Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.1e-169 599.7 284 100.0
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 6.2e-83 311.6 298 54.7
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.4e-82 310.5 260 61.5
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 4.0e-82 308.9 265 61.1
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.0e-73 280.0 285 52.6
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 6.8e-66 255.0 254 52.8
Nitab4.5_0024035g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.6e-62 243.8 217 60.8
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 6.6e-61 238.4 247 51.8
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.4e-55 220.7 326 42.0
Nitab4.5_0004281g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.0e-53 214.5 208 53.4
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.3e-52 209.1 308 43.2
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.8e-51 206.5 343 38.5
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 3.6e-51 206.1 304 42.4
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 9.0e-50 201.4 292 43.2
PGSC0003DMG400045355 Solanum tuberosum HOM05D007354 ORTHO05D006294 8.4e-48 194.9 381 34.9
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 7.9e-46 188.3 175 53.7
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.3e-44 182.6 325 37.8
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 5.6e-44 182.2 193 52.3
Sopen09g003390 Solanum pennellii HOM05D007354 ORTHO05D006294 1.3e-43 181.0 183 50.8
Nitab4.5_0026971g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 6.2e-43 178.7 86 94.2
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 8.1e-43 178.3 179 50.8
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 5.3e-42 175.6 346 37.0
Nitab4.5_0004281g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.4e-41 172.9 216 48.1
Nitab4.5_0011155g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.5e-39 165.6 183 49.7
Peaxi162Scf01233g00008 Petunia axillaris HOM05D007354 ORTHO05D006294 2.1e-38 163.7 249 43.8
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 3.3e-36 156.4 261 38.3
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 2.1e-35 153.7 264 39.0
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.1e-34 151.4 264 38.3
Nitab4.5_0003906g0070 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.5e-33 147.5 230 40.9
PGSC0003DMG400046284 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.1e-31 141.4 136 55.9
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 9.3e-31 138.3 251 36.7
Peaxi162Scf00123g00126 Petunia axillaris HOM05D007354 ORTHO05D006294 6.1e-30 135.6 155 49.0
Peaxi162Scf00017g00044 Petunia axillaris HOM05D007354 ORTHO05D006294 1.8e-29 134.0 151 49.7
Eucgr.L01740 Eucalyptus grandis HOM05D007354 ORTHO05D006294 5.7e-28 129.0 250 33.6
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 4.8e-27 125.9 287 36.2
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 8.2e-27 125.2 270 34.8
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 1.1e-26 124.8 230 36.1
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 1.8e-26 124.0 276 31.9
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 2.4e-26 123.6 274 36.1
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 6.9e-26 122.1 273 35.2
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 1.2e-25 121.3 274 36.1
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 2.0e-25 120.6 250 31.6
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 5.9e-25 119.0 285 31.2
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 1.0e-24 118.2 262 34.0
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.0e-24 115.9 262 31.3
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 5.0e-24 115.9 250 31.2
QL01p036431 Quercus lobata HOM05D007354 ORTHO05D006294 8.5e-24 115.2 223 37.2
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 1.1e-23 114.8 273 31.5
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.2e-23 113.2 280 28.6
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.5e-23 112.5 263 31.2
