Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 9.1e-221 770.0 407 100.0
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 4.4e-191 671.4 380 94.5
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 3.8e-187 658.3 407 85.5
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 8.6e-187 657.1 408 86.0
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 2.3e-184 649.0 408 85.3
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 2.9e-182 642.1 408 84.3
CAN.G78.137 Capsicum annuum HOM05D005133 ORTHO05D006685 6.2e-169 597.8 407 79.1
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 2.1e-140 503.1 413 69.7
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 1.2e-135 487.3 408 66.4
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 1.2e-135 487.3 408 66.4
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 1.1e-133 480.7 404 68.8
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 5.5e-133 478.4 407 66.6
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 7.1e-133 478.0 404 66.3
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 1.2e-132 477.2 408 67.6
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 3.5e-132 475.7 404 66.1
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 6.0e-132 474.9 412 66.5
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 2.3e-131 473.0 408 65.7
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 6.7e-131 471.5 408 65.2
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.9e-130 469.9 404 65.3
SalBow3G2243 Salvia bowleyana HOM05D005133 ORTHO05D006685 3.3e-130 469.2 438 62.8
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 5.6e-130 468.4 398 66.6
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 2.1e-129 466.5 404 64.6
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 2.1e-129 466.5 409 66.0
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 2.1e-129 466.5 412 64.3
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 4.8e-129 465.3 414 65.2
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 2.4e-128 463.0 395 66.3
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 4.0e-128 462.2 408 64.2
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 1.5e-127 460.3 402 64.9
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 2.0e-127 459.9 416 64.7
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 3.4e-127 459.1 410 63.4
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 3.4e-127 459.1 391 66.5
DCAR_025229 Daucus carota HOM05D005133 ORTHO05D006685 7.6e-127 458.0 400 63.2
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 6.5e-126 454.9 397 65.0
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 1.4e-125 453.8 420 62.1
arahy.Tifrunner.gnm1.ann1.YZ0HQS Arachis hypogaea HOM05D005133 ORTHO05D006685 2.5e-125 453.0 407 62.4
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 5.5e-125 451.8 407 62.7
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 1.2e-124 450.7 407 64.9
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.6e-124 450.3 408 63.0
HanXRQChr17g0562291 Helianthus annuus HOM05D005133 ORTHO05D006685 6.0e-124 448.4 405 62.5
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.0e-123 447.6 395 64.6
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 1.0e-123 447.6 404 63.4
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 1.3e-123 447.2 382 64.4
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 3.0e-123 446.0 407 61.7
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 3.0e-123 446.0 402 63.4
Prupe.2G179100 Prunus persica HOM05D005133 ORTHO05D006685 3.9e-123 445.7 407 62.2
MD07G1130200 Malus domestica HOM05D005133 ORTHO05D006685 3.3e-122 442.6 388 62.6
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 3.3e-122 442.6 403 63.0
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 3.3e-122 442.6 386 63.2
