Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003501g0040 Nicotiana tabacum HOM05D004397 ORTHO05D005271 3.1e-40 167.9 80 100.0
Nitab4.5_0000678g0090 Nicotiana tabacum HOM05D004397 ORTHO05D005271 5.9e-31 137.1 80 80.0
Nitab4.5_0006802g0080 Nicotiana tabacum HOM05D004397 ORTHO05D005271 3.8e-30 134.4 80 81.2
Nitab4.5_0014148g0010 Nicotiana tabacum HOM05D004397 ORTHO05D005271 1.1e-29 132.9 80 81.2
Nitab4.5_0003603g0020 Nicotiana tabacum HOM05D004397 ORTHO05D005271 7.2e-29 130.2 80 80.0
Nitab4.5_0006174g0030 Nicotiana tabacum HOM05D004397 ORTHO05D005271 1.5e-26 122.5 69 85.5
Nitab4.5_0003508g0010 Nicotiana tabacum HOM05D004397 ORTHO05D005271 2.2e-25 118.6 81 74.1
Peaxi162Scf01073g00117 Petunia axillaris HOM05D004397 ORTHO05D005271 1.1e-24 116.3 81 72.8
Cpa.g.sc152.55 Carica papaya HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
CiPaw.09G097700 Carya illinoinensis HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
GSVIVG01004810001 Vitis vinifera HOM05D004397 ORTHO05D005271 3.1e-24 114.8 81 71.6
CiPaw.10G074300 Carya illinoinensis HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 70.4
Nitab4.5_0002335g0060 Nicotiana tabacum HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 72.8
Solyc12g088730.2 Solanum lycopersicum HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 71.6
Sopen12g030630 Solanum pennellii HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 71.6
PGSC0003DMG400015407 Solanum tuberosum HOM05D004397 ORTHO05D005271 4.1e-24 114.4 81 71.6
Nn1g07269 Nelumbo nucifera HOM05D004397 ORTHO05D005271 9.1e-24 113.2 81 69.1
QL03p004896 Quercus lobata HOM05D004397 ORTHO05D005271 9.1e-24 113.2 81 69.1
QL05p071977 Quercus lobata HOM05D004397 ORTHO05D005271 9.1e-24 113.2 81 69.1
SGA_v2.0_scaffold543G52819 Striga asiatica HOM05D004397 ORTHO05D005271 9.1e-24 113.2 81 71.6
Cfa000163 Carpinus fangiana HOM05D004397 ORTHO05D005271 1.2e-23 112.8 81 71.6
Haze_06856 Corylus avellana HOM05D004397 ORTHO05D005271 1.2e-23 112.8 81 71.6
HanXRQChr01g0014371 Helianthus annuus HOM05D004397 ORTHO05D005271 1.2e-23 112.8 81 71.6
Thecc.06G227900 Theobroma cacao HOM05D004397 ORTHO05D005271 1.2e-23 112.8 81 71.6
Hma1.2p1_0226F.1_g095780 Hydrangea macrophylla HOM05D004397 ORTHO05D005271 1.5e-23 112.5 81 70.4
Dinv12378 Davidia involucrata HOM05D004397 ORTHO05D005271 2.0e-23 112.1 81 70.4
MSTRG.1068 Avicennia marina HOM05D004397 ORTHO05D005271 2.6e-23 111.7 81 70.4
arahy.Tifrunner.gnm1.ann1.K9NX2S Arachis hypogaea HOM05D004397 ORTHO05D005271 3.4e-23 111.3 81 69.1
Duzib192G0217 Durio zibethinus HOM05D004397 ORTHO05D005271 3.4e-23 111.3 81 70.4
Sed0027185 Sechium edule HOM05D004397 ORTHO05D005271 4.5e-23 110.9 81 70.4
TAR626G0623 Trochodendron aralioides HOM05D004397 ORTHO05D005271 4.5e-23 110.9 81 69.1
COL.COLO4_31830 Corchorus olitorius HOM05D004397 ORTHO05D005271 5.9e-23 110.5 81 69.1
CSS0021903 Camellia sinensis var. sinensis HOM05D004397 ORTHO05D005271 1.0e-22 109.8 81 69.1
CSS0044102 Camellia sinensis var. sinensis HOM05D004397 ORTHO05D005271 1.0e-22 109.8 81 69.1
