Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003564g0040 Nicotiana tabacum HOM05D000232 ORTHO05D286542 2.1e-61 238.8 120 100.0
GSVIVG01009388001 Vitis vinifera HOM05D000232 ORTHO05D000145 2.8e-13 79.0 64 60.9
GSVIVG01009390001 Vitis vinifera HOM05D000232 ORTHO05D000145 3.7e-13 78.6 64 57.8
Atru.chr13.787 Acer truncatum HOM05D000232 ORTHO05D000145 3.1e-12 75.5 68 57.4
Dinv39250 Davidia involucrata HOM05D000702 ORTHO05D001796 3.1e-12 75.5 66 59.1
Dinv44992 Davidia involucrata HOM05D000232 ORTHO05D000145 3.1e-12 75.5 69 52.2
Sabra14G0013700 Salix brachista HOM05D000232 ORTHO05D000145 3.1e-12 75.5 113 41.6
Thecc.08G093000 Theobroma cacao HOM05D000232 ORTHO05D000145 4.1e-12 75.1 113 39.8
Atru.chr13.788 Acer truncatum HOM05D000232 ORTHO05D000145 9.1e-12 73.9 72 52.8
QL02p002866 Quercus lobata HOM05D000232 ORTHO05D000145 9.1e-12 73.9 74 51.4
Ciclev10000926m.g Citrus clementina HOM05D000232 ORTHO05D000145 1.2e-11 73.6 69 53.6
CSS0002018 Camellia sinensis var. sinensis HOM05D000232 ORTHO05D000145 1.6e-11 73.2 66 56.1
ECA246G4692 Erigeron canadensis HOM05D000232 ORTHO05D000145 1.6e-11 73.2 66 54.5
Nitab4.5_0003564g0020 Nicotiana tabacum HOM05D000232 ORTHO05D000145 1.6e-11 73.2 69 56.5
ClCG05G020370 Citrullus lanatus HOM05D000232 ORTHO05D000145 2.0e-11 72.8 73 49.3
ClCG05G020380 Citrullus lanatus HOM05D000232 ORTHO05D000145 2.0e-11 72.8 73 49.3
Sabra14G0013800 Salix brachista HOM05D000232 ORTHO05D000145 2.0e-11 72.8 117 39.3
Nitab4.5_0000934g0220 Nicotiana tabacum HOM05D000232 ORTHO05D000145 2.7e-11 72.4 62 59.7
Oeu012046.1 Olea europaea HOM05D000232 ORTHO05D000145 2.7e-11 72.4 69 52.2
Potri.014G020700 Populus trichocarpa HOM05D000232 ORTHO05D000145 2.7e-11 72.4 113 40.7
Thecc.08G092800 Theobroma cacao HOM05D000232 ORTHO05D000145 3.5e-11 72.0 68 55.9
Thecc.08G092900 Theobroma cacao HOM05D000232 ORTHO05D000145 3.5e-11 72.0 68 55.9
GSVIVG01017290001 Vitis vinifera HOM05D000232 ORTHO05D000145 3.5e-11 72.0 73 47.9
Dinv29253 Davidia involucrata HOM05D000232 ORTHO05D000145 4.5e-11 71.6 74 52.7
Sabra14G0013900 Salix brachista HOM05D000232 ORTHO05D000145 4.5e-11 71.6 117 38.5
Sed0018041 Sechium edule HOM05D000232 ORTHO05D000145 4.5e-11 71.6 69 49.3
Cc10_g05360 Coffea canephora HOM05D000232 ORTHO05D000145 5.9e-11 71.2 66 54.5
Cc10_g05390 Coffea canephora HOM05D000232 ORTHO05D000145 5.9e-11 71.2 66 54.5
Duzib041G0658 Durio zibethinus HOM05D000232 ORTHO05D000145 5.9e-11 71.2 69 55.1
Duzib093G0031 Durio zibethinus HOM05D000232 ORTHO05D000145 5.9e-11 71.2 69 56.5
