Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.4e-156 555.4 275 100.0
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 4.6e-144 514.6 277 93.5
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 1.4e-95 353.6 311 64.6
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 3.4e-94 349.0 309 64.1
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 5.8e-94 348.2 308 64.3
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 2.5e-89 332.8 293 67.2
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 2.9e-85 319.3 311 61.1
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 4.6e-83 312.0 292 62.7
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.1e-81 307.4 304 60.5
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 2.5e-81 306.2 303 57.8
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 2.8e-80 302.8 283 63.3
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 3.6e-80 302.4 307 58.3
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 4.7e-80 302.0 283 59.4
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 1.8e-79 300.1 297 60.3
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 2.3e-79 299.7 289 59.5
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 5.2e-79 298.5 297 58.2
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 6.8e-79 298.1 304 56.9
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.5e-78 297.0 297 57.9
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 3.4e-78 295.8 292 60.6
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.3e-77 293.9 299 56.2
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 1.3e-77 293.9 285 58.9
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 1.3e-77 293.9 297 59.6
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 3.7e-77 292.4 259 65.3
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 3.7e-77 292.4 297 57.2
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 3.7e-77 292.4 305 56.7
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 8.4e-77 291.2 290 57.9
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 4.1e-76 288.9 297 56.9
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 1.2e-75 287.3 275 58.9
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.3e-74 283.9 294 56.8
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 3.0e-74 282.7 292 58.2
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 1.1e-73 280.8 306 55.9
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 2.5e-73 279.6 294 54.1
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 9.6e-73 277.7 278 57.9
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 1.2e-72 277.3 288 53.1
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 2.8e-72 276.2 284 57.4
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 8.1e-72 274.6 283 57.2
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 1.4e-71 273.9 316 51.9
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 1.8e-71 273.5 292 54.5
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.8e-71 273.5 296 55.4
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 2.4e-71 273.1 300 54.3
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 8.9e-71 271.2 309 52.4
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 2.0e-70 270.0 297 54.2
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 3.4e-70 269.2 295 53.6
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 3.4e-70 269.2 285 55.1
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 4.4e-70 268.9 287 54.4
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 4.4e-70 268.9 287 56.1
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 9.9e-70 267.7 290 53.8
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 9.9e-70 267.7 277 56.3
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.3e-69 267.3 287 56.1
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.7e-69 266.9 310 51.6
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 2.2e-69 266.5 294 55.4
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 3.8e-69 265.8 287 55.7
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 3.8e-69 265.8 284 54.9
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 4.9e-69 265.4 344 50.3
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 6.4e-69 265.0 284 55.6
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 6.4e-69 265.0 291 53.3
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 1.1e-68 264.2 302 52.0
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 4.2e-68 262.3 285 54.7
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 5.4e-68 261.9 296 52.0
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 7.1e-68 261.5 293 51.2
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 7.1e-68 261.5 290 52.8
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 9.3e-68 261.2 283 54.8
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 9.3e-68 261.2 283 54.8
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 2.7e-67 259.6 285 55.1
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 3.5e-67 259.2 315 48.3
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 6.0e-67 258.5 302 50.3
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 7.8e-67 258.1 302 50.3
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 7.8e-67 258.1 279 54.5
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 1.3e-66 257.3 330 50.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 5.1e-66 255.4 292 53.4
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 5.6e-65 251.9 278 50.7
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 7.3e-65 251.5 295 52.9
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 9.6e-65 251.1 294 50.7
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 3.6e-64 249.2 296 51.0
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 6.2e-64 248.4 270 54.4
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 1.8e-63 246.9 335 46.9
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 4.0e-63 245.7 288 53.1
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 5.3e-63 245.4 276 54.0
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 6.9e-63 245.0 332 47.6
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 2.0e-62 243.4 272 50.4
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 7.6e-62 241.5 288 52.4
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 3.8e-61 239.2 270 53.3
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.2e-59 234.2 309 50.5
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.3e-58 230.7 377 41.6
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 5.1e-58 228.8 249 53.8
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 1.5e-57 227.3 269 50.6
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 8.1e-56 221.5 140 77.1
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 1.4e-52 210.7 261 49.0
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 9.3e-52 208.0 109 85.3
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 2.3e-50 203.4 252 48.0
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 3.9e-50 202.6 109 86.2
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 4.3e-49 199.1 114 79.8
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 6.5e-45 185.3 98 91.8
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 3.2e-44 183.0 98 84.7
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 6.0e-43 178.7 271 42.4
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 2.3e-42 176.8 293 42.7
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 4.3e-41 172.6 121 64.5
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 2.1e-40 170.2 98 79.6
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 9.0e-39 164.9 234 48.3
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 3.4e-38 162.9 94 78.7
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.4e-36 157.5 124 58.9
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 1.0e-34 151.4 98 71.4
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 1.3e-34 151.0 98 74.5
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 7.7e-30 135.2 117 61.5
Dinv35614 Davidia involucrata HOM05D006626 ORTHO05D007352 2.5e-28 130.2 211 49.3
Nitab4.5_0027058g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 9.4e-28 128.3 184 50.0
Cpa.g.sc188.15 Carica papaya HOM05D006626 ORTHO05D007352 2.1e-27 127.1 220 40.9
Psat3g141480 Pisum sativum HOM05D006626 ORTHO05D007352 7.7e-22 108.6 195 41.5
AL614U10010 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 2.3e-18 97.1 197 40.6
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 2.5e-12 77.0 82 52.4
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 1.4e-10 71.2 41 75.6
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 4.0e-10 69.7 243 32.1
MD02G1131100 Malus domestica HOM05D006626 ORTHO05D007352 3.3e-09 66.6 100 43.0
MD05G1218700 Malus domestica HOM05D006626 ORTHO05D007352 3.3e-09 66.6 100 43.0
MD15G1437500 Malus domestica HOM05D006626 ORTHO05D007352 3.3e-09 66.6 100 43.0
MD16G1182100 Malus domestica HOM05D006626 ORTHO05D007352 3.3e-09 66.6 100 43.0
AUR62042107 Chenopodium quinoa HOM05D006626 ORTHO05D007352 2.2e-08 63.9 180 36.1
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 3.7e-08 63.2 44 63.6
Aa31sc161G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.4e-07 61.2 185 33.0


User provided reference genes

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