Sed0005973 Sechium edule HOM05D004397 ORTHO05D005271 1.0e-22 109.8 81 69.1
Potri.004G004800 Populus trichocarpa HOM05D004397 ORTHO05D005271 1.3e-22 109.4 81 70.4
TPR.G34683 Trifolium pratense HOM05D004397 ORTHO05D005271 1.3e-22 109.4 81 67.9
TAR629G1518 Trochodendron aralioides HOM05D004397 ORTHO05D005271 1.3e-22 109.4 81 67.9
unitig_37.g12949 Utricularia gibba HOM05D004397 ORTHO05D005271 1.3e-22 109.4 81 69.1
MSTRG.25075 Avicennia marina HOM05D004397 ORTHO05D005271 1.7e-22 109.0 81 69.1
Cc10_g04670 Coffea canephora HOM05D004397 ORTHO05D005271 1.7e-22 109.0 81 69.1
Lj4A769T44 Lonicera japonica HOM05D004397 ORTHO05D005271 1.7e-22 109.0 81 67.9
Medtr3g107920 Medicago truncatula HOM05D004397 ORTHO05D005271 1.7e-22 109.0 81 66.7
Oeu023826.3 Olea europaea HOM05D004397 ORTHO05D005271 1.7e-22 109.0 81 67.9
PGR004G1068 Punica granatum HOM05D004397 ORTHO05D005271 1.7e-22 109.0 81 69.1
THA.LOC104809478 Tarenaya hassleriana HOM05D004397 ORTHO05D005271 1.7e-22 109.0 81 69.1
CsaV3_6G048740 Cucumis sativus L. HOM05D004397 ORTHO05D005271 2.2e-22 108.6 81 67.9
FvH4_3g01410 Fragaria vesca HOM05D004397 ORTHO05D005271 2.2e-22 108.6 81 67.9
FAN21G0257 Fragaria x ananassa HOM05D004397 ORTHO05D005271 2.2e-22 108.6 81 67.9
FAN25G3034 Fragaria x ananassa HOM05D004397 ORTHO05D005271 2.2e-22 108.6 81 67.9
Sabra04G0002500 Salix brachista HOM05D004397 ORTHO05D005271 2.2e-22 108.6 81 70.4
Aa31LG8G17020 Aethionema arabicum HOM05D004397 ORTHO05D005271 2.9e-22 108.2 81 69.1
BcaB08g34896 Brassica carinata HOM05D004397 ORTHO05D005271 2.9e-22 108.2 81 69.1
BcaC07g41228 Brassica carinata HOM05D004397 ORTHO05D005271 2.9e-22 108.2 81 69.1
A09p59050 Brassica napus HOM05D004397 ORTHO05D005271 2.9e-22 108.2 81 69.1
C08p42330 Brassica napus HOM05D004397 ORTHO05D005271 2.9e-22 108.2 81 69.1
BolC8t51793H Brassica oleracea HOM05D004397 ORTHO05D005271 2.9e-22 108.2 81 69.1
BraA09t41289Z Brassica rapa HOM05D004397 ORTHO05D005271 2.9e-22 108.2 81 69.1
BcaC06g36686 Brassica carinata HOM05D004397 ORTHO05D005271 3.8e-22 107.8 81 67.9
A07p00590 Brassica napus HOM05D004397 ORTHO05D005271 3.8e-22 107.8 81 67.9
C07p01050 Brassica napus HOM05D004397 ORTHO05D005271 3.8e-22 107.8 81 67.9
BolC7t40544H Brassica oleracea HOM05D004397 ORTHO05D005271 3.8e-22 107.8 81 67.9
BraA07t27855Z Brassica rapa HOM05D004397 ORTHO05D005271 3.8e-22 107.8 81 67.9
ClCG01G021700 Citrullus lanatus HOM05D004397 ORTHO05D005271 3.8e-22 107.8 81 67.9
MD05G1352400 Malus domestica HOM05D004397 ORTHO05D005271 3.8e-22 107.8 81 69.1
MD10G1326400 Malus domestica HOM05D004397 ORTHO05D005271 3.8e-22 107.8 81 69.1
Ca_00691_v3 Cicer arietinum L. HOM05D004397 ORTHO05D005271 5.0e-22 107.5 79 68.4
Prupe.2G035900 Prunus persica HOM05D004397 ORTHO05D005271 5.0e-22 107.5 81 67.9
Sp3g33370 Schrenkiella parvula HOM05D004397 ORTHO05D005271 5.0e-22 107.5 81 67.9
Lalb_Chr20g0118941 Lupinus albus HOM05D004397 ORTHO05D005271 6.5e-22 107.1 81 66.7
Manes.16G003100 Manihot esculenta HOM05D004397 ORTHO05D005271 6.5e-22 107.1 81 67.9
