Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 2.6e-53 211.8 110 100.0
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 9.2e-51 203.4 110 96.4
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 6.1e-47 190.7 105 95.2
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 6.1e-47 190.7 105 95.2
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 1.8e-46 189.1 105 94.3
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 6.4e-44 180.6 105 90.5
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.9e-35 152.5 102 77.5
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 5.4e-35 151.0 105 74.3
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 3.5e-34 148.3 102 76.5
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 1.0e-33 146.7 105 71.4
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 1.7e-33 146.0 106 73.6
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 5.0e-33 144.4 101 73.3
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 8.6e-33 143.7 110 71.8
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 1.5e-32 142.9 103 68.0
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 1.9e-32 142.5 102 72.5
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 2.5e-32 142.1 106 69.8
TAR629G2292 Trochodendron aralioides HOM05D007328 ORTHO05D009246 4.3e-32 141.4 102 72.5
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 4.3e-32 141.4 99 75.8
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 2.1e-31 139.0 96 74.0
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 6.2e-31 137.5 103 73.8
Cc04_g10870 Coffea canephora HOM05D007328 ORTHO05D009246 8.1e-31 137.1 102 69.6
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 8.1e-31 137.1 105 70.5
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 1.1e-30 136.7 101 71.3
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 2.3e-30 135.6 101 69.3
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 5.2e-30 134.4 103 68.0
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 5.2e-30 134.4 103 69.9
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 8.9e-30 133.7 103 71.8
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 8.9e-30 133.7 103 68.9
Ciclev10022963m.g Citrus clementina HOM05D007328 ORTHO05D009246 1.5e-29 132.9 110 66.4
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 1.5e-29 132.9 106 67.0
COL.COLO4_19806 Corchorus olitorius HOM05D007328 ORTHO05D009246 3.4e-29 131.7 102 71.6
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.4e-29 131.7 107 69.2
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 5.8e-29 131.0 102 68.6
Hma1.2p1_2431F.1_g322030 Hydrangea macrophylla HOM05D007328 ORTHO05D009246 9.9e-29 130.2 100 71.0
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 9.9e-29 130.2 104 68.3
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 1.3e-28 129.8 107 68.2
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.7e-28 129.4 107 68.2
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 2.2e-28 129.0 107 67.3
Duzib068G0271 Durio zibethinus HOM05D007328 ORTHO05D009246 3.7e-28 128.3 99 65.7
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 4.9e-28 127.9 102 67.6
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 6.4e-28 127.5 99 66.7
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 6.4e-28 127.5 100 67.0
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.1e-27 126.7 101 68.3
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 2.4e-27 125.6 106 65.1
Gorai.006G269700 Gossypium raimondii HOM05D007328 ORTHO05D009246 3.2e-27 125.2 107 62.6
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 3.2e-27 125.2 101 67.3
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 4.1e-27 124.8 99 65.7
Gohir.A09G244400 Gossypium hirsutum HOM05D007328 ORTHO05D009246 7.1e-27 124.0 107 62.6
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 7.1e-27 124.0 101 66.3
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 1.2e-26 123.2 103 65.0
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 2.1e-26 122.5 102 63.7
Gohir.D09G245301 Gossypium hirsutum HOM05D007328 ORTHO05D009246 3.5e-26 121.7 107 60.7
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 6.0e-26 120.9 108 60.2
SalBow6G3374 Salvia bowleyana HOM05D007328 ORTHO05D009246 6.0e-26 120.9 96 69.8
THA.LOC104809276 Tarenaya hassleriana HOM05D007328 ORTHO05D009246 6.0e-26 120.9 99 63.6