Thecc.08G093700 Theobroma cacao HOM05D000232 ORTHO05D000145 5.9e-11 71.2 74 48.6
Manes.05G179100 Manihot esculenta HOM05D000232 ORTHO05D000145 7.7e-11 70.9 72 52.8
Manes.05G179300 Manihot esculenta HOM05D000232 ORTHO05D000145 7.7e-11 70.9 74 51.4
MELO3C016799.2 Cucumis melo HOM05D000232 ORTHO05D000145 1.0e-10 70.5 69 50.7
Migut.N02759 Erythranthe guttata HOM05D000232 ORTHO05D000145 1.0e-10 70.5 62 56.5
HanXRQChr01g0028001 Helianthus annuus HOM05D000232 ORTHO05D000145 1.0e-10 70.5 70 51.4
TAR625G1248 Trochodendron aralioides HOM05D000232 ORTHO05D000145 1.0e-10 70.5 62 59.7
Actinidia22670 Actinidia chinensis HOM05D000232 ORTHO05D000145 1.3e-10 70.1 68 50.0
CsaV3_4G034860 Cucumis sativus L. HOM05D000232 ORTHO05D000145 1.3e-10 70.1 73 46.6
Eucgr.F00134 Eucalyptus grandis HOM05D000232 ORTHO05D000145 1.3e-10 70.1 70 50.0
Potri.014G020600 Populus trichocarpa HOM05D000232 ORTHO05D000145 1.3e-10 70.1 113 38.9
Potri.014G020432 Populus trichocarpa HOM05D000232 ORTHO05D000145 1.7e-10 69.7 110 41.8
QL02p002861 Quercus lobata HOM05D000232 ORTHO05D000145 1.7e-10 69.7 70 54.3
Atru.chr13.789 Acer truncatum HOM05D000232 ORTHO05D000145 2.3e-10 69.3 67 53.7
COL.COLO4_28548 Corchorus olitorius HOM05D000232 ORTHO05D000145 2.3e-10 69.3 68 55.9
Lsat_1_v5_gn_6_112960 Lactuca sativa HOM05D000232 ORTHO05D000145 2.9e-10 68.9 70 51.4
vmacro21464 Vaccinium macrocarpon HOM05D000232 ORTHO05D000145 2.9e-10 68.9 70 50.0
vmacro21465 Vaccinium macrocarpon HOM05D000232 ORTHO05D000145 2.9e-10 68.9 62 56.5
Eucgr.F00139 Eucalyptus grandis HOM05D000232 ORTHO05D000145 3.8e-10 68.6 68 50.0
Nitab4.5_0000569g0130 Nicotiana tabacum HOM05D000232 ORTHO05D000145 3.8e-10 68.6 68 52.9
Potri.014G020500 Populus trichocarpa HOM05D000232 ORTHO05D000145 3.8e-10 68.6 113 39.8
PGR083G1597 Punica granatum HOM05D000232 ORTHO05D000145 3.8e-10 68.6 60 51.7
Solyc04g078270.3 Solanum lycopersicum HOM05D000232 ORTHO05D000145 3.8e-10 68.6 70 55.7
Sopen04g031870 Solanum pennellii HOM05D000232 ORTHO05D000145 3.8e-10 68.6 70 55.7
PGSC0003DMG400021541 Solanum tuberosum HOM05D000232 ORTHO05D000145 3.8e-10 68.6 70 55.7
Thecc.08G093600 Theobroma cacao HOM05D000232 ORTHO05D000145 3.8e-10 68.6 66 50.0
GSVIVG01017286001 Vitis vinifera HOM05D000232 ORTHO05D000145 3.8e-10 68.6 66 53.0
CiPaw.15G047700 Carya illinoinensis HOM05D000232 ORTHO05D000145 5.0e-10 68.2 120 36.7
Potri.002G121400 Populus trichocarpa HOM05D000232 ORTHO05D000145 5.0e-10 68.2 62 54.8
QL02p002873 Quercus lobata HOM05D000232 ORTHO05D000145 5.0e-10 68.2 70 52.9
Sed0020929 Sechium edule HOM05D000232 ORTHO05D000145 5.0e-10 68.2 68 48.5