RcHm_v2.0_Chr5g0002131 Rosa chinensis HOM05D004397 ORTHO05D005271 6.5e-22 107.1 81 66.7
Aqoxy1G03506 Aquilegia oxysepala HOM05D004397 ORTHO05D005271 8.5e-22 106.7 81 65.4
MBI05_g10534_MAGBIO Magnolia biondii HOM05D004397 ORTHO05D005271 8.5e-22 106.7 81 67.9
CDE03G0208 Ceratophyllum demersum HOM05D004397 ORTHO05D005271 1.1e-21 106.3 81 66.7
CDE06G0724 Ceratophyllum demersum HOM05D004397 ORTHO05D005271 1.1e-21 106.3 81 66.7
Migut.N02747 Erythranthe guttata HOM05D004397 ORTHO05D005271 1.1e-21 106.3 81 67.9
Glyma.09G007300 Glycine max HOM05D004397 ORTHO05D005271 1.1e-21 106.3 81 65.4
Gohir.A05G173000 Gossypium hirsutum HOM05D004397 ORTHO05D005271 1.1e-21 106.3 81 66.7
Gohir.D05G176000 Gossypium hirsutum HOM05D004397 ORTHO05D005271 1.1e-21 106.3 81 66.7
Gorai.009G181400 Gossypium raimondii HOM05D004397 ORTHO05D005271 1.1e-21 106.3 81 66.7
Atru.chr10.2278 Acer truncatum HOM05D004397 ORTHO05D005271 1.4e-21 105.9 81 69.1
AT2G20060 Arabidopsis thaliana HOM05D004397 ORTHO05D005271 1.4e-21 105.9 81 66.7
Migut.L00082 Erythranthe guttata HOM05D004397 ORTHO05D005271 1.4e-21 105.9 81 67.9
Phvul.010G046600 Phaseolus vulgaris HOM05D004397 ORTHO05D005271 1.4e-21 105.9 81 65.4
ECA236G1813 Erigeron canadensis HOM05D004397 ORTHO05D005271 1.9e-21 105.5 81 66.7
Phvul.006G146000 Phaseolus vulgaris HOM05D004397 ORTHO05D005271 1.9e-21 105.5 81 65.4
Carub.0003s3434 Capsella rubella HOM05D004397 ORTHO05D005271 2.5e-21 105.1 81 66.7
Thhalv10002043m.g Eutrema salsugineum HOM05D004397 ORTHO05D005271 2.5e-21 105.1 77 70.1
Os11g0585700 Oryza sativa ssp. japonica HOM05D004397 ORTHO05D005271 2.5e-21 105.1 81 66.7
Zm00001eb061360 Zea mays HOM05D004397 ORTHO05D005271 2.5e-21 105.1 81 66.7
Glyma.15G111700 Glycine max HOM05D004397 ORTHO05D005271 3.2e-21 104.8 81 64.2
PSO063G2973 Papaver somniferum HOM05D004397 ORTHO05D005271 3.2e-21 104.8 77 68.8
PSO782G1961 Papaver somniferum HOM05D004397 ORTHO05D005271 3.2e-21 104.8 77 68.8
Psat5g077520 Pisum sativum HOM05D004397 ORTHO05D005271 3.2e-21 104.8 81 64.2
VMungo0540G2306 Vigna mungo HOM05D004397 ORTHO05D005271 3.2e-21 104.8 81 64.2
DCAR_019438 Daucus carota HOM05D004397 ORTHO05D005271 4.2e-21 104.4 81 66.7
Lsat_1_v5_gn_4_51441 Lactuca sativa HOM05D004397 ORTHO05D005271 4.2e-21 104.4 81 66.7
MBI05_g23392_MAGBIO Magnolia biondii HOM05D004397 ORTHO05D005271 4.2e-21 104.4 81 66.7
Sc16g0006660 Simmondsia chinensis HOM05D004397 ORTHO05D005271 4.2e-21 104.4 81 66.7
THA.LOC104823539 Tarenaya hassleriana HOM05D004397 ORTHO05D005271 4.2e-21 104.4 81 66.7
AL3G48030 Arabidopsis lyrata HOM05D004397 ORTHO05D005271 5.5e-21 104.0 81 65.4
Gohir.A06G150933 Gossypium hirsutum HOM05D004397 ORTHO05D005271 5.5e-21 104.0 73 69.9
CARHR110570 Cardamine hirsuta HOM05D004397 ORTHO05D005271 7.2e-21 103.6 81 65.4
Nitab4.5_0003290g0070 Nicotiana tabacum HOM05D004397 ORTHO05D005271 7.2e-21 103.6 80 66.2
SalBow7G1927 Salvia bowleyana HOM05D004397 ORTHO05D005271 7.2e-21 103.6 81 66.7
ATR0307G084 Amborella trichopoda HOM05D004397 ORTHO05D005271 9.4e-21 103.2 81 64.2
DCAR_002834 Daucus carota HOM05D004397 ORTHO05D005271 9.4e-21 103.2 81 65.4
