Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003555g0040 Nicotiana tabacum HOM05D004576 ORTHO05D005321 6.7e-246 853.6 439 100.0
CAN.G575.13 Capsicum annuum HOM05D004576 ORTHO05D005321 3.3e-200 701.8 404 88.4
CAN.G140.19 Capsicum annuum HOM05D004576 ORTHO05D005321 9.5e-192 673.7 405 85.7
Sopen01g002110 Solanum pennellii HOM05D004576 ORTHO05D005321 1.1e-190 670.2 406 85.0
Solyc01g006110.3 Solanum lycopersicum HOM05D004576 ORTHO05D005321 8.9e-190 667.2 406 84.5
PGSC0003DMG400032187 Solanum tuberosum HOM05D004576 ORTHO05D005321 2.2e-188 662.5 406 84.0
Nitab4.5_0005477g0060 Nicotiana tabacum HOM05D004576 ORTHO05D005321 1.5e-184 649.8 410 82.9
CSS0008628 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 1.8e-182 642.9 404 81.2
Dinv35342 Davidia involucrata HOM05D004576 ORTHO05D005321 6.4e-180 634.4 404 80.9
Rhsim09G0206100 Rhododendron simsii HOM05D004576 ORTHO05D005321 1.4e-179 633.3 406 81.3
Peaxi162Scf00441g00115 Petunia axillaris HOM05D004576 ORTHO05D005321 1.2e-178 630.2 403 81.6
GSVIVG01038559001 Vitis vinifera HOM05D004576 ORTHO05D005321 2.7e-178 629.0 404 80.7
Gohir.A05G415000 Gossypium hirsutum HOM05D004576 ORTHO05D005321 5.6e-176 621.3 404 78.0
Gohir.D04G001200 Gossypium hirsutum HOM05D004576 ORTHO05D005321 6.2e-175 617.8 404 77.5
Gorai.012G002200 Gossypium raimondii HOM05D004576 ORTHO05D005321 6.2e-175 617.8 404 77.5
vmacro10126 Vaccinium macrocarpon HOM05D004576 ORTHO05D005321 1.1e-174 617.1 406 78.6
Hund11655 Selenicereus undatus HOM05D004576 ORTHO05D005321 5.3e-174 614.8 404 76.5
Cc02_g01450 Coffea canephora HOM05D004576 ORTHO05D005321 1.2e-173 613.6 404 78.0
Prupe.2G309200 Prunus persica HOM05D004576 ORTHO05D005321 2.9e-172 609.0 405 77.3
Actinidia06144 Actinidia chinensis HOM05D004576 ORTHO05D005321 5.4e-171 604.7 399 78.7
CSS0016084 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 1.3e-169 600.1 404 77.2
COL.COLO4_16771 Corchorus olitorius HOM05D004576 ORTHO05D005321 1.3e-169 600.1 419 73.5
Nn1g00276 Nelumbo nucifera HOM05D004576 ORTHO05D005321 1.8e-169 599.7 412 75.7
EL10Ac3g05272 Beta vulgaris HOM05D004576 ORTHO05D005321 5.6e-168 594.7 404 74.3
CiPaw.06G045600 Carya illinoinensis HOM05D004576 ORTHO05D005321 2.8e-167 592.4 399 76.4
Sc25g0000910 Simmondsia chinensis HOM05D004576 ORTHO05D005321 2.8e-167 592.4 407 75.4
Manes.10G051900 Manihot esculenta HOM05D004576 ORTHO05D005321 3.7e-167 592.0 404 74.0
arahy.Tifrunner.gnm1.ann1.EHU7FT Arachis hypogaea HOM05D004576 ORTHO05D005321 1.4e-166 590.1 405 74.3
arahy.Tifrunner.gnm1.ann1.S03LBS Arachis hypogaea HOM05D004576 ORTHO05D005321 1.4e-166 590.1 405 74.3
Duzib068G0175 Durio zibethinus HOM05D004576 ORTHO05D005321 1.8e-166 589.7 399 75.4
Thecc.03G200200 Theobroma cacao HOM05D004576 ORTHO05D005321 1.8e-166 589.7 404 74.8
