Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.3e-100 369.8 194 100.0
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.1e-96 356.7 195 96.9
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 7.7e-85 317.4 195 90.3
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 1.1e-80 303.5 195 86.2
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.5e-80 303.1 195 85.6
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 1.1e-78 297.0 198 86.4
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 2.0e-77 292.7 195 84.1
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 1.1e-67 260.4 199 75.9
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 1.1e-67 260.4 199 76.4
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 5.2e-65 251.5 201 73.6
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 3.4e-64 248.8 203 73.4
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.7e-63 246.5 198 72.7
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 5.4e-62 241.5 197 71.6
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 1.6e-61 240.0 199 69.3
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.0e-61 239.6 178 74.2
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 7.7e-61 237.7 200 71.5
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 7.7e-61 237.7 197 71.6
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 2.2e-60 236.1 199 69.3
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 3.8e-60 235.3 197 69.5
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.8e-60 235.3 172 75.0
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 6.5e-60 234.6 199 69.8
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 8.5e-60 234.2 196 67.9
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 8.5e-60 234.2 199 69.8
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 1.5e-59 233.4 196 68.4
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 3.2e-59 232.3 200 70.0
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 3.2e-59 232.3 195 69.2
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 4.2e-59 231.9 177 74.0
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 7.2e-59 231.1 196 67.9
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 1.2e-58 230.3 198 67.7
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 2.7e-58 229.2 198 68.7
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 4.7e-58 228.4 193 67.9
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 4.7e-58 228.4 198 68.7
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 6.1e-58 228.0 200 67.0
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 6.1e-58 228.0 197 67.0
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 8.0e-58 227.6 178 74.7
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.0e-57 227.3 195 67.7
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.0e-57 227.3 195 67.7
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 1.4e-57 226.9 198 68.2
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 1.4e-57 226.9 155 80.6
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 1.4e-57 226.9 177 73.4
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 1.8e-57 226.5 195 67.2
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 2.3e-57 226.1 143 84.6
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 2.3e-57 226.1 205 68.8
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 4.0e-57 225.3 146 81.5
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 5.2e-57 224.9 142 81.0
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 6.8e-57 224.6 172 75.6
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 1.2e-56 223.8 170 72.9
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 1.5e-56 223.4 170 73.5
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 2.6e-56 222.6 171 72.5
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 2.6e-56 222.6 198 66.2
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 2.6e-56 222.6 192 67.2
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 4.4e-56 221.9 198 67.2
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 5.7e-56 221.5 193 66.8
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 7.5e-56 221.1 140 84.3
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 9.8e-56 220.7 170 74.1
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 9.8e-56 220.7 175 70.9
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 9.8e-56 220.7 171 73.7
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 9.8e-56 220.7 142 79.6
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 1.3e-55 220.3 171 73.7
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 1.7e-55 219.9 197 66.0
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.7e-55 219.9 161 76.4
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 2.2e-55 219.5 137 84.7
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 3.7e-55 218.8 139 82.7
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 4.9e-55 218.4 167 74.9
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 4.9e-55 218.4 174 70.1
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 4.9e-55 218.4 174 70.1
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 6.3e-55 218.0 151 77.5
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 6.3e-55 218.0 138 81.2
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 6.3e-55 218.0 158 75.3
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 6.3e-55 218.0 171 71.9
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 6.3e-55 218.0 166 73.5
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 8.3e-55 217.6 138 81.2
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.1e-54 217.2 174 70.1
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 1.1e-54 217.2 138 81.2
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.4e-54 216.9 194 67.5
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 1.4e-54 216.9 168 71.4
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 1.4e-54 216.9 194 66.0
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.8e-54 216.5 169 72.2
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.8e-54 216.5 145 81.4
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.4e-54 216.1 200 64.0
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.4e-54 216.1 172 70.9
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 2.4e-54 216.1 195 64.6
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 3.1e-54 215.7 144 79.2
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 3.1e-54 215.7 176 68.8
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 4.1e-54 215.3 171 71.3