CiPaw.15G048000 Carya illinoinensis HOM05D000232 ORTHO05D000145 6.6e-10 67.8 100 42.0
Hma1.2p1_0923F.1_g237100 Hydrangea macrophylla HOM05D000232 ORTHO05D000145 6.6e-10 67.8 65 56.9
PGR083G0478 Punica granatum HOM05D000232 ORTHO05D000145 6.6e-10 67.8 62 46.8
PGSC0003DMG400021542 Solanum tuberosum HOM05D000232 ORTHO05D000145 6.6e-10 67.8 70 52.9
Eucgr.F00137 Eucalyptus grandis HOM05D000232 ORTHO05D000145 8.6e-10 67.4 68 48.5
Gorai.010G024400 Gossypium raimondii HOM05D000232 ORTHO05D000145 8.6e-10 67.4 70 45.7
TWI36G1597 Tripterygium wilfordii HOM05D000232 ORTHO05D000145 8.6e-10 67.4 66 51.5
CiPaw.15G047800 Carya illinoinensis HOM05D000232 ORTHO05D000145 1.1e-09 67.0 62 50.0
CiPaw.15G047900 Carya illinoinensis HOM05D000232 ORTHO05D000145 1.1e-09 67.0 62 50.0
CiPaw.15G048100 Carya illinoinensis HOM05D000232 ORTHO05D000145 1.1e-09 67.0 62 50.0
Hund05200 Selenicereus undatus HOM05D000232 ORTHO05D000145 1.1e-09 67.0 75 48.0
PGSC0003DMG400021540 Solanum tuberosum HOM05D000232 ORTHO05D000145 1.1e-09 67.0 62 56.5
PGR083G1535 Punica granatum HOM05D000232 ORTHO05D000145 1.5e-09 66.6 60 46.7
Sopen04g031860 Solanum pennellii HOM05D000232 ORTHO05D000145 1.5e-09 66.6 70 54.3
EL10Ac1g02327 Beta vulgaris HOM05D000232 ORTHO05D000145 1.9e-09 66.2 78 46.2
PGSC0003DMG400015402 Solanum tuberosum HOM05D000232 ORTHO05D000145 1.9e-09 66.2 66 51.5
ECA246G5039 Erigeron canadensis HOM05D000232 ORTHO05D000145 2.5e-09 65.9 66 50.0
Duzib093G0793 Durio zibethinus HOM05D000232 ORTHO05D000145 3.3e-09 65.5 62 53.2
Potri.002G121200 Populus trichocarpa HOM05D000232 ORTHO05D000145 3.3e-09 65.5 108 39.8
PGR083G1924 Punica granatum HOM05D000232 ORTHO05D000145 3.3e-09 65.5 62 43.5
Sabra02G0095500 Salix brachista HOM05D000232 ORTHO05D000145 3.3e-09 65.5 62 51.6
Sabra02G0095600 Salix brachista HOM05D000232 ORTHO05D000145 3.3e-09 65.5 62 51.6
GSVIVG01017288001 Vitis vinifera HOM05D000232 ORTHO05D000145 3.3e-09 65.5 64 53.1
CAN.G107.8 Capsicum annuum HOM05D000232 ORTHO05D000145 4.2e-09 65.1 64 53.1
Gorai.009G276900 Gossypium raimondii HOM05D000232 ORTHO05D000145 4.2e-09 65.1 69 52.2
Oeu061834.1 Olea europaea HOM05D000232 ORTHO05D000145 4.2e-09 65.1 62 53.2
PGR083G0076 Punica granatum HOM05D000232 ORTHO05D000145 4.2e-09 65.1 57 49.1
CAN.G1054.10 Capsicum annuum HOM05D000232 ORTHO05D000145 5.5e-09 64.7 66 51.5
Gohir.D05G265100 Gossypium hirsutum HOM05D000232 ORTHO05D000145 5.5e-09 64.7 69 52.2
Solyc12g088510.1 Solanum lycopersicum HOM05D000232 ORTHO05D000145 5.5e-09 64.7 65 53.8
Gohir.A06G022700 Gossypium hirsutum HOM05D000232 ORTHO05D000145 7.2e-09 64.3 113 37.2
