Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.7e-244 848.2 416 100.0
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.1e-217 758.8 392 95.2
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 5.7e-194 681.0 433 78.3
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.8e-193 677.9 436 77.1
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 6.3e-193 677.6 422 80.1
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 6.9e-192 674.1 435 76.6
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.0e-174 617.1 441 68.3
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 2.8e-169 599.0 470 66.2
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 1.1e-168 597.0 417 72.4
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 9.1e-168 594.0 428 67.5
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.7e-166 589.7 428 66.1
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 6.8e-163 577.8 430 67.7
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 8.8e-163 577.4 433 66.3
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.2e-162 577.0 414 69.1
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.0e-162 576.2 420 65.7
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 9.8e-162 573.9 434 65.0
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.8e-161 572.4 425 65.6
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.2e-159 567.0 434 64.1
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.2e-159 567.0 430 67.2
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 2.7e-159 565.8 445 62.7
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 3.5e-159 565.5 437 64.3
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 3.5e-159 565.5 437 66.1
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.3e-158 563.5 425 64.7
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 5.0e-158 561.6 437 63.4
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 2.5e-157 559.3 436 63.3
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 3.2e-157 558.9 427 63.2
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 3.2e-157 558.9 431 62.9
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 4.2e-157 558.5 424 63.4
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 5.5e-157 558.1 415 67.2
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 5.5e-157 558.1 437 62.7
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 7.2e-157 557.8 319 85.3
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 9.5e-157 557.4 421 63.9
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.6e-156 556.6 429 63.6
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.6e-156 556.6 438 61.0
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.7e-156 555.8 427 62.8
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 3.6e-156 555.4 427 62.5
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 6.1e-156 554.7 427 63.7
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.4e-155 553.5 352 72.7
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 1.8e-155 553.1 417 64.3
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.3e-155 552.7 434 61.1
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 3.0e-155 552.4 435 63.2
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.2e-154 550.4 434 63.8
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 2.6e-154 549.3 413 63.7
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 2.6e-154 549.3 418 63.4
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 5.7e-154 548.1 405 65.2
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 9.8e-154 547.4 444 60.8
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 1.3e-153 547.0 417 66.2
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 1.7e-153 546.6 347 73.2
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 2.2e-153 546.2 430 61.2
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 8.3e-153 544.3 434 61.8
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 8.3e-153 544.3 447 60.4
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 8.3e-153 544.3 434 62.2
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.4e-152 543.5 435 61.4
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 3.1e-152 542.3 424 61.8
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 4.1e-152 542.0 424 62.0
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 4.1e-152 542.0 449 60.4
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.2e-151 540.4 410 62.9
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 4.5e-151 538.5 416 64.7
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.9e-151 538.1 410 62.9
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 7.7e-151 537.7 418 63.4
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.0e-150 537.3 452 61.9
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.3e-150 537.0 421 61.5
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.7e-150 536.6 423 61.2
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 2.9e-150 535.8 430 60.7
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 6.6e-150 534.6 430 60.5
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 6.6e-150 534.6 420 62.1
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.5e-149 533.5 415 62.2
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 9.5e-149 530.8 425 60.5
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 9.5e-149 530.8 418 61.0
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.2e-148 530.4 428 61.2
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.6e-148 530.0 347 71.2
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 2.1e-148 529.6 385 67.8
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 2.1e-148 529.6 347 70.3
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 1.0e-147 527.3 347 71.2
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 1.0e-147 527.3 347 71.2
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 1.0e-147 527.3 347 71.2
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 1.4e-147 526.9 347 71.8
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 3.0e-147 525.8 416 62.5
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 3.0e-147 525.8 419 60.9
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 5.2e-147 525.0 374 68.2
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 3.4e-146 522.3 374 67.9
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 5.7e-146 521.5 419 60.4
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 7.5e-146 521.2 352 69.3
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.2e-145 519.6 410 61.2
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 4.9e-145 518.5 400 62.2
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 6.4e-145 518.1 411 60.3
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 8.3e-145 517.7 413 60.3
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 1.8e-144 516.5 407 62.7
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.4e-144 516.2 410 60.7
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.2e-143 513.8 419 60.1
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 2.0e-143 513.1 408 61.8