Hund00398 Selenicereus undatus HOM05D004397 ORTHO05D005271 1.2e-20 102.8 81 65.4
vmacro09207 Vaccinium macrocarpon HOM05D004397 ORTHO05D005271 1.6e-20 102.4 84 60.7
Rhsim04G0075400 Rhododendron simsii HOM05D004397 ORTHO05D005271 6.1e-20 100.5 81 61.7
TWI38G0690 Tripterygium wilfordii HOM05D004397 ORTHO05D005271 6.1e-20 100.5 81 65.4
TWI63G0777 Tripterygium wilfordii HOM05D004397 ORTHO05D005271 6.1e-20 100.5 81 65.4
Eucgr.G00454 Eucalyptus grandis HOM05D004397 ORTHO05D005271 1.0e-19 99.8 81 63.0
Peaxi162Scf01027g00012 Petunia axillaris HOM05D004397 ORTHO05D005271 1.8e-19 99.0 87 58.6
AUR62008935 Chenopodium quinoa HOM05D004397 ORTHO05D005271 3.9e-19 97.8 77 66.2
EL10Ac7g17869 Beta vulgaris HOM05D004397 ORTHO05D005271 1.5e-18 95.9 76 64.5
HPP92_018530 Vanilla planifolia HOM05D004397 ORTHO05D005271 1.5e-18 95.9 81 60.5
BcaB03g16800 Brassica carinata HOM05D004397 ORTHO05D005271 3.3e-18 94.7 72 66.7
Lj6g0022899 Lotus japonicus HOM05D004397 ORTHO05D005271 7.4e-18 93.6 76 61.8
Nitab4.5_0004376g0020 Nicotiana tabacum HOM05D004397 ORTHO05D005271 7.4e-18 93.6 66 74.2
Ah.08g214470 Amaranthus hybridus HOM05D004397 ORTHO05D005271 2.2e-17 92.0 76 60.5
Nitab4.5_0002335g0080 Nicotiana tabacum HOM05D004397 ORTHO05D005271 3.7e-17 91.3 83 63.9
SGA_v2.0_scaffold404G51008 Striga asiatica HOM05D004397 ORTHO05D005271 3.7e-17 91.3 51 84.3
CAN.G1194.11 Capsicum annuum HOM05D004397 ORTHO05D005271 1.1e-16 89.7 66 71.2
SHI04147 Sapria himalayana HOM05D004397 ORTHO05D005271 1.4e-16 89.4 81 56.8
Mapoly0162s0019 Marchantia polymorpha HOM05D004397 ORTHO05D005271 5.3e-16 87.4 79 59.5
Oeu012435.1 Olea europaea HOM05D004397 ORTHO05D005271 1.2e-15 86.3 66 68.2
Actinidia22115 Actinidia chinensis HOM05D004397 ORTHO05D005271 5.9e-15 84.0 66 66.7
AUR62001111 Chenopodium quinoa HOM05D004397 ORTHO05D005271 2.9e-14 81.6 67 62.7
Pp3c13_15330 Physcomitrium patens HOM05D004397 ORTHO05D005271 5.0e-14 80.9 79 54.4
AagrBONN_evm.TU.Sc2ySwM_228.2975 Anthoceros agrestis HOM05D004397 ORTHO05D005271 6.5e-14 80.5 79 55.7
BcaB06g28897 Brassica carinata HOM05D004397 ORTHO05D005271 1.1e-13 79.7 66 63.6
CBR_g40797 Chara braunii HOM05D004397 ORTHO05D005271 3.2e-13 78.2 80 51.2
SMO116G0021 Selaginella moellendorffii HOM05D004397 ORTHO05D005271 1.0e-11 73.2 76 48.7
Actinidia30586 Actinidia chinensis HOM05D004397 ORTHO05D005271 1.8e-08 62.4 41 70.7
MELO3C007416.2 Cucumis melo HOM05D004397 ORTHO05D005271 1.8e-08 62.4 64 53.1
Gorai.010G183700 Gossypium raimondii HOM05D004397 ORTHO05D005271 9.1e-08 60.1 52 61.5
Lsat_1_v5_gn_7_66500 Lactuca sativa HOM05D004397 ORTHO05D005271 7.7e-07 57.0 35 71.4
Cre12.g520400 Chlamydomonas reinhardtii HOM05D004397 ORTHO05D005271 1.0e-06 56.6 64 43.8
Migut.O00819 Erythranthe guttata HOM05D004397 ORTHO05D005271 1.0e-06 56.6 51 58.8
Prupe.4G015300 Prunus persica HOM05D004397 ORTHO05D005271 1.0e-06 56.6 37 70.3
Gohir.D06G157201 Gossypium hirsutum HOM05D004397 ORTHO05D005271 1.3e-06 56.2 36 72.2


User provided reference genes

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