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.1e-54 215.3 195 64.1
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 4.1e-54 215.3 195 64.1
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 4.1e-54 215.3 194 66.0
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 5.4e-54 214.9 152 77.0
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 9.2e-54 214.2 144 77.8
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 1.2e-53 213.8 172 69.8
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 1.6e-53 213.4 172 69.8
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 2.7e-53 212.6 142 80.3
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 2.7e-53 212.6 142 80.3
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 2.7e-53 212.6 142 80.3
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 2.7e-53 212.6 142 80.3
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 2.7e-53 212.6 140 80.7
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 3.5e-53 212.2 149 75.2
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 3.5e-53 212.2 141 80.1
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 5.9e-53 211.5 148 76.4
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 5.9e-53 211.5 182 66.5
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 5.9e-53 211.5 194 60.8
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 1.0e-52 210.7 138 80.4
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 1.7e-52 209.9 138 79.7
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.7e-52 209.9 161 72.7
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 5.0e-52 208.4 140 79.3
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 6.6e-52 208.0 171 69.6
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 6.6e-52 208.0 200 62.5
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 8.6e-52 207.6 176 65.3
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 8.6e-52 207.6 181 68.0
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 1.1e-51 207.2 170 68.8
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 2.5e-51 206.1 172 68.6
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 3.3e-51 205.7 201 61.7
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 4.3e-51 205.3 196 63.8
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 4.3e-51 205.3 193 63.2
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 5.6e-51 204.9 194 62.9
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 7.3e-51 204.5 186 66.7
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 2.1e-50 203.0 172 66.9
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 3.6e-50 202.2 197 61.9
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 4.7e-50 201.8 196 62.8
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 1.0e-49 200.7 182 64.3
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 2.3e-49 199.5 113 92.0
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 4.0e-49 198.7 115 88.7
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 8.9e-49 197.6 138 76.8
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 8.9e-49 197.6 115 88.7
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 8.9e-49 197.6 115 88.7
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 9.8e-48 194.1 112 90.2
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 2.9e-47 192.6 139 76.3
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 3.7e-47 192.2 113 87.6
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 4.9e-47 191.8 113 86.7
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 4.9e-47 191.8 180 62.2
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 5.4e-46 188.3 184 59.2
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 5.4e-46 188.3 136 70.6
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 5.4e-46 188.3 198 58.1
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.3e-44 183.7 191 61.3
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.3e-44 183.7 198 58.1
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 5.0e-44 181.8 172 62.2
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 8.6e-44 181.0 194 54.1
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 4.3e-43 178.7 142 64.8
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 4.3e-43 178.7 138 68.1
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 5.6e-43 178.3 165 64.8
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 7.3e-43 177.9 109 80.7
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 3.6e-42 175.6 161 62.7
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 6.2e-42 174.9 111 82.9
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.3e-41 172.9 174 59.8
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 4.0e-41 172.2 179 58.7
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 8.9e-41 171.0 179 58.1
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 3.2e-38 162.5 111 73.0
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 4.1e-38 162.2 128 74.2
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.6e-37 160.2 113 71.7
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 4.6e-37 158.7 193 54.4
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 7.8e-37 157.9 348 37.6
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 2.3e-36 156.4 156 61.5
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 1.4e-33 147.1 119 63.0
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.3e-27 125.9 161 52.8
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 2.8e-26 122.9 107 57.0
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 2.0e-24 116.7 141 47.5
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 2.9e-23 112.8 95 67.4
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 6.4e-23 111.7 127 55.1
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.9e-22 110.2 94 63.8
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 2.4e-22 109.8 91 65.9
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.6e-21 107.1 93 64.5
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 7.8e-21 104.8 87 67.8
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 5.1e-20 102.1 87 66.7
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 5.1e-20 102.1 87 66.7
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 8.9e-17 91.3 87 58.6
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 9.3e-14 81.3 44 95.5
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.2e-13 80.9 47 87.2
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 6.0e-13 78.6 49 81.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 2.6e-08 63.2 38 81.6


User provided reference genes

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