Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003498g0100 Nicotiana tabacum HOM05D006287 ORTHO05D008192 1.0e-105 386.7 192 100.0
Nitab4.5_0001669g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 6.5e-68 261.2 250 58.4
Nitab4.5_0000151g0190 Nicotiana tabacum HOM05D006287 ORTHO05D008192 8.5e-52 207.6 216 55.6
PGSC0003DMG400023145 Solanum tuberosum HOM05D006287 ORTHO05D008192 1.3e-47 193.7 270 45.2
Solyc08g067060.2 Solanum lycopersicum HOM05D006287 ORTHO05D008192 1.5e-35 153.7 252 41.3
Sopen08g021010 Solanum pennellii HOM05D006287 ORTHO05D008192 4.7e-34 148.7 251 40.6
Peaxi162Scf00341g00062 Petunia axillaris HOM05D006287 ORTHO05D008192 1.4e-30 137.1 216 42.1
CAN.G1030.29 Capsicum annuum HOM05D006287 ORTHO05D008192 7.0e-30 134.8 192 49.0
CAN.G98.23 Capsicum annuum HOM05D006287 ORTHO05D008192 1.1e-27 127.5 273 37.4
Nitab4.5_0008089g0010 Nicotiana tabacum HOM05D006287 ORTHO05D008192 4.1e-22 109.0 66 83.3
RcHm_v2.0_Chr4g0410561 Rosa chinensis HOM05D006287 ORTHO05D008192 4.1e-14 82.4 86 47.7
CSS0042508 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 2.0e-13 80.1 293 27.6
Oeu008766.1 Olea europaea HOM05D006287 ORTHO05D008192 2.3e-12 76.6 272 25.0
Haze_21571 Corylus avellana HOM05D006287 ORTHO05D008192 2.9e-12 76.3 86 46.5
Thecc.09G149000 Theobroma cacao HOM05D006287 ORTHO05D008192 5.0e-12 75.5 130 40.0
CiPaw.06G059600 Carya illinoinensis HOM05D006287 ORTHO05D008192 6.6e-12 75.1 88 43.2
DCAR_006447 Daucus carota HOM05D006287 ORTHO05D008192 3.3e-11 72.8 86 43.0
MSTRG.25851 Avicennia marina HOM05D006287 ORTHO05D008192 8.0e-10 68.2 86 39.5
Hma1.2p1_0007F.1_g005110 Hydrangea macrophylla HOM05D006287 ORTHO05D008192 2.3e-09 66.6 204 25.5
CARHR164980 Cardamine hirsuta HOM05D006287 ORTHO05D008192 3.1e-09 66.2 91 37.4
PGR142G2973 Punica granatum HOM05D006287 ORTHO05D008192 6.8e-09 65.1 73 45.2
Oeu030203.1 Olea europaea HOM05D006287 ORTHO05D000003 1.5e-08 63.9 71 50.7
RcHm_v2.0_Chr6g0264781 Rosa chinensis HOM05D006287 ORTHO05D008192 2.0e-08 63.5 92 39.1
MD12G1164900 Malus domestica HOM05D006287 ORTHO05D008192 3.4e-08 62.8 86 34.9
Nn5g27729 Nelumbo nucifera HOM05D006287 ORTHO05D008192 4.4e-08 62.4 81 39.5
Atru.chr7.2375 Acer truncatum HOM05D006287 ORTHO05D008192 7.5e-08 61.6 88 35.2
Sp4g21560 Schrenkiella parvula HOM05D006287 ORTHO05D008192 1.7e-07 60.5 82 37.8
SpUn0018_0110 Schrenkiella parvula HOM05D006287 ORTHO05D008192 1.7e-07 60.5 82 37.8
AUR62021186 Chenopodium quinoa HOM05D006287 ORTHO05D008192 6.4e-07 58.5 103 32.0
Sc25g0000480 Simmondsia chinensis HOM05D006287 ORTHO05D008192 1.1e-06 57.8 86 32.6
HPP92_023171 Vanilla planifolia HOM05D006287 ORTHO05D008192 1.1e-06 57.8 85 38.8
BcaNung04649 Brassica carinata HOM05D006287 ORTHO05D008192 1.9e-06 57.0 83 37.3
C08p30210 Brassica napus HOM05D006287 ORTHO05D008192 1.9e-06 57.0 83 37.3
Nn3g20345 Nelumbo nucifera HOM05D006287 ORTHO05D008192 1.9e-06 57.0 79 36.7
BcaB01g00140 Brassica carinata HOM05D006287 ORTHO05D008192 2.4e-06 56.6 86 36.0
CSS0048694 Camellia sinensis var. sinensis HOM05D006287 ORTHO05D008192 3.2e-06 56.2 263 27.0
BolC8t50627H Brassica oleracea HOM05D006287 ORTHO05D008192 5.4e-06 55.5 83 36.1
Gohir.D10G088500 Gossypium hirsutum HOM05D006287 ORTHO05D008192 5.4e-06 55.5 71 39.4
Lsat_1_v5_gn_6_22161 Lactuca sativa HOM05D006287 ORTHO05D008192 5.4e-06 55.5 164 29.3
AUR62015978 Chenopodium quinoa HOM05D006287 ORTHO05D008192 7.0e-06 55.1 103 30.1
Ciclev10010816m.g Citrus clementina HOM05D006287 ORTHO05D008192 9.2e-06 54.7 50 48.0


User provided reference genes

Program Settings