Hma1.2p1_1507F.1_g287630 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 3.1e-166 589.0 406 74.9
SalBow4G0465 Salvia bowleyana HOM05D004576 ORTHO05D005321 3.1e-166 589.0 450 68.7
Ca_16714_v3 Cicer arietinum L. HOM05D004576 ORTHO05D005321 4.0e-166 588.6 405 74.6
Cfa016237 Carpinus fangiana HOM05D004576 ORTHO05D005321 6.9e-166 587.8 404 75.0
SGA_v2.0_scaffold192G40533 Striga asiatica HOM05D004576 ORTHO05D005321 1.2e-165 587.0 402 75.4
Ah.07g205540 Amaranthus hybridus HOM05D004576 ORTHO05D005321 1.5e-165 586.6 404 73.5
Migut.F00204 Erythranthe guttata HOM05D004576 ORTHO05D005321 2.0e-165 586.3 404 74.8
Lalb_Chr11g0066931 Lupinus albus HOM05D004576 ORTHO05D005321 7.6e-165 584.3 405 74.8
Cpa.g.sc3.95 Carica papaya HOM05D004576 ORTHO05D005321 1.3e-164 583.6 404 75.2
Hma1.2p1_1587F.1_g292290 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 1.7e-164 583.2 409 75.1
MD01G1217800 Malus domestica HOM05D004576 ORTHO05D005321 1.7e-164 583.2 407 74.2
AUR62019411 Chenopodium quinoa HOM05D004576 ORTHO05D005321 2.2e-164 582.8 404 73.3
TWI39G0751 Tripterygium wilfordii HOM05D004576 ORTHO05D005321 4.9e-164 581.6 409 74.8
Hma1.2p1_0404F.1_g145290 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 6.4e-164 581.3 409 74.8
PGR042G3016 Punica granatum HOM05D004576 ORTHO05D005321 8.4e-164 580.9 403 74.7
MD07G1287100 Malus domestica HOM05D004576 ORTHO05D005321 1.4e-163 580.1 407 74.0
MD07G1287400 Malus domestica HOM05D004576 ORTHO05D005321 1.4e-163 580.1 407 74.0
Manes.07G095000 Manihot esculenta HOM05D004576 ORTHO05D005321 1.4e-163 580.1 405 73.1
Oeu023658.2 Olea europaea HOM05D004576 ORTHO05D005321 4.2e-163 578.6 453 68.4
Phvul.009G051900 Phaseolus vulgaris HOM05D004576 ORTHO05D005321 5.5e-163 578.2 400 75.2
Haze_00204 Corylus avellana HOM05D004576 ORTHO05D005321 7.1e-163 577.8 408 73.0
TAR629G2734 Trochodendron aralioides HOM05D004576 ORTHO05D005321 4.6e-162 575.1 405 74.1
Glyma.04G234900 Glycine max HOM05D004576 ORTHO05D005321 1.0e-161 573.9 400 74.2
MSTRG.27022 Avicennia marina HOM05D004576 ORTHO05D005321 1.3e-161 573.5 402 73.1
VMungo1309G0981 Vigna mungo HOM05D005525 ORTHO05D005321 1.8e-161 573.2 398 74.1
Oeu041059.3 Olea europaea HOM05D004576 ORTHO05D005321 3.9e-161 572.0 443 69.8
RcHm_v2.0_Chr1g0380451 Rosa chinensis HOM05D004576 ORTHO05D005321 3.9e-161 572.0 409 72.1
Atru.chr12.2224 Acer truncatum HOM05D004576 ORTHO05D005321 2.5e-160 569.3 402 72.9
DCAR_020325 Daucus carota HOM05D004576 ORTHO05D005321 3.3e-160 568.9 405 74.3
TAR633G0881 Trochodendron aralioides HOM05D004576 ORTHO05D005321 3.3e-160 568.9 400 73.2
FAN06G0548 Fragaria x ananassa HOM05D004576 ORTHO05D005321 1.3e-159 567.0 409 71.6
