Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003537g0060 Nicotiana tabacum HOM05D003277 ORTHO05D003275 2.4e-122 442.2 221 100.0
Peaxi162Scf00546g00117 Petunia axillaris HOM05D003277 ORTHO05D003275 7.4e-76 287.7 225 71.1
Solyc12g007040.3 Solanum lycopersicum HOM05D003277 ORTHO05D003275 9.4e-71 270.8 224 69.6
Nitab4.5_0011350g0010 Nicotiana tabacum HOM05D003277 ORTHO05D003275 1.8e-42 176.8 111 82.9
PGSC0003DMG400000320 Solanum tuberosum HOM05D003277 ORTHO05D003275 3.1e-42 176.0 108 81.5
Sopen12g003020 Solanum pennellii HOM05D003277 ORTHO05D003275 2.6e-36 156.4 111 73.9
PGSC0003DMG400000318 Solanum tuberosum HOM05D003277 ORTHO05D003275 2.0e-33 146.7 111 73.0
Sopen12g003030 Solanum pennellii HOM05D003277 ORTHO05D003275 2.3e-32 143.3 112 69.6
Sopen12g003040 Solanum pennellii HOM05D003277 ORTHO05D003275 2.3e-32 143.3 114 67.5
PGSC0003DMG400000319 Solanum tuberosum HOM05D003277 ORTHO05D003275 2.0e-28 130.2 117 61.5
Peaxi162Scf00560g00019 Petunia axillaris HOM05D003277 ORTHO05D003275 7.0e-26 121.7 139 51.1
Nitab4.5_0011350g0020 Nicotiana tabacum HOM05D003277 ORTHO05D003275 2.3e-24 116.7 61 91.8
Dinv36618 Davidia involucrata HOM05D003277 ORTHO05D003275 8.3e-19 98.2 115 51.3
RhsimUnG0085500 Rhododendron simsii HOM05D003277 ORTHO05D003275 5.1e-16 89.0 100 49.0
Duzib150G0682 Durio zibethinus HOM05D003277 ORTHO05D003275 2.5e-15 86.7 115 46.1
COL.COLO4_34902 Corchorus olitorius HOM05D003277 ORTHO05D003275 3.3e-15 86.3 120 44.2
FAN26G0013 Fragaria x ananassa HOM05D003277 ORTHO05D003275 2.8e-14 83.2 119 43.7
FvH4_1g05060 Fragaria vesca HOM05D003277 ORTHO05D003275 6.2e-14 82.0 119 43.7
FAN19G2424 Fragaria x ananassa HOM05D000750 ORTHO05D000714 6.2e-14 82.0 119 43.7
Glyma.05G231600 Glycine max HOM05D003277 ORTHO05D003275 6.2e-14 82.0 98 50.0
Prupe.7G229300 Prunus persica HOM05D003277 ORTHO05D003275 6.2e-14 82.0 123 47.2
Gohir.A07G006900 Gossypium hirsutum HOM05D003277 ORTHO05D003275 1.1e-13 81.3 121 43.0
Gorai.001G004600 Gossypium raimondii HOM05D003277 ORTHO05D003275 1.1e-13 81.3 119 42.9
Thecc.09G112200 Theobroma cacao HOM05D003277 ORTHO05D003275 1.1e-13 81.3 116 44.8
FAN23G0772 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.8e-13 80.5 119 42.9
FAN28G0377 Fragaria x ananassa HOM05D000750 ORTHO05D000714 1.8e-13 80.5 116 44.0
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 2.3e-13 80.1 74 56.8
Hma1.2p1_0018F.1_g013430 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 3.1e-13 79.7 103 45.6
arahy.Tifrunner.gnm1.ann1.R7R2S9 Arachis hypogaea HOM05D003277 ORTHO05D003275 1.2e-12 77.8 105 51.4
Nn2g11767 Nelumbo nucifera HOM05D003277 ORTHO05D003275 4.4e-12 75.9 100 44.0
TAR624G0051 Trochodendron aralioides HOM05D003277 ORTHO05D003275 5.8e-12 75.5 99 48.5
Nn8g39213 Nelumbo nucifera HOM05D003277 ORTHO05D003275 7.6e-12 75.1 102 46.1
Haze_25704 Corylus avellana HOM05D000750 ORTHO05D000714 1.7e-11 73.9 106 46.2
Lsat_1_v5_gn_8_93781 Lactuca sativa HOM05D000750 ORTHO05D000714 3.8e-11 72.8 112 43.8
Glyma.07G087300 Glycine max HOM05D003277 ORTHO05D003275 4.9e-11 72.4 67 59.7
CANSAT56G3518 Cannabis sativa HOM05D003277 ORTHO05D003275 8.4e-11 71.6 125 36.8
Gohir.D07G005000 Gossypium hirsutum HOM05D003277 ORTHO05D003275 1.4e-10 70.9 99 44.4
Manes.16G117100 Manihot esculenta HOM05D003277 ORTHO05D003275 1.4e-10 70.9 105 41.0
Aqoxy7G01700 Aquilegia oxysepala HOM05D003277 ORTHO05D003275 1.9e-10 70.5 103 41.7
