Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 0.0e+00 2257.3 1146 100.0
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 0.0e+00 2061.6 1142 93.0
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 0.0e+00 1529.6 1181 69.9
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 0.0e+00 1440.6 1526 55.2
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 0.0e+00 1419.8 1526 54.7
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 0.0e+00 1343.2 1417 56.2
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 2.7e-177 627.1 1230 37.8
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.6e-169 601.3 1241 35.3
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 8.6e-168 595.5 1312 34.7
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 3.6e-166 590.1 1220 36.0
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 9.9e-164 582.0 1306 34.1
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 1.7e-163 581.3 1329 34.2
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 2.4e-162 577.4 1251 34.8
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 3.9e-160 570.1 1297 33.8
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 1.9e-159 567.8 1276 34.5
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 4.7e-158 563.1 1359 32.3
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 4.0e-157 560.1 1210 33.5
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 1.5e-156 558.1 1298 33.9
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 3.3e-151 540.4 1267 33.1
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 4.5e-148 530.0 1271 33.9
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 2.4e-146 524.2 1310 32.2
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 3.2e-146 523.9 1223 33.5
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 3.5e-145 520.4 1299 34.9
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 2.3e-144 517.7 1234 34.6
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 3.6e-142 510.4 1290 33.8
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 5.3e-141 506.5 1196 32.5
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 6.9e-141 506.1 1336 31.9
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 3.4e-140 503.8 1334 31.6
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 9.9e-140 502.3 1405 30.6
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 5.5e-138 496.5 1302 31.7
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 5.1e-136 490.0 1189 32.6
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 1.5e-135 488.4 1451 30.0
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 8.1e-134 482.6 1249 31.5
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 1.4e-133 481.9 1201 32.0
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 2.4e-133 481.1 1303 31.1
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 4.0e-133 480.3 1343 31.1
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 2.6e-132 477.6 1345 31.6
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 4.2e-130 470.3 1337 30.6
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 7.9e-129 466.1 1302 31.7
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 5.1e-128 463.4 1334 32.2
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 8.7e-128 462.6 1273 32.5
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 1.3e-126 458.8 1237 30.6
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 2.8e-126 457.6 1385 30.2
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 3.7e-126 457.2 1265 31.9
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 3.7e-126 457.2 1164 33.2
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 3.7e-126 457.2 1261 31.6
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 2.6e-124 451.1 1386 30.2
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 1.3e-123 448.7 1244 32.6
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 3.8e-123 447.2 1249 30.3
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 3.8e-123 447.2 1198 32.1
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 9.3e-122 442.6 1261 31.0
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 1.6e-121 441.8 1213 30.8
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 3.6e-121 440.7 1246 30.3
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 7.4e-119 433.0 1314 30.8
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 3.7e-118 430.6 1305 29.7
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 4.8e-118 430.3 1261 30.5
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 4.1e-117 427.2 1413 29.2
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 1.2e-116 425.6 1274 30.2
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 4.5e-116 423.7 1332 29.4
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 7.7e-116 422.9 1246 30.1
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 1.7e-115 421.8 1297 29.1
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 2.9e-115 421.0 1346 29.3
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 3.8e-115 420.6 1273 29.9
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 1.1e-114 419.1 1331 29.0
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 1.1e-114 419.1 1331 29.0
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 4.6e-113 413.7 1485 28.5
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 1.0e-112 412.5 1344 28.9
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 5.7e-111 406.8 1177 30.5
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 1.7e-110 405.2 1291 29.4
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 2.8e-110 404.4 1356 28.7
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 4.8e-110 403.7 1340 29.6
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 8.2e-110 402.9 1239 29.7
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 1.2e-105 389.0 1225 30.4
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 6.7e-104 383.3 1599 27.1
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 1.5e-103 382.1 1235 29.8
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 1.0e-99 369.4 1276 28.6
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 7.2e-98 363.2 1198 29.0
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 2.3e-96 358.2 1163 28.9
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 4.4e-95 354.0 1199 28.7
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 4.8e-94 350.5 1203 29.2
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 5.9e-92 343.6 1563 25.9
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 3.6e-89 334.3 1046 30.0
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 1.5e-87 328.9 982 29.7
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 8.3e-86 323.2 925 32.1
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.1e-85 322.8 925 32.1
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 1.8e-85 322.0 1177 27.3
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 7.0e-85 320.1 898 29.7
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 1.2e-84 319.3 1194 28.2
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 7.7e-84 316.6 1349 27.5
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 8.6e-83 313.2 759 33.2
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 3.2e-82 311.2 933 28.9
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 2.3e-80 305.1 1251 25.7
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 2.8e-78 298.1 672 35.6
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 5.0e-75 287.3 1239 25.8
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 1.2e-73 282.7 635 32.1
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 1.3e-70 272.7 515 38.1
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 2.4e-69 268.5 1252 25.2
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.5e-68 264.6 757 30.1
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 2.2e-62 245.4 1237 24.3
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 2.8e-57 228.4 209 59.3
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.4e-56 226.1 367 42.8
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.1e-56 224.9 209 57.9
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.7e-54 219.2 363 37.5
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 6.4e-54 217.2 382 35.3
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 1.3e-51 209.5 286 40.9
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 3.9e-51 208.0 441 35.4
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 8.6e-51 206.8 276 41.3
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.1e-48 199.9 262 46.6
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 6.2e-41 174.1 108 74.1
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 1.4e-40 172.9 486 26.7
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 9.3e-37 160.2 216 40.3
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.7e-35 156.0 108 68.5
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.3e-33 149.8 116 62.9
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 3.4e-31 141.7 140 48.6
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 8.7e-27 127.1 220 36.8
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 4.3e-26 124.8 90 67.8
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.8e-24 119.4 177 41.2
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 2.4e-24 119.0 82 67.1
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.2e-21 108.2 153 41.8
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.2e-20 106.7 76 67.1
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 3.9e-19 101.7 149 41.6
SHI10799 Sapria himalayana HOM05D004942 ORTHO05D005687 5.3e-16 91.3 84 54.8
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.9e-13 82.8 67 62.7
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 4.6e-12 78.2 66 60.6
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 8.7e-11 73.9 66 57.6
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 5.7e-10 71.2 83 47.0
Eucgr.G02429 Eucalyptus grandis HOM05D004942 ORTHO05D005687 5.7e-10 71.2 67 49.3
Actinidia27213 Actinidia chinensis HOM05D004942 ORTHO05D005687 6.3e-09 67.8 241 30.7
SEGI_38362 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 4.1e-08 65.1 131 32.1
MCO07G070 Micromonas commoda HOM05D004942 ORTHO05D005687 2.0e-07 62.8 123 27.6
SHI10795 Sapria himalayana HOM05D004942 ORTHO05D005687 2.0e-07 62.8 64 45.3
Cc00_g10020 Coffea canephora HOM05D000590 ORTHO05D005739 5.9e-07 61.2 142 31.7
Oeu028721.1 Olea europaea HOM05D004942 ORTHO05D005687 3.8e-06 58.5 109 38.5


User provided reference genes

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