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 7.8e-26 120.6 105 61.9
MELO3C026242.2 Cucumis melo HOM05D007328 ORTHO05D009246 1.0e-25 120.2 106 65.1
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 1.7e-25 119.4 108 59.3
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 2.3e-25 119.0 105 61.0
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 2.3e-25 119.0 105 61.0
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 2.3e-25 119.0 105 61.0
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 3.0e-25 118.6 104 61.5
Lj4g0027684 Lotus japonicus HOM05D007328 ORTHO05D009246 3.9e-25 118.2 103 61.2
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 5.1e-25 117.9 105 60.0
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 5.1e-25 117.9 105 60.0
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 6.6e-25 117.5 105 59.0
Glyma.05G043400 Glycine max HOM05D007328 ORTHO05D009246 8.6e-25 117.1 103 61.2
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 1.1e-24 116.7 102 64.7
arahy.Tifrunner.gnm1.ann1.RLPB8M Arachis hypogaea HOM05D007328 ORTHO05D009246 1.5e-24 116.3 102 60.8
Ca_19431_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 1.5e-24 116.3 103 59.2
SHI17354 Sapria himalayana HOM05D007328 ORTHO05D009246 2.5e-24 115.5 104 60.6
arahy.Tifrunner.gnm1.ann1.VT7US1 Arachis hypogaea HOM05D007328 ORTHO05D009246 3.3e-24 115.2 102 60.8
FAN08G2248 Fragaria x ananassa HOM05D007328 ORTHO05D009246 3.3e-24 115.2 124 56.5
HanXRQChr08g0235201 Helianthus annuus HOM05D007328 ORTHO05D009246 4.3e-24 114.8 98 63.3
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 1.6e-23 112.8 116 57.8
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 2.1e-23 112.5 99 61.6
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 2.1e-23 112.5 105 57.1
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 2.8e-23 112.1 103 58.3
CSS0030634 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 8.1e-23 110.5 100 61.0
unitig_62.g23226 Utricularia gibba HOM05D007328 ORTHO05D009246 1.1e-22 110.2 98 64.3
Phvul.003G206900 Phaseolus vulgaris HOM05D007328 ORTHO05D009246 2.4e-22 109.0 103 56.3
TPR.G37571 Trifolium pratense HOM05D007328 ORTHO05D009246 3.1e-22 108.6 105 58.1
Lalb_Chr07g0183141 Lupinus albus HOM05D007328 ORTHO05D009246 6.8e-22 107.5 103 56.3
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 5.8e-21 104.4 107 55.1
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 7.6e-21 104.0 101 57.4
vmacro16689 Vaccinium macrocarpon HOM05D007328 ORTHO05D009246 9.9e-21 103.6 67 80.6
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 2.9e-20 102.1 102 58.8
Psat4g062040 Pisum sativum HOM05D007328 ORTHO05D009246 1.4e-19 99.8 89 61.8
Sabra12G0065400 Salix brachista HOM05D007328 ORTHO05D009246 1.9e-19 99.4 81 69.1
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 1.6e-18 96.3 67 77.6
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 1.0e-17 93.6 67 76.1
Nn3g16640 Nelumbo nucifera HOM05D007328 ORTHO05D009246 1.7e-17 92.8 68 66.2
Ca_30674_v3 Cicer arietinum L. HOM05D007328 ORTHO05D009246 5.1e-17 91.3 67 73.1
BolC6t40286H Brassica oleracea HOM05D007328 ORTHO05D009246 2.5e-16 89.0 79 64.6
QL10p005934 Quercus lobata HOM05D007328 ORTHO05D009246 3.3e-16 88.6 64 71.9
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 5.6e-16 87.8 63 74.6
C03p92780 Brassica napus HOM05D007328 ORTHO05D009246 7.3e-16 87.4 79 63.3
SEGI_23865 Sequoiadendron giganteum HOM05D007328 ORTHO05D009246 9.6e-16 87.0 66 71.2
MBI10_g15972_MAGBIO Magnolia biondii HOM05D007328 ORTHO05D009246 4.7e-15 84.7 64 71.9
Atru.chr9.1808 Acer truncatum HOM05D007328 ORTHO05D009246 8.1e-15 84.0 53 86.8
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 3.1e-14 82.0 85 54.1
Thhalv10019789m.g Eutrema salsugineum HOM05D007328 ORTHO05D009246 9.0e-14 80.5 52 84.6
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 2.0e-13 79.3 50 86.0
Actinidia08840 Actinidia chinensis HOM05D007328 ORTHO05D009246 3.4e-13 78.6 50 84.0
ECA233G5563 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.7e-12 76.3 53 81.1
SMO203G0244 Selaginella moellendorffii HOM05D007328 ORTHO05D009246 3.2e-11 72.0 53 71.7
CSS0039715 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 8.7e-09 63.9 39 82.1
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 1.6e-07 59.7 101 35.6


User provided reference genes

Program Settings