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 2.1e-22 110.5 105 54.3
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 3.6e-22 109.8 267 29.2
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 4.6e-22 109.4 210 34.8
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 7.9e-22 108.6 245 29.0
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.8e-21 107.5 253 31.6
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 8.8e-21 105.1 258 30.6
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 4.3e-20 102.8 237 29.1
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.3e-19 101.3 256 28.1
Potri.012G106750 Populus trichocarpa HOM05D007354 ORTHO05D006294 1.7e-19 100.9 270 30.4
Nitab4.5_0001173g0080 Nicotiana tabacum HOM05D007354 ORTHO05D006294 2.8e-19 100.1 168 38.7
Peaxi162Scf00255g00327 Petunia axillaris HOM05D007354 ORTHO05D006294 1.8e-18 97.4 209 34.0
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 2.4e-18 97.1 256 30.1
Rhsim08G0205200 Rhododendron simsii HOM05D007354 ORTHO05D006294 5.3e-18 95.9 257 30.7
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 6.9e-18 95.5 258 31.0
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 2.6e-17 93.6 229 33.2
PSO210G0858 Papaver somniferum HOM05D003035 ORTHO05D000440 4.5e-17 92.8 291 25.4
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 4.5e-17 92.8 314 27.7
PGSC0003DMG400046725 Solanum tuberosum HOM05D007354 ORTHO05D006294 5.9e-17 92.4 102 52.9
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.7e-16 90.9 278 28.8
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.2e-16 90.5 238 28.6
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 5.0e-16 89.4 261 28.0
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 3.2e-15 86.7 224 31.2
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.2e-14 84.7 251 29.9
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 3.6e-14 83.2 226 27.9
PGSC0003DMG400034995 Solanum tuberosum HOM05D007354 ORTHO05D006294 7.9e-14 82.0 76 57.9
SGA_v2.0_scaffold69G23065 Striga asiatica HOM05D007354 ORTHO05D006294 1.4e-13 81.3 267 27.3
Dinv36204 Davidia involucrata HOM05D003035 ORTHO05D000440 2.3e-13 80.5 234 27.8
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 6.7e-13 79.0 242 26.4
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 6.7e-13 79.0 263 28.9
Lj6g0012948 Lotus japonicus HOM05D003035 ORTHO05D006294 8.8e-13 78.6 263 27.4
PSO210G6216 Papaver somniferum HOM05D003035 ORTHO05D000440 1.1e-12 78.2 299 23.7
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 3.3e-12 76.6 96 43.8
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.4e-12 76.3 218 28.4
Peaxi162Scf00255g00043 Petunia axillaris HOM05D007354 ORTHO05D006294 4.4e-12 76.3 155 33.5
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 5.7e-12 75.9 98 46.9
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 5.7e-12 75.9 98 46.9
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 5.7e-12 75.9 78 48.7
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 1.3e-11 74.7 266 28.6
Lj6g0004158 Lotus japonicus HOM05D003035 ORTHO05D006294 2.2e-11 73.9 275 28.0
PSO675G8679 Papaver somniferum HOM05D003035 ORTHO05D000440 2.2e-11 73.9 260 26.9
QL08p010254 Quercus lobata HOM05D003035 ORTHO05D000440 3.7e-11 73.2 281 27.0
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 4.8e-11 72.8 307 24.4
QL08p010296 Quercus lobata HOM05D003035 ORTHO05D006294 4.8e-11 72.8 281 27.0
Rhsim06G0217100 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.8e-11 72.8 266 23.7
PSO675G7414 Papaver somniferum HOM05D003035 ORTHO05D000440 8.2e-11 72.0 285 24.2
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 8.2e-11 72.0 291 24.7
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 8.2e-11 72.0 278 23.4
Os09g0384900 Oryza sativa ssp. japonica HOM05D023874 ORTHO05D006294 1.1e-10 71.6 278 27.7
Aqoxy4G03031 Aquilegia oxysepala HOM05D003035 ORTHO05D000440 1.4e-10 71.2 282 22.7
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.8e-10 70.9 291 24.7
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 7.0e-10 68.9 283 21.9