CANSAT21G1766 Cannabis sativa HOM05D004576 ORTHO05D005321 1.6e-159 566.6 408 71.8
FvH4_7g31380 Fragaria vesca HOM05D004576 ORTHO05D005321 2.1e-159 566.2 409 71.4
Psat5g076560 Pisum sativum HOM05D004576 ORTHO05D005321 2.8e-159 565.8 405 72.3
FAN06G1560 Fragaria x ananassa HOM05D004576 ORTHO05D005321 3.7e-159 565.5 409 71.6
Eucgr.A01454 Eucalyptus grandis HOM05D004576 ORTHO05D005321 1.1e-158 563.9 404 71.8
FAN01G2495 Fragaria x ananassa HOM05D004576 ORTHO05D005321 1.1e-158 563.9 409 71.1
Potri.012G016500 Populus trichocarpa HOM05D004576 ORTHO05D005321 4.0e-158 562.0 406 71.7
FAN03G3343 Fragaria x ananassa HOM05D004576 ORTHO05D005321 2.6e-157 559.3 409 70.9
AUR62006083 Chenopodium quinoa HOM05D004576 ORTHO05D005321 1.7e-156 556.6 404 71.3
Thhalv10013705m.g Eutrema salsugineum HOM05D004576 ORTHO05D005321 4.9e-156 555.1 406 71.7
Medtr3g091640 Medicago truncatula HOM05D004576 ORTHO05D005321 1.1e-155 553.9 406 71.7
ECA238G3082 Erigeron canadensis HOM05D004576 ORTHO05D005321 2.5e-155 552.7 406 71.2
QL09p008710 Quercus lobata HOM05D004576 ORTHO05D005321 7.1e-155 551.2 439 65.4
Gohir.D12G250200 Gossypium hirsutum HOM05D004576 ORTHO05D005321 9.3e-155 550.8 404 70.5
Gorai.008G268300 Gossypium raimondii HOM05D004576 ORTHO05D005321 9.3e-155 550.8 404 70.5
Lj4g0015379 Lotus japonicus HOM05D004576 ORTHO05D005321 1.6e-154 550.1 402 70.9
CsaV3_5G037660 Cucumis sativus L. HOM05D004576 ORTHO05D005321 2.7e-154 549.3 402 70.4
TPR.G18754 Trifolium pratense HOM05D004576 ORTHO05D005321 2.7e-154 549.3 389 72.8
MBI06_g10867_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 1.0e-153 547.4 430 66.3
Aa31LG9G16760 Aethionema arabicum HOM05D004576 ORTHO05D005321 3.0e-153 545.8 402 69.7
THA.LOC104799972 Tarenaya hassleriana HOM05D004576 ORTHO05D005321 3.9e-153 545.4 400 71.2
C09p42710 Brassica napus HOM05D004576 ORTHO05D005321 5.1e-153 545.0 406 70.2
Ciclev10020388m.g Citrus clementina HOM05D004576 ORTHO05D005321 5.1e-153 545.0 412 70.6
MELO3C021489.2 Cucumis melo HOM05D004576 ORTHO05D005321 5.1e-153 545.0 402 70.1
A10p10480 Brassica napus HOM05D004576 ORTHO05D005321 6.7e-153 544.7 406 70.0
HanXRQChr07g0206441 Helianthus annuus HOM05D004576 ORTHO05D005321 8.7e-153 544.3 410 70.2
Aqoxy7G00528 Aquilegia oxysepala HOM05D004576 ORTHO05D005321 4.3e-152 542.0 405 69.9
CARHR265990 Cardamine hirsuta HOM05D004576 ORTHO05D005321 4.3e-152 542.0 406 69.7
BolC9t57147H Brassica oleracea HOM05D004576 ORTHO05D005321 5.7e-152 541.6 406 69.7
BraA10t43131Z Brassica rapa HOM05D004576 ORTHO05D005321 5.7e-152 541.6 406 69.5
ClCG09G018570 Citrullus lanatus HOM05D004576 ORTHO05D005321 5.7e-152 541.6 402 69.9
Sp6g15160 Schrenkiella parvula HOM05D004576 ORTHO05D005321 1.3e-151 540.4 401 70.6
HPP92_010727 Vanilla planifolia HOM05D004576 ORTHO05D005321 2.8e-151 539.3 400 70.5
