Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.9e-178 629.0 316 100.0
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 2.9e-166 588.6 316 94.0
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 1.3e-150 536.6 314 84.7
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 2.1e-148 529.3 314 84.4
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 6.1e-148 527.7 314 84.1
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 2.4e-144 515.8 314 81.8
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 3.5e-111 405.6 316 62.3
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 2.5e-109 399.4 315 61.0
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 4.0e-107 392.1 321 59.5
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 6.8e-107 391.3 316 62.3
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 2.4e-104 382.9 314 61.8
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 9.2e-104 380.9 323 61.3
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 9.2e-104 380.9 314 60.5
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 7.8e-103 377.9 323 59.4
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.5e-101 373.6 316 59.5
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 2.5e-101 372.9 315 59.4
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.1e-99 367.5 322 57.5
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 2.6e-98 362.8 316 59.2
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 2.6e-98 362.8 322 55.3
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 3.4e-98 362.5 322 57.8
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 4.4e-98 362.1 314 57.0
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 7.6e-98 361.3 316 57.6
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 7.6e-98 361.3 325 57.2
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 2.9e-97 359.4 322 58.1
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 3.7e-97 359.0 316 56.3
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 6.4e-97 358.2 321 57.0
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.4e-96 357.1 322 55.6
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 1.9e-96 356.7 316 57.9
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 5.4e-96 355.1 321 59.5
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 7.1e-96 354.8 318 58.5
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 7.1e-96 354.8 321 59.5
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 1.2e-95 354.0 314 56.1
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 1.7e-94 350.1 314 55.4
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.3e-94 349.7 322 56.5
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 3.0e-94 349.4 314 56.1
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 6.6e-94 348.2 317 54.3
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 8.6e-94 347.8 321 55.5
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 2.5e-93 346.3 322 55.9
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 4.3e-93 345.5 316 57.0
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 4.3e-93 345.5 318 60.1
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 4.3e-93 345.5 369 51.5
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 5.6e-93 345.1 322 53.4
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 9.6e-93 344.4 320 56.2
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 1.2e-92 344.0 321 53.0
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.6e-92 343.6 317 56.8
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 1.6e-92 343.6 322 52.8
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 8.1e-92 341.3 316 53.5
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 1.8e-91 340.1 316 57.6
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 4.0e-91 339.0 318 53.1
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 8.9e-91 337.8 321 57.0
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 2.6e-90 336.3 315 54.3
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 7.8e-87 324.7 320 52.5
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 7.8e-87 324.7 319 53.3
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 3.0e-86 322.8 320 52.8
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 6.6e-86 321.6 320 51.6
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 1.1e-85 320.9 317 51.4
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 1.5e-85 320.5 324 51.9
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 4.3e-85 318.9 323 51.1
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 5.6e-85 318.5 321 49.8
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 9.6e-85 317.8 318 52.8
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 1.6e-84 317.0 315 51.7
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.1e-84 316.6 314 52.2
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 2.8e-84 316.2 315 51.7
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 2.8e-84 316.2 321 50.2
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 4.8e-84 315.5 318 52.5
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 4.8e-84 315.5 316 53.2
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 1.4e-83 313.9 321 50.2
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 4.4e-82 308.9 315 50.8
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 5.8e-82 308.5 315 48.9
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.3e-81 307.4 316 49.7
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 1.7e-81 307.0 315 51.1
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 1.9e-80 303.5 314 51.0
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 1.9e-80 303.5 324 50.6
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.6e-79 300.4 396 46.2
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 2.1e-79 300.1 314 49.4
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 4.6e-79 298.9 317 49.8
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 4.6e-79 298.9 314 49.4
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 4.6e-79 298.9 321 49.8
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 5.1e-78 295.4 314 49.0
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 4.3e-77 292.4 316 49.7
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 3.6e-76 289.3 316 48.7
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 4.8e-76 288.9 315 46.3
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 5.3e-75 285.4 323 48.0
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.5e-74 283.9 440 41.1
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 2.6e-74 283.1 314 49.4
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 1.1e-72 277.7 325 46.5
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 5.4e-72 275.4 270 53.3
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 2.1e-71 273.5 334 44.6
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 5.1e-70 268.9 339 42.5
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 6.7e-70 268.5 234 57.3
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 4.3e-69 265.8 258 56.2
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 1.3e-68 264.2 323 45.2
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 1.2e-66 257.7 276 47.5
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 1.5e-66 257.3 314 45.9
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 2.6e-66 256.5 241 53.1
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 3.8e-65 252.7 269 50.6
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 4.2e-64 249.2 315 45.1
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 7.1e-64 248.4 315 46.3
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 2.1e-63 246.9 268 48.5
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 3.5e-63 246.1 260 52.7
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 3.0e-62 243.0 326 42.6
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 5.1e-62 242.3 293 44.4
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 3.7e-60 236.1 228 52.2
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 1.8e-59 233.8 297 44.1
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.1e-59 232.6 291 49.1
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 3.4e-58 229.6 336 40.8
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.7e-57 227.3 222 53.2
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 3.8e-57 226.1 253 46.6
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 9.3e-56 221.5 341 41.3
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 1.5e-53 214.2 163 59.5
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.3e-52 211.1 335 38.2
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 3.7e-52 209.5 323 37.8
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 5.3e-51 205.7 415 35.7
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 9.0e-51 204.9 278 41.7
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 8.5e-49 198.4 315 37.5
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 9.4e-48 194.9 308 38.0
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 1.6e-47 194.1 335 38.2
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 8.2e-44 181.8 326 36.2
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 7.7e-42 175.3 262 39.7
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 1.0e-41 174.9 195 45.6
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 3.7e-36 156.4 319 34.5
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 1.5e-32 144.4 239 38.5
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 2.9e-17 93.6 55 76.4
CSS0029180 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 2.1e-15 87.4 69 63.8
CSS0023315 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 4.7e-15 86.3 47 80.9
CARHR201360 Cardamine hirsuta HOM05D006276 ORTHO05D007724 4.1e-11 73.2 46 71.7
Lj7A276T16 Lonicera japonica HOM05D006276 ORTHO05D007724 2.7e-10 70.5 49 67.3


User provided reference genes

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