DCAR_021143 Daucus carota HOM05D003277 ORTHO05D003275 1.9e-10 70.5 116 40.5
QL02p085574 Quercus lobata HOM05D003277 ORTHO05D003275 2.4e-10 70.1 100 43.0
VMungo0251G2336 Vigna mungo HOM05D003277 ORTHO05D003275 5.4e-10 68.9 100 43.0
Cfa003268 Carpinus fangiana HOM05D003277 ORTHO05D003275 7.1e-10 68.6 103 44.7
Medtr8g083490 Medicago truncatula HOM05D003277 ORTHO05D003275 7.1e-10 68.6 69 53.6
MBI01_g34157_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 1.6e-09 67.4 102 42.2
Phvul.002G313800 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 1.6e-09 67.4 67 55.2
COL.COLO4_26960 Corchorus olitorius HOM05D003277 ORTHO05D003275 2.1e-09 67.0 104 42.3
Glyma.04G079300 Glycine max HOM05D003277 ORTHO05D003275 2.1e-09 67.0 105 41.9
QL05p023505 Quercus lobata HOM05D003277 ORTHO05D003275 2.1e-09 67.0 75 48.0
TPR.G27852 Trifolium pratense HOM05D003277 ORTHO05D003275 2.7e-09 66.6 105 40.0
Phvul.004G162400 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 3.5e-09 66.2 102 46.1
Medtr3g109430 Medicago truncatula HOM05D003277 ORTHO05D003275 6.0e-09 65.5 97 39.2
Duzib235G0396 Durio zibethinus HOM05D003277 ORTHO05D003275 7.8e-09 65.1 73 52.1
Glyma.06G080800 Glycine max HOM05D003277 ORTHO05D003275 7.8e-09 65.1 105 39.0
MBI04_g08935_MAGBIO Magnolia biondii HOM05D003277 ORTHO05D003275 7.8e-09 65.1 99 39.4
Psat0s1478g0280 Pisum sativum HOM05D003277 ORTHO05D003275 1.0e-08 64.7 106 36.8
Atru.chr7.2298 Acer truncatum HOM05D003277 ORTHO05D003275 1.7e-08 63.9 103 36.9
AUR62011006 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.7e-08 63.9 99 42.4
Ciclev10010574m.g Citrus clementina HOM05D003277 ORTHO05D003275 2.3e-08 63.5 106 43.4
Cc04_g03410 Coffea canephora HOM05D003277 ORTHO05D003275 2.3e-08 63.5 76 46.1
Cc02_g27850 Coffea canephora HOM05D003277 ORTHO05D003275 3.0e-08 63.2 93 40.9
DCAR_010449 Daucus carota HOM05D003277 ORTHO05D003275 3.0e-08 63.2 69 53.6
Glyma.09G189600 Glycine max HOM05D003277 ORTHO05D003275 3.0e-08 63.2 67 53.7
SGA_v2.0_scaffold27G11531 Striga asiatica HOM05D003277 ORTHO05D003275 3.0e-08 63.2 104 36.5
Thecc.06G088500 Theobroma cacao HOM05D003277 ORTHO05D003275 3.0e-08 63.2 73 50.7
Ca_15626_v3 Cicer arietinum L. HOM05D003277 ORTHO05D003275 3.9e-08 62.8 104 38.5
COL.COLO4_30383 Corchorus olitorius HOM05D003277 ORTHO05D003275 5.1e-08 62.4 68 51.5
ATR1120G187 Amborella trichopoda HOM05D003277 ORTHO05D003275 6.6e-08 62.0 73 54.8
Oeu033486.1 Olea europaea HOM05D003277 ORTHO05D003275 6.6e-08 62.0 97 40.2
Oeu036629.1 Olea europaea HOM05D003277 ORTHO05D003275 6.6e-08 62.0 105 38.1
ATR1120G160 Amborella trichopoda HOM05D003277 ORTHO05D003275 8.6e-08 61.6 103 41.7
Prupe.1G454200 Prunus persica HOM05D003277 ORTHO05D003275 8.6e-08 61.6 102 39.2
SGA_v2.0_scaffold5G02589 Striga asiatica HOM05D003277 ORTHO05D003275 8.6e-08 61.6 103 43.7
EL10Ac2g02521 Beta vulgaris HOM05D003277 ORTHO05D003275 1.1e-07 61.2 80 42.5
Ciclev10026796m.g Citrus clementina HOM05D003277 ORTHO05D003275 1.5e-07 60.8 74 45.9
Sed0006476 Sechium edule HOM05D003277 ORTHO05D003275 1.5e-07 60.8 107 39.3
vmacro18909 Vaccinium macrocarpon HOM05D003277 ORTHO05D003275 1.9e-07 60.5 73 47.9
ATR1120G144 Amborella trichopoda HOM05D003277 ORTHO05D003275 2.5e-07 60.1 80 47.5
Atru.chr1.3275 Acer truncatum HOM05D003277 ORTHO05D003275 3.3e-07 59.7 74 44.6