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 9.1e-10 68.6 311 25.4
TAR636G1022 Trochodendron aralioides HOM05D001286 ORTHO05D000440 9.1e-10 68.6 149 33.6
HanXRQChr13g0408841 Helianthus annuus HOM05D008265 ORTHO05D000440 1.2e-09 68.2 232 23.7
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.6e-09 67.8 248 26.2
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 1.6e-09 67.8 148 32.4
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 2.0e-09 67.4 121 30.6
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.0e-09 67.4 290 22.8
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 2.6e-09 67.0 300 22.3
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.6e-09 67.0 252 23.0
PSO732G0047 Papaver somniferum HOM05D003035 ORTHO05D000440 4.5e-09 66.2 291 23.0
PSO732G0397 Papaver somniferum HOM05D003035 ORTHO05D000440 5.9e-09 65.9 285 23.5
PSO151G0151 Papaver somniferum HOM05D003035 ORTHO05D000440 1.0e-08 65.1 273 23.8
MBI19_g39771_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.3e-08 64.7 214 28.0
Nitab4.5_0011370g0020 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.3e-08 64.7 86 48.8
Migut.L00830 Erythranthe guttata HOM05D007354 ORTHO05D006294 2.2e-08 63.9 284 25.0
PSO210G0865 Papaver somniferum HOM05D003035 ORTHO05D000440 2.2e-08 63.9 275 21.8
PSO210G3833 Papaver somniferum HOM05D003035 ORTHO05D000440 2.2e-08 63.9 273 24.9
MBI19_g41824_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.9e-08 63.5 197 29.4
Cfa007811 Carpinus fangiana HOM05D001286 ORTHO05D000440 3.8e-08 63.2 276 24.3
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 3.8e-08 63.2 284 27.5
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 5.0e-08 62.8 276 24.3
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 6.5e-08 62.4 67 43.3
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 6.5e-08 62.4 315 22.5
PSO832G0982 Papaver somniferum HOM05D003035 ORTHO05D000440 1.5e-07 61.2 307 23.8
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 1.5e-07 61.2 261 27.2
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.9e-07 60.8 268 25.7
HanXRQChr01g0025361 Helianthus annuus HOM05D008265 ORTHO05D000440 1.9e-07 60.8 267 22.5
Ciclev10010650m.g Citrus clementina HOM05D003171 ORTHO05D000921 2.5e-07 60.5 254 26.8
PSO339G4508 Papaver somniferum HOM05D003035 ORTHO05D000440 2.5e-07 60.5 293 23.2
Migut.F01441 Erythranthe guttata HOM05D011758 ORTHO05D006294 4.2e-07 59.7 70 45.7
MBI19_g31306_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 4.2e-07 59.7 253 24.1
EL10Ac4g07794 Beta vulgaris HOM05D003035 ORTHO05D000440 5.5e-07 59.3 290 24.1
PSO210G0201 Papaver somniferum HOM05D003035 ORTHO05D000440 5.5e-07 59.3 309 22.7
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 7.2e-07 58.9 263 27.0
COL.COLO4_30702 Corchorus olitorius HOM05D003035 ORTHO05D000440 7.2e-07 58.9 232 28.0
PSO339G4296 Papaver somniferum HOM05D003035 ORTHO05D000440 7.2e-07 58.9 252 24.2
COL.COLO4_22246 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.6e-06 57.8 92 37.0
Rhsim01G0045700 Rhododendron simsii HOM05D007354 ORTHO05D006294 2.1e-06 57.4 108 34.3
Migut.J00230 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.7e-06 57.0 92 30.4
HanXRQChr01g0025341 Helianthus annuus HOM05D008265 ORTHO05D000440 2.7e-06 57.0 287 21.6
EL10Ac4g07793 Beta vulgaris HOM05D003035 ORTHO05D000440 3.6e-06 56.6 287 24.0
Lj6g0023511 Lotus japonicus HOM05D003035 ORTHO05D006294 3.6e-06 56.6 285 21.8
TAR376G0134 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.6e-06 56.6 230 22.6
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 4.7e-06 56.2 283 25.1
ECA247G0747 Erigeron canadensis HOM05D008265 ORTHO05D000440 4.7e-06 56.2 226 22.1
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 6.1e-06 55.8 108 32.4
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 6.1e-06 55.8 260 23.8
FAN14G1586 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.0e-06 55.5 234 24.8
SGA_v2.0_scaffold24G10327 Striga asiatica HOM05D011758 ORTHO05D006294 8.0e-06 55.5 66 40.9


User provided reference genes

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