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 2.0e-143 513.1 408 61.8
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 2.0e-143 513.1 408 61.8
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 4.6e-143 511.9 405 61.7
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 5.9e-143 511.5 346 68.8
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 5.9e-143 511.5 427 59.0
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 1.3e-142 510.4 395 61.3
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 1.7e-142 510.0 405 61.7
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 2.3e-142 509.6 408 61.3
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 3.9e-142 508.8 430 57.9
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 8.6e-142 507.7 345 67.2
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.9e-141 506.5 454 55.9
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.9e-141 506.5 404 59.4
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.6e-140 503.4 410 59.5
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.1e-140 503.1 417 59.0
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.8e-140 502.7 408 60.5
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 4.7e-140 501.9 332 69.9
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 6.2e-140 501.5 422 57.8
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.4e-139 500.4 356 63.8
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.4e-139 500.4 410 58.8
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.8e-139 500.0 408 59.3
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.8e-139 500.0 397 61.0
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 3.1e-139 499.2 437 57.0
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 3.1e-139 499.2 346 65.9
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.9e-136 490.0 406 58.9
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 2.4e-136 489.6 399 59.6
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 2.0e-130 469.9 433 55.7
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 8.3e-129 464.5 450 54.7
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-128 464.2 394 57.1
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 4.1e-128 462.2 409 56.5
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 3.5e-127 459.1 347 60.5
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 7.3e-125 451.4 392 56.6
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.6e-124 450.3 416 51.2
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 4.7e-124 448.7 394 56.6
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 4.7e-124 448.7 420 54.5
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.7e-124 448.7 344 60.8
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 2.6e-122 443.0 384 57.8
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 7.6e-122 441.4 417 54.4
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-121 440.7 416 55.0
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-121 438.7 432 52.1
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-120 437.2 387 57.1
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.9e-120 436.8 425 53.4
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 1.6e-119 433.7 357 59.4
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-118 431.0 417 54.2
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 5.6e-117 425.2 289 67.5
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 6.2e-116 421.8 447 51.2
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 8.1e-116 421.4 424 51.7
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 4.4e-114 415.6 385 52.2
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.3e-113 414.1 385 52.5
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.2e-112 409.5 291 64.9
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.5e-109 400.6 251 72.1
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 3.6e-108 396.0 342 55.6
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 6.9e-107 391.7 371 52.3
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.2e-106 391.0 384 50.3
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.2e-105 386.7 342 53.8
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 4.2e-104 382.5 428 46.3
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.0e-102 376.3 250 65.2
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 9.6e-101 371.3 305 57.4
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 6.9e-99 365.2 385 49.1
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 9.3e-96 354.8 341 49.6
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 9.3e-96 354.8 240 66.7
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 1.2e-95 354.4 240 67.1
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.0e-94 351.3 339 50.1
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.5e-93 346.7 340 48.2
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.6e-90 336.7 340 48.2
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 1.0e-89 334.7 236 63.1
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.2e-89 333.6 348 46.8
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 5.5e-88 328.9 302 57.9
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 3.0e-86 323.2 236 60.6
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.5e-82 310.8 389 45.0
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.5e-80 302.4 347 45.0
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.0e-78 298.1 298 49.0
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.7e-77 292.4 348 42.2
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.2e-76 290.4 343 40.5
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 6.9e-75 285.4 341 41.9
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-73 280.8 344 41.3
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.2e-73 280.4 346 39.6
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-72 278.1 240 52.5
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.4e-64 251.1 347 38.6
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 7.7e-58 228.8 356 35.7
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 2.1e-39 167.5 420 29.5
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.8e-39 167.2 149 57.0
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 1.4e-38 164.9 154 55.2
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 1.9e-24 117.9 85 56.5
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.9e-22 109.0 114 43.9
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.3e-20 102.4 116 39.7
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.4e-19 101.7 138 46.4
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 2.0e-18 97.8 81 46.9
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.1e-15 87.8 100 40.0
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.7e-10 70.9 139 38.1
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.9e-08 64.7 39 76.9
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 8.1e-07 59.3 47 63.8


User provided reference genes

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