Hma1.2p1_0092F.1_g046645 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 3.3e-07 59.7 103 41.7
ATR1120G013 Amborella trichopoda HOM05D003277 ORTHO05D003275 4.3e-07 59.3 80 47.5
CSS0031837 Camellia sinensis var. sinensis HOM05D003277 ORTHO05D003275 5.6e-07 58.9 74 45.9
TPR.G12111 Trifolium pratense HOM05D003277 ORTHO05D003275 5.6e-07 58.9 105 35.2
Ciclev10009982m.g Citrus clementina HOM05D003277 ORTHO05D003275 7.3e-07 58.5 73 42.5
Prupe.3G070700 Prunus persica HOM05D003277 ORTHO05D003275 7.3e-07 58.5 69 47.8
Manes.03G064500 Manihot esculenta HOM05D003277 ORTHO05D003275 9.6e-07 58.2 106 37.7
Manes.03G064940 Manihot esculenta HOM05D003277 ORTHO05D003275 9.6e-07 58.2 106 37.7
Manes.04G123700 Manihot esculenta HOM05D003277 ORTHO05D003275 9.6e-07 58.2 84 38.1
Atru.chr7.1333 Acer truncatum HOM05D003277 ORTHO05D003275 1.2e-06 57.8 65 49.2
ATR1120G137 Amborella trichopoda HOM05D003277 ORTHO05D003275 1.2e-06 57.8 78 46.2
Oeu063975.1 Olea europaea HOM05D003277 ORTHO05D003275 1.2e-06 57.8 73 46.6
Oeu063976.1 Olea europaea HOM05D003277 ORTHO05D003275 1.2e-06 57.8 73 46.6
Glyma.14G140500 Glycine max HOM05D003277 ORTHO05D003275 1.6e-06 57.4 105 37.1
RcHm_v2.0_Chr2g0137921 Rosa chinensis HOM05D003277 ORTHO05D003275 1.6e-06 57.4 67 46.3
MELO3C003594.2 Cucumis melo HOM05D003277 ORTHO05D003275 2.1e-06 57.0 106 38.7
Migut.A00248 Erythranthe guttata HOM05D003277 ORTHO05D003275 2.1e-06 57.0 102 35.3
Gohir.D05G129700 Gossypium hirsutum HOM05D003277 ORTHO05D003275 2.1e-06 57.0 73 45.2
Gorai.009G133500 Gossypium raimondii HOM05D003277 ORTHO05D003275 2.1e-06 57.0 73 45.2
Lj1g0024029 Lotus japonicus HOM05D003277 ORTHO05D003275 2.1e-06 57.0 104 37.5
Potri.001G180500 Populus trichocarpa HOM05D003277 ORTHO05D003275 2.1e-06 57.0 76 42.1
Sabra01G0146300 Salix brachista HOM05D003277 ORTHO05D003275 2.8e-06 56.6 80 41.2
CANSAT56G1808 Cannabis sativa HOM05D003277 ORTHO05D003275 3.6e-06 56.2 107 37.4
Gohir.A05G049100 Gossypium hirsutum HOM05D003277 ORTHO05D003275 3.6e-06 56.2 105 39.0
Gohir.D05G051000 Gossypium hirsutum HOM05D003277 ORTHO05D003275 3.6e-06 56.2 105 39.0
Gorai.009G052600 Gossypium raimondii HOM05D003277 ORTHO05D003275 3.6e-06 56.2 105 39.0
MD17G1194700 Malus domestica HOM05D003277 ORTHO05D003275 3.6e-06 56.2 68 51.5
Manes.16G066800 Manihot esculenta HOM05D003277 ORTHO05D003275 3.6e-06 56.2 121 36.4
Haze_21824 Corylus avellana HOM05D003277 ORTHO05D003275 4.7e-06 55.8 70 44.3
CsaV3_3G047340 Cucumis sativus L. HOM05D002580 ORTHO05D002811 4.7e-06 55.8 106 37.7
Phvul.009G105000 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 4.7e-06 55.8 105 39.0
vmacro18910 Vaccinium macrocarpon HOM05D003277 ORTHO05D003275 4.7e-06 55.8 75 41.3
Actinidia32754 Actinidia chinensis HOM05D003277 ORTHO05D003275 6.2e-06 55.5 75 45.3
Gohir.A05G130300 Gossypium hirsutum HOM05D003277 ORTHO05D003275 6.2e-06 55.5 73 43.8
Manes.11G047000 Manihot esculenta HOM05D003277 ORTHO05D003275 6.2e-06 55.5 80 38.8
Cpa.g.sc205.7 Carica papaya HOM05D003277 ORTHO05D003275 8.1e-06 55.1 68 44.1
Glyma.15G014600 Glycine max HOM05D003277 ORTHO05D003275 8.1e-06 55.1 72 44.4
Phvul.005G171100 Phaseolus vulgaris HOM05D003277 ORTHO05D003275 8.1e-06 55.1 68 45.6
RcHm_v2.0_Chr6g0305601 Rosa chinensis HOM05D003277 ORTHO05D003275 8.1e-06 55.1 69 46.4


User provided reference genes

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