Manes.05G179450 Manihot esculenta HOM05D000232 ORTHO05D000145 7.2e-09 64.3 72 48.6
PGSC0003DMG400011560 Solanum tuberosum HOM05D000232 ORTHO05D000145 7.2e-09 64.3 111 39.6
Gohir.A05G262800 Gossypium hirsutum HOM05D000232 ORTHO05D000145 9.5e-09 63.9 67 50.7
Peaxi162Scf00160g00127 Petunia axillaris HOM05D000232 ORTHO05D000145 9.5e-09 63.9 110 40.0
Sopen12g030440 Solanum pennellii HOM05D000232 ORTHO05D000145 9.5e-09 63.9 111 37.8
Eucgr.F00140 Eucalyptus grandis HOM05D000232 ORTHO05D000145 1.2e-08 63.5 68 47.1
Oeu061833.1 Olea europaea HOM05D000232 ORTHO05D000145 1.2e-08 63.5 62 51.6
Potri.002G121100 Populus trichocarpa HOM05D000232 ORTHO05D000145 1.2e-08 63.5 46 63.0
Sabra02G0095400 Salix brachista HOM05D000232 ORTHO05D000145 1.2e-08 63.5 61 50.8
Rhsim06G0058500 Rhododendron simsii HOM05D000232 ORTHO05D000145 1.6e-08 63.2 68 47.1
SalBow7G1405 Salvia bowleyana HOM05D000232 ORTHO05D000145 1.6e-08 63.2 77 44.2
AUR62034965 Chenopodium quinoa HOM05D000232 ORTHO05D000145 2.1e-08 62.8 75 46.7
SalBow7G2850 Salvia bowleyana HOM05D000232 ORTHO05D000145 2.1e-08 62.8 64 50.0
Migut.J00394 Erythranthe guttata HOM05D000232 ORTHO05D000145 2.8e-08 62.4 75 42.7
Rhsim06G0058400 Rhododendron simsii HOM05D000232 ORTHO05D000145 2.8e-08 62.4 66 48.5
Cpa.g.sc21.128 Carica papaya HOM05D000232 ORTHO05D000145 3.6e-08 62.0 61 52.5
COL.COLO4_28554 Corchorus olitorius HOM05D000232 ORTHO05D000145 3.6e-08 62.0 68 50.0
CsaV3_4G034850 Cucumis sativus L. HOM05D000232 ORTHO05D000145 3.6e-08 62.0 69 42.0
Solyc12g088460.3 Solanum lycopersicum HOM05D000232 ORTHO05D000145 3.6e-08 62.0 109 38.5
CANSAT25G2942 Cannabis sativa HOM05D000232 ORTHO05D000145 4.7e-08 61.6 70 50.0
HanXRQChr04g0103111 Helianthus annuus HOM05D000232 ORTHO05D000145 4.7e-08 61.6 63 57.1
Manes.05G179200 Manihot esculenta HOM05D000232 ORTHO05D000145 4.7e-08 61.6 114 35.1
Manes.18G043500 Manihot esculenta HOM05D000232 ORTHO05D000145 4.7e-08 61.6 62 53.2
ClCG05G020360 Citrullus lanatus HOM05D000232 ORTHO05D000145 6.1e-08 61.2 56 51.8
HanXRQChr08g0213331 Helianthus annuus HOM05D000232 ORTHO05D000145 6.1e-08 61.2 63 55.6
MELO3C016798.2 Cucumis melo HOM05D000232 ORTHO05D000145 8.0e-08 60.8 71 46.5
MSTRG.5706 Avicennia marina HOM05D000232 ORTHO05D000145 1.0e-07 60.5 71 42.3
Cc10_g05400 Coffea canephora HOM05D000232 ORTHO05D000145 1.0e-07 60.5 60 55.0
CiPaw.15G048200 Carya illinoinensis HOM05D000232 ORTHO05D000145 1.4e-07 60.1 61 50.8
SalBow3G2026 Salvia bowleyana HOM05D000232 ORTHO05D000145 1.4e-07 60.1 59 45.8