PGR031G0061 Punica granatum HOM05D005133 ORTHO05D006685 1.3e-121 440.7 415 62.4
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 6.3e-121 438.3 396 63.1
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 9.0e-120 434.5 335 70.7
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 2.0e-119 433.3 512 52.3
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 2.6e-119 433.0 395 61.3
SalBow1G3823 Salvia bowleyana HOM05D005133 ORTHO05D006685 2.6e-119 433.0 359 68.0
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 3.4e-119 432.6 406 62.3
Lalb_Chr19g0138411 Lupinus albus HOM05D005133 ORTHO05D006685 1.1e-117 427.6 415 60.7
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 1.4e-117 427.2 413 60.8
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 4.2e-117 425.6 404 61.9
FvH4_7g15540 Fragaria vesca HOM05D005133 ORTHO05D006685 7.2e-117 424.9 386 60.6
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 2.1e-116 423.3 385 63.9
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 4.6e-116 422.2 416 60.6
FAN06G1776 Fragaria x ananassa HOM05D005133 ORTHO05D006685 1.0e-115 421.0 386 60.4
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 2.3e-115 419.9 449 57.9
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 3.0e-115 419.5 389 59.6
FAN10G2939 Fragaria x ananassa HOM05D005133 ORTHO05D006685 3.0e-115 419.5 389 60.4
FAN10G2725 Fragaria x ananassa HOM05D005133 ORTHO05D006685 1.1e-114 417.5 389 60.2
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 2.0e-114 416.8 424 58.7
TWI34G1432 Tripterygium wilfordii HOM05D005133 ORTHO05D006685 5.7e-114 415.2 393 58.8
Sc01g0003150 Simmondsia chinensis HOM05D005133 ORTHO05D006685 2.2e-113 413.3 406 60.6
Nn7g37315 Nelumbo nucifera HOM05D005133 ORTHO05D006685 3.1e-112 409.5 411 57.9
FAN06G1340 Fragaria x ananassa HOM05D005133 ORTHO05D006685 2.0e-111 406.8 396 58.1
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 2.6e-111 406.4 360 65.0
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 1.0e-110 404.4 408 57.8
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 1.3e-110 404.1 402 58.5
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 3.8e-110 402.5 356 65.7
ECA234G4221 Erigeron canadensis HOM05D005133 ORTHO05D006685 1.1e-109 401.0 408 59.6
Haze_15576 Corylus avellana HOM05D005133 ORTHO05D006685 1.9e-109 400.2 411 59.1
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 6.1e-108 395.2 373 63.0
EL10Ac1g00344 Beta vulgaris HOM05D005133 ORTHO05D006685 1.4e-107 394.0 404 56.9
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 1.5e-106 390.6 404 58.9
Hund27238 Selenicereus undatus HOM05D005133 ORTHO05D006685 1.1e-104 384.4 419 57.5
THA.LOC104817324 Tarenaya hassleriana HOM05D005133 ORTHO05D006685 1.4e-104 384.0 401 54.9
Haze_15581 Corylus avellana HOM05D005133 ORTHO05D006685 3.5e-103 379.4 409 57.7
Lsat_1_v5_gn_4_34900 Lactuca sativa HOM05D005133 ORTHO05D006685 1.0e-102 377.9 408 54.4
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 1.3e-102 377.5 381 60.6
Os01g0226500 Oryza sativa ssp. japonica HOM05D005133 ORTHO05D006685 1.3e-102 377.5 402 53.7
AUR62004420 Chenopodium quinoa HOM05D005133 ORTHO05D006685 6.5e-102 375.2 385 58.7
Eucgr.J01063 Eucalyptus grandis HOM05D005133 ORTHO05D006685 1.4e-101 374.0 395 54.2
Zm00001eb339090 Zea mays HOM05D005133 ORTHO05D006685 3.2e-101 372.9 443 53.0
vmacro20884 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 2.1e-100 370.2 504 48.2
AL4G45460 Arabidopsis lyrata HOM05D005133 ORTHO05D006685 1.3e-97 360.9 401 52.6
Aa31LG1G27580 Aethionema arabicum HOM05D005133 ORTHO05D006685 3.7e-97 359.4 407 52.6
A05p01630 Brassica napus HOM05D005133 ORTHO05D006685 1.1e-96 357.8 406 52.0
BcaC02g12500 Brassica carinata HOM05D005133 ORTHO05D006685 1.4e-96 357.5 406 52.2
