Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 7.4e-189 663.7 329 100.0
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.2e-178 629.8 329 93.9
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 2.5e-168 595.5 329 87.8
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 1.4e-166 589.7 329 87.5
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 2.0e-165 585.9 329 87.2
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 4.4e-165 584.7 329 87.2
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.6e-159 566.2 329 84.8
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 7.8e-130 467.6 330 70.9
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 3.2e-123 445.7 330 66.4
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 6.6e-121 438.0 329 67.8
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 1.9e-120 436.4 329 67.2
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 7.3e-120 434.5 329 64.4
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.8e-119 432.6 329 63.8
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 4.4e-117 425.2 329 64.7
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 4.4e-117 425.2 329 64.7
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 9.9e-117 424.1 342 61.4
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 3.2e-115 419.1 327 62.1
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 1.0e-113 414.1 330 60.9
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 6.6e-113 411.4 339 61.9
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.5e-112 410.2 328 63.7
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 8.1e-111 404.4 330 59.4
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.4e-110 403.7 329 61.1
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 4.4e-109 398.7 332 60.2
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 4.4e-109 398.7 328 60.4
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 2.2e-108 396.4 302 63.9
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 4.9e-108 395.2 332 56.9
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 1.4e-107 393.7 330 59.1
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 1.9e-107 393.3 332 56.9
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 3.2e-107 392.5 332 56.6
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 3.2e-107 392.5 329 58.1
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 3.2e-107 392.5 329 58.7
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 7.1e-107 391.3 331 62.2
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 4.6e-106 388.7 330 58.8
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 6.0e-106 388.3 329 59.0
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 6.0e-106 388.3 335 57.6
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.3e-105 387.1 342 57.9
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.7e-105 386.7 329 58.1
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.7e-105 386.7 329 58.4
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 6.6e-105 384.8 329 56.2
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.9e-104 383.3 345 55.1
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 3.3e-104 382.5 330 57.3
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 2.8e-103 379.4 331 57.7
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 2.8e-103 379.4 332 55.7
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 3.6e-103 379.0 330 56.7
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 4.8e-103 378.6 321 58.3
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 6.2e-103 378.3 334 57.5
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 8.1e-103 377.9 329 57.4
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 1.4e-102 377.1 326 56.1
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 5.3e-102 375.2 329 57.1
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.5e-101 373.6 329 56.5
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 7.6e-101 371.3 330 55.8
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 9.9e-101 370.9 329 55.3
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 2.2e-100 369.8 327 55.4
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 2.2e-100 369.8 326 56.7
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.9e-100 368.6 330 57.0
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 4.9e-100 368.6 334 56.6
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 6.4e-100 368.2 334 56.0
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 6.4e-100 368.2 327 55.4
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.1e-99 367.5 329 55.0
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 1.9e-99 366.7 327 54.1
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 2.4e-99 366.3 330 57.0
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 3.2e-99 365.9 333 55.9
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 5.4e-99 365.2 330 54.8
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 1.2e-98 364.0 330 56.4
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.2e-98 364.0 329 55.3
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.6e-98 363.6 332 58.1
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 1.0e-97 360.9 333 53.8
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 3.0e-97 359.4 335 55.2
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 9.6e-96 354.4 338 55.3
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 2.8e-95 352.8 333 53.8
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.8e-95 352.1 338 53.8
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 9.0e-94 347.8 327 54.7
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 2.0e-93 346.7 331 55.6
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 5.8e-93 345.1 378 51.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 7.6e-93 344.7 309 57.6
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 1.3e-92 344.0 329 55.0
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.9e-92 342.8 338 53.3
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.1e-91 340.9 328 54.0
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 1.1e-91 340.9 295 57.3
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.4e-91 340.5 331 53.8
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 1.9e-91 340.1 330 53.9
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 1.9e-91 340.1 304 59.2
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 2.4e-91 339.7 329 52.9
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.4e-91 339.7 329 54.1
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 4.2e-91 339.0 331 55.0
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 4.2e-91 339.0 331 55.0
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 5.6e-88 328.6 293 56.0
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 8.2e-87 324.7 290 56.2
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.9e-84 316.2 277 57.0
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 4.9e-84 315.5 334 50.6
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.9e-80 303.5 336 49.7
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 8.5e-76 288.1 331 46.8
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 6.1e-74 282.0 325 48.0
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 1.4e-73 280.8 331 49.2
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 7.4e-72 275.0 334 49.1
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 4.8e-71 272.3 268 51.5
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 8.2e-71 271.6 333 42.6
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 2.2e-68 263.5 181 72.9
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 3.8e-68 262.7 363 42.1
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.4e-67 260.8 260 51.2
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 5.5e-67 258.8 339 43.4
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.5e-64 250.8 335 43.0
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 7.7e-61 238.4 215 57.7
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.3e-60 237.7 384 38.3
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.4e-57 227.6 384 36.7
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 7.5e-48 195.3 139 66.2
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.0e-45 187.2 156 59.6
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.3e-39 167.9 133 62.4
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 2.1e-34 150.6 133 54.1
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.8e-33 147.5 204 40.2
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 3.0e-33 146.7 327 30.9
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 2.0e-32 144.1 120 60.8
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 7.5e-32 142.1 123 57.7
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 1.8e-30 137.5 117 53.8
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 1.5e-27 127.9 86 68.6
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 1.9e-27 127.5 135 51.9
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 8.3e-23 112.1 96 53.1
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 7.0e-22 109.0 140 45.0
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 6.2e-18 95.9 122 43.4
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 8.9e-17 92.0 59 72.9
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 1.4e-14 84.7 321 24.3
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 7.0e-14 82.4 67 55.2
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 1.4e-09 68.2 103 36.9
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.3e-09 67.4 50 58.0
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 1.4e-06 58.2 47 53.2


User provided reference genes

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