Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003497g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 5.8e-112 407.5 201 100.0
Nitab4.5_0003113g0010 Nicotiana tabacum HOM05D005943 ORTHO05D007328 2.1e-85 319.3 183 91.3
Solyc01g099890.3 Solanum lycopersicum HOM05D005943 ORTHO05D007328 5.0e-79 298.1 155 96.8
Sopen01g043410 Solanum pennellii HOM05D005943 ORTHO05D007328 5.0e-79 298.1 155 96.8
Cc02_g34350 Coffea canephora HOM05D005943 ORTHO05D007328 1.9e-78 296.2 157 93.6
Eucgr.L02935 Eucalyptus grandis HOM05D005943 ORTHO05D007328 4.2e-78 295.0 155 94.8
MSTRG.4510 Avicennia marina HOM05D005943 ORTHO05D007328 2.7e-77 292.4 155 93.5
Cpa.g.sc48.107 Carica papaya HOM05D005943 ORTHO05D007328 2.7e-77 292.4 157 93.6
Ciclev10002634m.g Citrus clementina HOM05D005943 ORTHO05D007328 3.6e-77 292.0 155 93.5
unitig_0.g32 Utricularia gibba HOM05D005943 ORTHO05D007328 4.7e-77 291.6 158 91.1
Potri.013G013700 Populus trichocarpa HOM05D005943 ORTHO05D007328 8.0e-77 290.8 155 93.5
PGSC0003DMG400024722 Solanum tuberosum HOM05D005943 ORTHO05D007328 1.0e-76 290.4 155 94.2
MD04G1198400 Malus domestica HOM05D005943 ORTHO05D007328 1.4e-76 290.0 165 89.1
Dinv40356 Davidia involucrata HOM05D005943 ORTHO05D007328 2.3e-76 289.3 155 92.3
MD12G1211900 Malus domestica HOM05D005943 ORTHO05D007328 2.3e-76 289.3 155 92.9
HanXRQChr11g0339821 Helianthus annuus HOM05D005943 ORTHO05D007328 4.0e-76 288.5 155 92.9
CSS0008719 Camellia sinensis var. sinensis HOM05D005943 ORTHO05D007328 5.2e-76 288.1 155 92.3
CANSAT35G1584 Cannabis sativa HOM05D005943 ORTHO05D007328 5.2e-76 288.1 155 91.6
Dinv30834 Davidia involucrata HOM05D005943 ORTHO05D007328 5.2e-76 288.1 155 92.3
Potri.005G023600 Populus trichocarpa HOM05D005943 ORTHO05D007328 5.2e-76 288.1 157 91.7
PGR031G0471 Punica granatum HOM05D005943 ORTHO05D007328 5.2e-76 288.1 155 92.9
CsaV3_1G038680 Cucumis sativus L. HOM05D005943 ORTHO05D007328 6.7e-76 287.7 155 92.3
RcHm_v2.0_Chr3g0456101 Rosa chinensis HOM05D005943 ORTHO05D007328 8.8e-76 287.3 155 92.9
TWI56G0702 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 8.8e-76 287.3 155 92.3
CiPaw.07G023200 Carya illinoinensis HOM05D005943 ORTHO05D007328 1.2e-75 287.0 155 91.6
Thecc.05G315300 Theobroma cacao HOM05D005943 ORTHO05D007328 1.2e-75 287.0 155 91.6
AUR62005222 Chenopodium quinoa HOM05D005943 ORTHO05D007328 2.0e-75 286.2 155 91.0
Duzib177G0451 Durio zibethinus HOM05D005943 ORTHO05D007328 2.0e-75 286.2 155 91.6
Migut.E01764 Erythranthe guttata HOM05D005943 ORTHO05D007328 2.0e-75 286.2 155 91.6
TWI12G0949 Tripterygium wilfordii HOM05D005943 ORTHO05D007328 2.6e-75 285.8 155 92.3
ATR0796G119 Amborella trichopoda HOM05D005943 ORTHO05D007328 4.4e-75 285.0 155 91.6
Ca_16733_v3 Cicer arietinum L. HOM05D005943 ORTHO05D007328 5.7e-75 284.6 156 89.7
Duzib128G1848 Durio zibethinus HOM05D005943 ORTHO05D007328 5.7e-75 284.6 155 91.0
Gohir.A11G269200 Gossypium hirsutum HOM05D005943 ORTHO05D007328 5.7e-75 284.6 155 91.0
Gohir.D11G279400 Gossypium hirsutum HOM05D005943 ORTHO05D007328 5.7e-75 284.6 155 91.0