AT5G53000 Arabidopsis thaliana HOM05D004576 ORTHO05D005321 4.8e-151 538.5 406 69.5
Sed0009575 Sechium edule HOM05D004576 ORTHO05D005321 4.8e-151 538.5 402 69.4
Os12g0137500 Oryza sativa ssp. japonica HOM05D004576 ORTHO05D005321 3.1e-150 535.8 397 68.8
PSO063G4456 Papaver somniferum HOM05D004576 ORTHO05D005321 9.0e-150 534.3 408 65.9
Potri.015G012200 Populus trichocarpa HOM05D004576 ORTHO05D005321 1.2e-149 533.9 402 69.4
unitig_748.g7294 Utricularia gibba HOM05D004576 ORTHO05D005321 4.5e-149 531.9 405 68.4
AL8G27600 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 1.0e-148 530.8 412 68.7
ATR0763G025 Amborella trichopoda HOM05D004576 ORTHO05D005321 1.3e-148 530.4 406 67.2
Lsat_1_v5_gn_2_136141 Lactuca sativa HOM05D004576 ORTHO05D005321 2.9e-148 529.3 404 70.5
Lj3C903T12 Lonicera japonica HOM05D004576 ORTHO05D005321 5.0e-148 528.5 407 70.5
AL4G21090 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 6.5e-148 528.1 406 68.5
CDE02G4477 Ceratophyllum demersum HOM05D004576 ORTHO05D005321 4.2e-147 525.4 404 67.1
Zm00001eb093250 Zea mays HOM05D004576 ORTHO05D005321 4.2e-147 525.4 397 67.0
Sed0014456 Sechium edule HOM05D004576 ORTHO05D005321 2.3e-145 519.6 402 67.9
Carub.0008s1320 Capsella rubella HOM05D004576 ORTHO05D005321 3.9e-145 518.8 406 66.0
BcaC04g20518 Brassica carinata HOM05D004576 ORTHO05D005321 6.7e-145 518.1 404 67.6
PSO170G5996 Papaver somniferum HOM05D004576 ORTHO05D005321 2.2e-143 513.1 408 64.0
PGSC0003DMG400004286 Solanum tuberosum HOM05D004576 ORTHO05D005321 2.8e-143 512.7 294 89.8
Gohir.A12G249400 Gossypium hirsutum HOM05D004576 ORTHO05D005321 6.3e-143 511.5 404 67.6
SEGI_39808 Sequoiadendron giganteum HOM05D004576 ORTHO05D005321 1.1e-139 500.7 404 62.9
Zm00001eb196410 Zea mays HOM05D004576 ORTHO05D005321 3.9e-137 492.3 399 64.7
Nitab4.5_0001620g0020 Nicotiana tabacum HOM05D004576 ORTHO05D005321 8.8e-137 491.1 442 65.8
Lsat_1_v5_gn_3_139541 Lactuca sativa HOM05D004576 ORTHO05D005321 1.5e-136 490.3 416 65.4
Sabra15G0009800 Salix brachista HOM05D004576 ORTHO05D005321 3.7e-135 485.7 403 65.0
PSO170G4165 Papaver somniferum HOM05D004576 ORTHO05D005321 2.0e-128 463.4 375 62.7
AL8G27540 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 2.2e-124 449.9 520 51.3
Glyma.06G129650 Glycine max HOM05D005525 ORTHO05D006341 1.4e-121 440.7 332 70.5
Medtr1g050518 Medicago truncatula HOM05D004576 ORTHO05D005321 2.6e-120 436.4 334 69.5
Os11g0141000 Oryza sativa ssp. japonica HOM05D004576 ORTHO05D005321 1.2e-117 427.6 376 61.2
SHI02368 Sapria himalayana HOM05D004576 ORTHO05D005321 1.8e-113 413.7 435 54.3
SMO118G0543 Selaginella moellendorffii HOM05D004576 ORTHO05D005321 8.8e-113 411.4 404 55.0
BolC2t08029H Brassica oleracea HOM05D004576 ORTHO05D005321 1.4e-110 404.1 406 57.6
