Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 5.7e-41 170.6 95 100.0
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.0e-26 123.2 88 83.0
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.3e-26 122.1 81 87.7
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 2.0e-25 119.0 82 85.4
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 4.4e-25 117.9 85 82.4
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.4e-25 117.9 81 84.0
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.4e-25 117.9 81 85.2
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 8.2e-24 113.6 84 82.1
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 8.2e-24 113.6 82 81.7
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 1.5e-20 102.8 105 64.8
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 1.4e-18 96.3 103 63.1
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 1.4e-18 96.3 76 75.0
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 2.3e-18 95.5 78 73.1
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 3.0e-18 95.1 83 72.3
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 3.4e-17 91.7 102 61.8
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 5.7e-17 90.9 78 70.5
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 1.3e-16 89.7 78 69.2
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 1.7e-16 89.4 76 71.1
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 8.3e-16 87.0 78 61.5
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 8.3e-16 87.0 78 61.5
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.4e-15 86.3 77 68.8
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 1.6e-14 82.8 82 63.4
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 2.0e-14 82.4 79 64.6
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.0e-14 82.4 93 55.9
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 5.9e-14 80.9 89 61.8
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 7.7e-14 80.5 97 55.7
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 1.7e-13 79.3 88 58.0
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 3.8e-13 78.2 86 53.5
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 5.0e-13 77.8 79 62.0
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 5.0e-13 77.8 93 53.8
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 1.1e-12 76.6 81 55.6
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 1.1e-12 76.6 86 53.5
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.1e-12 76.6 80 51.2
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 1.9e-12 75.9 80 51.2
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.5e-12 75.5 88 59.1
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.5e-12 75.5 88 59.1
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 3.2e-12 75.1 82 56.1
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 3.2e-12 75.1 89 56.2
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 5.5e-12 74.3 80 56.2
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 5.5e-12 74.3 90 53.3
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 9.5e-12 73.6 78 59.0
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.2e-11 73.2 90 51.1
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.2e-11 73.2 81 50.6
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.6e-11 72.8 88 58.0
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.6e-11 72.8 88 58.0
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.8e-11 72.0 93 53.8
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 3.6e-11 71.6 81 55.6
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 3.6e-11 71.6 79 51.9
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 6.1e-11 70.9 90 50.0
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 8.0e-11 70.5 96 53.1
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 8.0e-11 70.5 70 65.7
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 8.0e-11 70.5 84 51.2
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 8.0e-11 70.5 95 48.4
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 1.0e-10 70.1 80 52.5
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 1.0e-10 70.1 86 54.7
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 1.0e-10 70.1 86 50.0
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 1.0e-10 70.1 81 55.6
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.4e-10 69.7 74 59.5
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 1.4e-10 69.7 80 53.8
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 1.8e-10 69.3 79 58.2
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 1.8e-10 69.3 98 46.9
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 2.3e-10 68.9 52 71.2
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 2.3e-10 68.9 95 50.5
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 3.0e-10 68.6 57 66.7
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 3.0e-10 68.6 88 51.1
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 3.0e-10 68.6 89 47.2
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 4.0e-10 68.2 89 55.1
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 4.0e-10 68.2 57 64.9
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 1.2e-09 66.6 69 59.4
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 1.2e-09 66.6 69 59.4
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 1.2e-09 66.6 69 59.4
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 1.2e-09 66.6 80 53.8
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 1.2e-09 66.6 90 50.0
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 1.5e-09 66.2 84 51.2
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 1.5e-09 66.2 78 50.0
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 1.5e-09 66.2 90 50.0
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 2.0e-09 65.9 58 65.5
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 2.0e-09 65.9 74 56.8
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 2.0e-09 65.9 85 48.2
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 2.6e-09 65.5 75 57.3
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 2.6e-09 65.5 80 50.0
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 2.6e-09 65.5 73 56.2
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 2.6e-09 65.5 65 60.0
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 3.4e-09 65.1 78 57.7
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 3.4e-09 65.1 78 57.7
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 3.4e-09 65.1 78 57.7
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 3.4e-09 65.1 78 57.7
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 3.4e-09 65.1 65 58.5
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 3.4e-09 65.1 66 54.5
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 7.5e-09 63.9 85 51.8
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 7.5e-09 63.9 38 78.9
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 9.8e-09 63.5 79 53.2
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 1.3e-08 63.2 47 63.8
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 1.3e-08 63.2 68 57.4
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 1.3e-08 63.2 78 48.7
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 2.2e-08 62.4 81 49.4
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 6.3e-08 60.8 78 52.6
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 6.3e-08 60.8 46 60.9
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 6.3e-08 60.8 46 60.9
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 6.3e-08 60.8 52 63.5
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.1e-07 60.1 78 51.3
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 1.8e-07 59.3 40 67.5
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 1.8e-07 59.3 83 45.8
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 1.8e-07 59.3 46 58.7
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 2.4e-07 58.9 41 68.3
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 3.1e-07 58.5 87 49.4
ClCG03G006550 Citrullus lanatus HOM05D006325 ORTHO05D007878 4.1e-07 58.2 83 47.0
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 4.1e-07 58.2 46 56.5
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 7.0e-07 57.4 82 46.3
Aa31LG6G3080 Aethionema arabicum HOM05D012071 ORTHO05D013970 9.2e-07 57.0 44 70.5
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.2e-06 56.6 63 57.1
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.2e-06 56.6 64 54.7
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.2e-06 56.6 64 54.7
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 1.6e-06 56.2 82 46.3
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 3.5e-06 55.1 83 49.4
CsaV3_1G036810 Cucumis sativus L. HOM05D006325 ORTHO05D007878 5.9e-06 54.3 78 46.2
AT4G21060 Arabidopsis thaliana HOM05D000777 ORTHO05D000595 7.8e-06 53.9 41 73.2
BcaC09g51267 Brassica carinata HOM05D012071 ORTHO05D013970 7.8e-06 53.9 39 76.9
BcaNung04703 Brassica carinata HOM05D012071 ORTHO05D013970 7.8e-06 53.9 39 76.9
A01p12410 Brassica napus HOM05D000777 ORTHO05D000595 7.8e-06 53.9 39 76.9
A03p52620 Brassica napus HOM05D012071 ORTHO05D013970 7.8e-06 53.9 39 76.9
C07p51060 Brassica napus HOM05D012071 ORTHO05D013970 7.8e-06 53.9 39 76.9
BolC1t01447H Brassica oleracea HOM05D000777 ORTHO05D000595 7.8e-06 53.9 39 76.9
BraA01t01187Z Brassica rapa HOM05D000777 ORTHO05D000595 7.8e-06 53.9 39 76.9
BraA03t14336Z Brassica rapa HOM05D012071 ORTHO05D013970 7.8e-06 53.9 39 76.9
Thhalv10026664m.g Eutrema salsugineum HOM05D012071 ORTHO05D013970 7.8e-06 53.9 41 73.2
Sp7g19100 Schrenkiella parvula HOM05D012071 ORTHO05D013970 7.8e-06 53.9 39 76.9


User provided reference genes

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