Nn4g25770 Nelumbo nucifera HOM05D005943 ORTHO05D007328 5.7e-75 284.6 159 88.1
Sc06g0003910 Simmondsia chinensis HOM05D005943 ORTHO05D007328 5.7e-75 284.6 155 91.0
Aqoxy5G00777 Aquilegia oxysepala HOM05D005943 ORTHO05D007328 7.5e-75 284.3 155 90.3
ECA236G0332 Erigeron canadensis HOM05D005943 ORTHO05D007328 7.5e-75 284.3 155 91.0
GSVIVG01031169001 Vitis vinifera HOM05D005943 ORTHO05D007328 9.7e-75 283.9 155 89.7
Gorai.007G301600 Gossypium raimondii HOM05D005943 ORTHO05D007328 1.3e-74 283.5 155 90.3
Prupe.6G319400 Prunus persica HOM05D005943 ORTHO05D007328 1.3e-74 283.5 155 91.6
Lalb_Chr11g0067091 Lupinus albus HOM05D005943 ORTHO05D007328 2.2e-74 282.7 156 88.5
Manes.08G116100 Manihot esculenta HOM05D005943 ORTHO05D007328 2.8e-74 282.3 155 89.7
TPR.G33656 Trifolium pratense HOM05D005943 ORTHO05D007328 2.8e-74 282.3 154 89.6
arahy.Tifrunner.gnm1.ann1.KZ6QJ9 Arachis hypogaea HOM05D005943 ORTHO05D007328 3.7e-74 282.0 155 89.0
Glyma.06G132000 Glycine max HOM05D005943 ORTHO05D007328 3.7e-74 282.0 155 89.0
QL03p019642 Quercus lobata HOM05D005943 ORTHO05D007328 3.7e-74 282.0 157 89.8
Lj1g0013041 Lotus japonicus HOM05D005943 ORTHO05D007328 4.8e-74 281.6 155 89.7
Lalb_Chr23g0271691 Lupinus albus HOM05D005943 ORTHO05D007328 4.8e-74 281.6 155 89.0
Phvul.009G047900 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 4.8e-74 281.6 155 89.0
Sed0012379 Sechium edule HOM05D005943 ORTHO05D007328 4.8e-74 281.6 155 90.3
HPP92_018258 Vanilla planifolia HOM05D005943 ORTHO05D007328 4.8e-74 281.6 155 89.0
Lj7A623G46 Lonicera japonica HOM05D005943 ORTHO05D007328 8.2e-74 280.8 151 92.1
Sabra13G0012200 Salix brachista HOM05D001727 ORTHO05D007328 8.2e-74 280.8 155 89.7
COL.COLO4_10548 Corchorus olitorius HOM05D005943 ORTHO05D007328 1.1e-73 280.4 152 91.4
Glyma.04G232900 Glycine max HOM05D005943 ORTHO05D007328 1.1e-73 280.4 155 89.0
Sed0027178 Sechium edule HOM05D005943 ORTHO05D007328 1.1e-73 280.4 157 89.2
Haze_04120 Corylus avellana HOM05D005943 ORTHO05D007328 1.4e-73 280.0 151 91.4
MELO3C015293.2 Cucumis melo HOM05D001727 ORTHO05D001758 2.4e-73 279.3 152 90.8
Psat3g152320 Pisum sativum HOM05D005943 ORTHO05D007328 2.4e-73 279.3 155 87.7
Oeu048875.1 Olea europaea HOM05D005943 ORTHO05D007328 3.1e-73 278.9 150 92.0
SGA_v2.0_scaffold42G16032 Striga asiatica HOM05D005943 ORTHO05D007328 3.1e-73 278.9 172 83.7
Nn3g21529 Nelumbo nucifera HOM05D005943 ORTHO05D007328 4.1e-73 278.5 155 86.5
Lsat_1_v5_gn_7_72860 Lactuca sativa HOM05D005943 ORTHO05D007328 7.0e-73 277.7 152 90.1
PSO170G5805 Papaver somniferum HOM05D005943 ORTHO05D007328 7.0e-73 277.7 155 88.4
PSO407G0008 Papaver somniferum HOM05D005943 ORTHO05D007328 7.0e-73 277.7 155 88.4
Atru.chr2.102 Acer truncatum HOM05D001727 ORTHO05D001758 9.1e-73 277.3 151 90.7
AUR62000742 Chenopodium quinoa HOM05D005943 ORTHO05D007328 9.1e-73 277.3 155 87.1
CDE02G2801 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 1.2e-72 276.9 155 87.7
Mapoly0028s0141 Marchantia polymorpha HOM05D005943 ORTHO05D007328 1.2e-72 276.9 157 86.6