HanXRQChr02g0039981 Helianthus annuus HOM05D000232 ORTHO05D000145 1.8e-07 59.7 73 43.8
HanXRQChr04g0103151 Helianthus annuus HOM05D000232 ORTHO05D000145 1.8e-07 59.7 63 54.0
SGA_v2.0_scaffold214G42273 Striga asiatica HOM05D000232 ORTHO05D000145 1.8e-07 59.7 70 47.1
Cpa.g.sc21.131 Carica papaya HOM05D000232 ORTHO05D000145 2.3e-07 59.3 105 38.1
CsaV3_4G028550 Cucumis sativus L. HOM05D000232 ORTHO05D000145 2.3e-07 59.3 61 47.5
Lsat_1_v5_gn_1_23701 Lactuca sativa HOM05D000232 ORTHO05D000145 2.3e-07 59.3 77 42.9
Potri.002G121300 Populus trichocarpa HOM05D000232 ORTHO05D000145 2.3e-07 59.3 62 51.6
TWI56G0736 Tripterygium wilfordii HOM05D000232 ORTHO05D000145 2.3e-07 59.3 62 54.8
Cpa.g.sc688.3 Carica papaya HOM05D000232 ORTHO05D000145 3.0e-07 58.9 62 48.4
Haze_18103 Corylus avellana HOM05D000232 ORTHO05D000145 3.0e-07 58.9 72 45.8
ECA232G3513 Erigeron canadensis HOM05D000232 ORTHO05D000145 3.0e-07 58.9 66 48.5
Migut.M00373 Erythranthe guttata HOM05D000232 ORTHO05D000145 3.0e-07 58.9 68 45.6
Gohir.A05G262900 Gossypium hirsutum HOM05D000232 ORTHO05D000145 3.0e-07 58.9 69 47.8
HanXRQChr02g0048361 Helianthus annuus HOM05D000232 ORTHO05D000145 3.0e-07 58.9 66 43.9
Sed0006431 Sechium edule HOM05D000232 ORTHO05D000145 3.0e-07 58.9 70 45.7
Peaxi162Scf00081g00620 Petunia axillaris HOM05D000232 ORTHO05D000145 4.0e-07 58.5 71 49.3
Sc11g0002750 Simmondsia chinensis HOM05D000232 ORTHO05D000145 4.0e-07 58.5 67 43.3
ClCG05G020350 Citrullus lanatus HOM05D000232 ORTHO05D000145 5.2e-07 58.2 66 43.9
Ciclev10008060m.g Citrus clementina HOM05D000232 ORTHO05D000145 5.2e-07 58.2 113 37.2
Cc10_g05340 Coffea canephora HOM05D000232 ORTHO05D000145 5.2e-07 58.2 73 45.2
CsaV3_4G034840 Cucumis sativus L. HOM05D000232 ORTHO05D000145 5.2e-07 58.2 64 45.3
Dinv39251 Davidia involucrata HOM05D000232 ORTHO05D000145 5.2e-07 58.2 62 50.0
HanXRQChr04g0102251 Helianthus annuus HOM05D000232 ORTHO05D000145 5.2e-07 58.2 73 39.7
HanXRQChr04g0102311 Helianthus annuus HOM05D000232 ORTHO05D000145 5.2e-07 58.2 71 46.5
HanXRQChr04g0102201 Helianthus annuus HOM05D000232 ORTHO05D000145 6.8e-07 57.8 77 39.0
HanXRQChr04g0102231 Helianthus annuus HOM05D000232 ORTHO05D000145 6.8e-07 57.8 77 39.0
Cpa.g.sc17.199 Carica papaya HOM05D000232 ORTHO05D000145 8.9e-07 57.4 105 39.0
Cpa.g.sc21.132 Carica papaya HOM05D000232 ORTHO05D000145 8.9e-07 57.4 60 48.3
MELO3C010452.2 Cucumis melo HOM05D000232 ORTHO05D000145 8.9e-07 57.4 61 45.9
ECA232G3616 Erigeron canadensis HOM05D000232 ORTHO05D000145 8.9e-07 57.4 75 49.3
Cfa018027 Carpinus fangiana HOM05D000232 ORTHO05D000145 1.2e-06 57.0 64 48.4
