188 661.0 448 71.9
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 6.7e-188 661.0 477 69.2
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 8.7e-188 660.6 461 70.7
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 1.5e-187 659.8 461 70.3
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 3.3e-187 658.7 461 70.7
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 5.6e-187 657.9 461 70.9
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.6e-186 656.4 455 71.0
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 2.1e-186 656.0 464 70.3
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.8e-186 655.6 464 70.3
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 2.8e-186 655.6 457 73.1
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 3.7e-186 655.2 461 70.5
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 6.2e-186 654.4 473 69.1
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 6.2e-186 654.4 458 71.8
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 1.1e-185 653.7 461 70.7
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 2.4e-185 652.5 459 69.1
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 9.0e-185 650.6 456 69.5
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 2.0e-184 649.4 452 71.0
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 4.5e-184 648.3 450 71.1
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 5.8e-184 647.9 456 70.6
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 5.8e-184 647.9 456 70.6
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 7.6e-184 647.5 463 70.4
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 9.9e-184 647.1 455 70.5
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.3e-183 646.7 459 71.0
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 2.9e-183 645.6 454 70.7
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 4.9e-183 644.8 458 70.1
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 4.9e-183 644.8 459 68.6
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 3.2e-182 642.1 457 69.4
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 7.1e-182 641.0 459 69.9
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 9.3e-182 640.6 501 65.1
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 2.3e-180 636.0 460 68.7
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 2.3e-180 636.0 426 73.9
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 3.9e-180 635.2 463 68.0
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 5.1e-180 634.8 472 68.4
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 6.2e-178 627.9 458 67.5
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 1.0e-175 620.5 444 69.6
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.0e-175 620.5 461 68.1
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.5e-174 615.9 459 67.3
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 4.2e-174 615.1 510 62.0
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 9.3e-174 614.0 468 66.9
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 6.9e-169 597.8 460 64.3
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.7e-167 593.2 473 65.3
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 6.7e-164 581.3 401 70.1
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 1.9e-163 579.7 460 63.0
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.3e-163 578.6 410 68.8
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.8e-162 575.9 457 64.8
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 4.5e-160 568.5 411 67.9
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 3.6e-157 558.9 460 62.8
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 8.8e-156 554.3 427 65.3
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 1.1e-150 537.3 459 62.5
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 1.4e-145 520.4 456 60.7
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 2.7e-136 489.6 311 78.1
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 5.0e-135 485.3 448 54.2
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 8.5e-135 484.6 417 62.1
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 1.4e-129 467.2 343 67.1
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 6.6e-119 431.8 299 72.6
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 5.2e-116 422.2 281 72.2
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 1.0e-111 407.9 305 65.9
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 9.2e-105 384.8 332 62.0
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 3.0e-103 379.8 457 45.7
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 4.3e-102 375.9 345 58.8
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 2.1e-96 357.1 418 46.4
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 5.2e-92 342.4 453 46.4
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 3.8e-90 336.3 378 50.8
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 4.1e-89 332.8 466 43.3
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 7.8e-88 328.6 471 39.7
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 2.4e-84 317.0 457 40.7
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 2.0e-83 313.9 227 64.8
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 3.8e-82 309.7 301 55.5
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 1.6e-80 304.3 232 67.2
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 3.1e-76 290.0 243 65.0
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 6.7e-71 272.3 256 52.3
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 8.2e-61 238.8 164 68.9
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 2.1e-56 224.2 158 69.6
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 3.5e-56 223.4 119 89.9
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 5.3e-44 183.0 158 64.6
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 2.6e-38 164.1 128 67.2
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 8.2e-37 159.1 120 67.5
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 1.8e-36 157.9 124 62.9
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 1.8e-36 157.9 120 65.0
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 4.2e-33 146.7 82 85.4
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 1.7e-26 124.8 102 66.7
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-22 112.1 418 27.3
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 1.0e-18 99.0 103 53.4
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 6.1e-16 89.7 52 80.8
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 2.7e-11 74.3 54 72.2
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 2.7e-11 74.3 63 57.1


User provided reference genes

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