Sabra05G0029200 Salix brachista HOM05D001727 ORTHO05D050481 1.2e-72 276.9 154 90.3
DCAR_022176 Daucus carota HOM05D005943 ORTHO05D007328 2.0e-72 276.2 167 83.8
AagrBONN_evm.TU.Sc2ySwM_228.5507 Anthoceros agrestis HOM05D005943 ORTHO05D007328 2.7e-72 275.8 155 86.5
Os01g0314300 Oryza sativa ssp. japonica HOM05D005943 ORTHO05D007328 2.7e-72 275.8 155 87.7
Hund07108 Selenicereus undatus HOM05D005943 ORTHO05D007328 3.5e-72 275.4 151 90.1
Medtr3g091920 Medicago truncatula HOM05D005943 ORTHO05D007328 4.5e-72 275.0 152 88.2
THA.LOC104805894 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 1.7e-71 273.1 157 85.4
Rhsim05G0137500 Rhododendron simsii HOM05D005943 ORTHO05D007328 2.2e-71 272.7 175 80.0
Thhalv10008886m.g Eutrema salsugineum HOM05D005943 ORTHO05D007328 2.9e-71 272.3 157 87.3
Peaxi162Scf00037g01419 Petunia axillaris HOM05D005943 ORTHO05D007328 3.8e-71 271.9 153 92.2
Sp1g07730 Schrenkiella parvula HOM05D005943 ORTHO05D007328 5.0e-71 271.6 157 86.6
CARHR009020 Cardamine hirsuta HOM05D005943 ORTHO05D007328 1.1e-70 270.4 157 86.0
Pp3c25_690 Physcomitrium patens HOM05D005943 ORTHO05D007328 1.1e-70 270.4 157 83.4
BcaC05g24766 Brassica carinata HOM05D005943 ORTHO05D007328 1.5e-70 270.0 157 86.6
BraA06t23801Z Brassica rapa HOM05D005943 ORTHO05D007328 1.5e-70 270.0 157 86.6
AT1G09150 Arabidopsis thaliana HOM05D005943 ORTHO05D007328 7.2e-70 267.7 157 86.0
Carub.0001s0844 Capsella rubella HOM05D005943 ORTHO05D007328 7.2e-70 267.7 157 85.4
Aa31sc55G100 Aethionema arabicum HOM05D005943 ORTHO05D007328 9.4e-70 267.3 155 85.8
AL1G19590 Arabidopsis lyrata HOM05D005943 ORTHO05D007328 9.4e-70 267.3 157 85.4
BolC8t48886H Brassica oleracea HOM05D005943 ORTHO05D007328 2.7e-69 265.8 168 80.4
EL10Ac4g09897 Beta vulgaris HOM05D005943 ORTHO05D007328 4.7e-69 265.0 155 87.1
THA.LOC104820740 Tarenaya hassleriana HOM05D005943 ORTHO05D007328 8.0e-69 264.2 153 86.9
C08p12460 Brassica napus HOM05D005943 ORTHO05D007328 1.0e-68 263.8 154 85.1
A06p05940 Brassica napus HOM05D005943 ORTHO05D007328 1.8e-68 263.1 154 85.7
C05p07140 Brassica napus HOM05D005943 ORTHO05D007328 1.8e-68 263.1 154 85.7
C08p12470 Brassica napus HOM05D005943 ORTHO05D007328 3.0e-68 262.3 154 85.1
A08p34800 Brassica napus HOM05D005943 ORTHO05D007328 6.8e-68 261.2 154 84.4
MD04G1083700 Malus domestica HOM05D005943 ORTHO05D007328 7.5e-67 257.7 181 76.2
FAN02G3650 Fragaria x ananassa HOM05D005943 ORTHO05D007328 3.8e-63 245.4 145 84.1
FAN09G2521 Fragaria x ananassa HOM05D005943 ORTHO05D007328 5.0e-63 245.0 136 89.7
SMO169G0068 Selaginella moellendorffii HOM05D005943 ORTHO05D007328 1.0e-60 237.3 156 76.3
arahy.Tifrunner.gnm1.ann1.2NZ4WG Arachis hypogaea HOM05D000716 ORTHO05D004822 6.8e-60 234.6 126 88.1
BcaC07g38477 Brassica carinata HOM05D005943 ORTHO05D007328 8.9e-60 234.2 158 77.8
VMungo1309G2765 Vigna mungo HOM05D005943 ORTHO05D007328 3.4e-59 232.3 171 70.2
SalBow1G5257 Salvia bowleyana HOM05D005943 ORTHO05D007328 4.1e-57 225.3 154 76.0
CDE09G0522 Ceratophyllum demersum HOM05D005943 ORTHO05D007328 3.5e-56 222.2 121 87.6