C04p01840 Brassica napus HOM05D005133 ORTHO05D006685 1.4e-96 357.5 407 52.1
BraA05t19159Z Brassica rapa HOM05D005133 ORTHO05D006685 4.1e-96 355.9 406 52.0
Thhalv10001493m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 4.1e-96 355.9 390 53.1
Sp5g32810 Schrenkiella parvula HOM05D005133 ORTHO05D006685 4.1e-96 355.9 403 53.1
ATR0626G352 Amborella trichopoda HOM05D005133 ORTHO05D006685 2.6e-95 353.2 400 54.0
BcaC02g12707 Brassica carinata HOM05D005133 ORTHO05D006685 1.0e-94 351.3 392 51.3
Thhalv10028732m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 6.1e-92 342.0 408 51.2
Carub.0004s2888 Capsella rubella HOM05D005133 ORTHO05D006685 1.1e-88 331.3 401 48.6
MBI16_g41624_MAGBIO Magnolia biondii HOM05D005133 ORTHO05D006685 1.4e-88 330.9 409 52.1
vmacro13220 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 1.4e-88 330.9 332 60.5
CARHR141470 Cardamine hirsuta HOM05D005133 ORTHO05D006685 1.6e-87 327.4 418 48.6
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 1.4e-83 314.3 339 56.3
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 6.3e-81 305.4 294 61.2
AT2G46200 Arabidopsis thaliana HOM05D005133 ORTHO05D006685 6.6e-78 295.4 366 49.7
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 5.5e-77 292.4 395 49.6
vmacro22850 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 6.6e-70 268.9 348 49.4
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 4.4e-66 256.1 304 53.3
CDE09G0708 Ceratophyllum demersum HOM05D005133 ORTHO05D006685 4.1e-64 249.6 320 50.6
RcHm_v2.0_Chr1g0358051 Rosa chinensis HOM05D005133 ORTHO05D006685 2.7e-63 246.9 354 47.5
Pp3c4_26280 Physcomitrium patens HOM05D005133 ORTHO05D006685 2.3e-62 243.8 316 47.2
PSO478G1127 Papaver somniferum HOM05D005133 ORTHO05D006685 2.3e-59 233.8 234 61.5
Mapoly0001s0322 Marchantia polymorpha HOM05D005133 ORTHO05D006685 2.0e-58 230.7 441 39.7
arahy.Tifrunner.gnm1.ann1.Z00T6Z Arachis hypogaea HOM05D005133 ORTHO05D006685 1.6e-55 221.1 220 57.3
PSO384G2230 Papaver somniferum HOM05D005133 ORTHO05D006685 4.6e-55 219.5 237 54.4
AagrBONN_evm.TU.Sc2ySwM_344.4499 Anthoceros agrestis HOM05D005133 ORTHO05D006685 1.4e-43 181.4 419 35.8
Zm00001eb201120 Zea mays HOM05D005133 ORTHO05D006685 2.8e-36 157.1 152 59.2
Zm00001eb407270 Zea mays HOM05D005133 ORTHO05D006685 2.8e-36 157.1 152 59.2
FAN03G0151 Fragaria x ananassa HOM05D005133 ORTHO05D006685 3.0e-30 137.1 72 80.6
SMO239G0112 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 1.9e-29 134.4 351 31.9
CBR_g45167 Chara braunii HOM05D005133 ORTHO05D006685 2.9e-25 120.6 292 33.9
SHI13349 Sapria himalayana HOM05D005133 ORTHO05D006685 1.9e-24 117.9 143 48.3
HanXRQChr04g0107751 Helianthus annuus HOM05D005133 ORTHO05D006685 4.2e-24 116.7 98 72.4
Gohir.A03G093200 Gossypium hirsutum HOM05D005133 ORTHO05D006685 7.1e-24 115.9 165 46.7
Glyma.11G125567 Glycine max HOM05D005133 ORTHO05D006685 1.8e-22 111.3 126 50.8
vmacro01745 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 2.3e-22 110.9 150 47.3
Rhsim01G0168000 Rhododendron simsii HOM05D005133 ORTHO05D006685 2.4e-19 100.9 73 80.8
AUR62025074 Chenopodium quinoa HOM05D005133 ORTHO05D006685 1.6e-15 88.2 65 72.3
SMO117G0103 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 9.6e-13 79.0 181 36.5
C04p01870 Brassica napus HOM05D005133 ORTHO05D006685 1.6e-12 78.2 39 79.5
SMO114G0022 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 1.2e-10 72.0 93 47.3
FvH4_2g33570 Fragaria vesca HOM05D000073 ORTHO05D015767 1.3e-09 68.6 88 48.9
RcHm_v2.0_Chr1g0358101 Rosa chinensis HOM05D004139 ORTHO05D004873 1.1e-08 65.5 84 41.7
Rhsim01G0167900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-07 61.2 56 66.1
MELO3C033909.2 Cucumis melo HOM05D005133 ORTHO05D020525 5.1e-06 56.6 77 51.9


User provided reference genes

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