HanXRQChr08g0213301 Helianthus annuus HOM05D000232 ORTHO05D000145 1.2e-06 57.0 63 52.4
EL10Ac1g02328 Beta vulgaris HOM05D000232 ORTHO05D000145 1.5e-06 56.6 73 43.8
Lsat_1_v5_gn_1_23581 Lactuca sativa HOM05D000232 ORTHO05D000145 1.5e-06 56.6 77 41.6
Lsat_1_v5_gn_1_23721 Lactuca sativa HOM05D000232 ORTHO05D000145 1.5e-06 56.6 77 41.6
ClCG11G015530 Citrullus lanatus HOM05D000232 ORTHO05D000145 2.6e-06 55.8 65 44.6
Duzib093G0903 Durio zibethinus HOM05D000232 ORTHO05D000145 2.6e-06 55.8 64 50.0
ECA246G2701 Erigeron canadensis HOM05D000232 ORTHO05D000145 2.6e-06 55.8 59 45.8
AUR62034966 Chenopodium quinoa HOM05D000232 ORTHO05D000145 3.4e-06 55.5 62 45.2
HanXRQChr02g0039991 Helianthus annuus HOM05D000232 ORTHO05D000145 3.4e-06 55.5 63 49.2
HanXRQChr09g0266451 Helianthus annuus HOM05D000232 ORTHO05D000145 3.4e-06 55.5 70 44.3
Nitab4.5_0000121g0090 Nicotiana tabacum HOM05D000232 ORTHO05D000145 3.4e-06 55.5 65 55.4
Sc15g0007120 Simmondsia chinensis HOM05D000232 ORTHO05D000145 3.4e-06 55.5 59 47.5
Ah.16g104240 Amaranthus hybridus HOM05D000232 ORTHO05D000145 4.4e-06 55.1 63 47.6
HanXRQChr04g0102331 Helianthus annuus HOM05D000232 ORTHO05D000145 4.4e-06 55.1 71 45.1
Lsat_1_v5_gn_4_155980 Lactuca sativa HOM05D000232 ORTHO05D000145 4.4e-06 55.1 64 45.3
AUR62043881 Chenopodium quinoa HOM05D000232 ORTHO05D000145 5.7e-06 54.7 62 45.2
FAN24G0088 Fragaria x ananassa HOM05D000232 ORTHO05D000145 5.7e-06 54.7 74 43.2
Gohir.A05G207100 Gossypium hirsutum HOM05D000232 ORTHO05D000145 5.7e-06 54.7 73 46.6
Gorai.009G217000 Gossypium raimondii HOM05D000232 ORTHO05D000145 5.7e-06 54.7 70 44.3
Sc02g0007670 Simmondsia chinensis HOM05D000232 ORTHO05D000145 5.7e-06 54.7 69 46.4
SGA_v2.0_scaffold126G33864 Striga asiatica HOM05D000232 ORTHO05D000145 5.7e-06 54.7 62 45.2
SGA_v2.0_scaffold2G00899 Striga asiatica HOM05D000232 ORTHO05D000145 5.7e-06 54.7 114 37.7
GSVIVG01009391001 Vitis vinifera HOM05D000232 ORTHO05D000145 5.7e-06 54.7 64 45.3
Cpa.g.sc21.127 Carica papaya HOM05D000232 ORTHO05D000145 7.5e-06 54.3 62 43.5
Cc10_g05350 Coffea canephora HOM05D000232 ORTHO05D000145 7.5e-06 54.3 70 47.1
CANSAT25G2886 Cannabis sativa HOM05D000232 ORTHO05D000145 9.8e-06 53.9 62 48.4
Gohir.D02G089700 Gossypium hirsutum HOM05D000232 ORTHO05D000145 9.8e-06 53.9 61 50.8
HanXRQChr02g0040011 Helianthus annuus HOM05D000232 ORTHO05D000145 9.8e-06 53.9 71 42.3
PGR004G0001 Punica granatum HOM05D000232 ORTHO05D000145 9.8e-06 53.9 73 46.6


User provided reference genes

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