BraA08t35391Z Brassica rapa HOM05D005943 ORTHO05D007328 1.2e-53 213.8 119 87.4
FvH4_6g06770 Fragaria vesca HOM05D005943 ORTHO05D007328 2.3e-52 209.5 162 73.5
Atru.chr6.2339 Acer truncatum HOM05D005943 ORTHO05D007328 9.8e-51 204.1 154 71.4
vmacro19698 Vaccinium macrocarpon HOM05D005943 ORTHO05D007328 2.0e-48 196.4 100 93.0
Zm00001eb339860 Zea mays HOM05D005943 ORTHO05D007328 2.0e-48 196.4 103 93.2
SEGI_36457 Sequoiadendron giganteum HOM05D005943 ORTHO05D007328 6.6e-47 191.4 100 90.0
PRCOL_00003880 Prasinoderma coloniale HOM05D005943 ORTHO05D007328 8.6e-47 191.0 159 59.7
Haze_26177 Corylus avellana HOM05D005943 ORTHO05D007328 3.6e-45 185.7 156 57.1
Duzib106G1343 Durio zibethinus HOM05D005943 ORTHO05D007328 1.2e-43 180.6 176 59.1
MCO12G098 Micromonas commoda HOM05D005943 ORTHO05D007328 1.7e-42 176.8 161 57.8
TAR633G1587 Trochodendron aralioides HOM05D005943 ORTHO05D007328 5.4e-41 171.8 153 62.1
Eucgr.H03253 Eucalyptus grandis HOM05D005943 ORTHO05D007328 5.2e-36 155.2 78 97.4
Phvul.009G047833 Phaseolus vulgaris HOM05D005943 ORTHO05D007328 2.2e-34 149.8 78 92.3
Cre50.g761397 Chlamydomonas reinhardtii HOM05D005943 ORTHO05D007328 2.9e-34 149.4 127 59.1
MBI18_g25341_MAGBIO Magnolia biondii HOM05D005943 ORTHO05D007328 4.9e-34 148.7 78 93.6
TAR362G1289 Trochodendron aralioides HOM05D005943 ORTHO05D007328 4.9e-34 148.7 78 93.6
CBR_g20980 Chara braunii HOM05D005943 ORTHO05D007328 2.4e-33 146.4 108 70.4
Eucgr.H03239 Eucalyptus grandis HOM05D005943 ORTHO05D007328 8.1e-29 131.3 67 94.0
HPP92_018260 Vanilla planifolia HOM05D005943 ORTHO05D007328 8.1e-29 131.3 73 89.0
Eucgr.H03249 Eucalyptus grandis HOM05D005943 ORTHO05D007328 4.0e-28 129.0 100 68.0
CBR_g36436 Chara braunii HOM05D005943 ORTHO05D007328 3.2e-25 119.4 70 82.9
BcaC07g38474 Brassica carinata HOM05D005943 ORTHO05D007328 1.2e-24 117.5 67 86.6
EL10Ac5g11162 Beta vulgaris HOM05D005943 ORTHO05D007328 2.1e-24 116.7 77 79.2
Eucgr.H03250 Eucalyptus grandis HOM05D005943 ORTHO05D007328 6.6e-23 111.7 70 81.4
Eucgr.H03245 Eucalyptus grandis HOM05D005943 ORTHO05D007328 9.3e-17 91.3 65 76.9
ClCG03G017220 Citrullus lanatus HOM05D001727 ORTHO05D001758 3.5e-16 89.4 45 95.6
SEGI_40081 Sequoiadendron giganteum HOM05D005943 ORTHO05D007328 2.1e-13 80.1 49 79.6
Phvul.011G215800 Phaseolus vulgaris HOM05D005117 ORTHO05D005956 2.4e-09 66.6 159 30.2
VMungo1127G0019 Vigna mungo HOM05D005117 ORTHO05D005956 9.3e-09 64.7 159 29.6
MSTRG.25503 Avicennia marina HOM05D005117 ORTHO05D005956 3.5e-08 62.8 159 28.9
CBR_g6708 Chara braunii HOM05D005117 ORTHO05D005956 4.6e-08 62.4 158 31.0
Manes.18G111600 Manihot esculenta HOM05D005117 ORTHO05D005956 7.9e-08 61.6 159 27.0
Ciclev10019359m.g Citrus clementina HOM05D005117 ORTHO05D005956 1.8e-07 60.5 159 27.0
TWI12G0486 Tripterygium wilfordii HOM05D005117 ORTHO05D005956 3.0e-07 59.7 159 27.0
Zm00001eb243900 Zea mays HOM05D005117 ORTHO05D005956 2.5e-06 56.6 158 28.5
Lj9A696G55 Lonicera japonica HOM05D005117 ORTHO05D005956 5.6e-06 55.5 175 24.6


User provided reference genes

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