Pp3c27_2200 Physcomitrium patens HOM05D004576 ORTHO05D005321 9.8e-104 381.3 406 50.5
Pp3c27_2230 Physcomitrium patens HOM05D004576 ORTHO05D005321 9.8e-104 381.3 406 50.5
AagrBONN_evm.TU.Sc2ySwM_368.1428 Anthoceros agrestis HOM05D004576 ORTHO05D005321 4.9e-95 352.4 398 49.5
CiPaw.05G197500 Carya illinoinensis HOM05D004576 ORTHO05D005321 4.1e-94 349.4 400 54.2
Mapoly0036s0077 Marchantia polymorpha HOM05D004576 ORTHO05D005321 1.1e-86 324.7 406 44.8
Dinv29270 Davidia involucrata HOM05D004576 ORTHO05D005321 9.5e-83 311.6 214 74.8
BcaC03g14466 Brassica carinata HOM05D004576 ORTHO05D005321 2.8e-82 310.1 406 48.8
MBI07_g24780_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 1.1e-67 261.5 358 45.3
CBR_g54194 Chara braunii HOM05D004576 ORTHO05D005321 3.6e-66 256.5 428 39.3
C02p18880 Brassica napus HOM05D004576 ORTHO05D005321 1.3e-60 238.0 276 52.2
MBI07_g45568_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 5.1e-60 236.1 299 46.2
AL4G21010 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 6.7e-52 209.1 148 71.6
AL4G21000 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 4.1e-41 173.3 144 64.6
SGA_v2.0_scaffold44G16809 Striga asiatica HOM05D004576 ORTHO05D005321 6.9e-33 146.0 102 74.5
CAN.G140.18 Capsicum annuum HOM05D004576 ORTHO05D005321 9.1e-25 119.0 69 87.0
Lj1g0016726 Lotus japonicus HOM05D004576 ORTHO05D005321 7.7e-24 115.9 128 51.6
Actinidia08655 Actinidia chinensis HOM05D004576 ORTHO05D005321 2.2e-23 114.4 91 65.9
ATR0602G017 Amborella trichopoda HOM05D004576 ORTHO05D005321 2.2e-23 114.4 105 55.2
MCO15G223 Micromonas commoda HOM05D004576 ORTHO05D005321 2.2e-23 114.4 411 28.2
TAR636G2906 Trochodendron aralioides HOM05D004576 ORTHO05D005321 1.2e-21 108.6 82 70.7
CSS0039200 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 7.9e-21 105.9 73 72.6
AL4G21040 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 1.8e-20 104.8 187 39.6
ATR0602G122 Amborella trichopoda HOM05D004576 ORTHO05D005321 7.7e-16 89.4 68 61.8
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 1.0e-15 89.0 85 55.3
PRCOL_00002440 Prasinoderma coloniale HOM05D004576 ORTHO05D005321 2.5e-14 84.3 441 25.2
Cfa025674 Carpinus fangiana HOM05D004576 ORTHO05D005321 4.2e-14 83.6 363 25.9
Cre09.g395621 Chlamydomonas reinhardtii HOM05D004576 ORTHO05D005321 2.0e-11 74.7 452 22.1
BcaB05g21998 Brassica carinata HOM05D004576 ORTHO05D005321 2.6e-11 74.3 259 27.4
CDE08G1665 Ceratophyllum demersum HOM05D004576 ORTHO05D005321 4.8e-10 70.1 55 67.3
Rhsim03G0259700 Rhododendron simsii HOM05D004576 ORTHO05D005321 8.5e-07 59.3 34 79.4
CAN.G73.7 Capsicum annuum HOM05D003767 ORTHO05D000047 1.9e-06 58.2 37 75.7


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