Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003490g0040 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.3e-34 149.1 68 100.0
CAN.G48.41 Capsicum annuum HOM05D004234 ORTHO05D004670 1.8e-17 92.0 46 89.1
Peaxi162Scf00241g00030 Petunia axillaris HOM05D004234 ORTHO05D004670 4.5e-16 87.4 46 87.0
Solyc03g093300.3 Solanum lycopersicum HOM05D004234 ORTHO05D004670 7.7e-16 86.7 46 84.8
Sopen03g024080 Solanum pennellii HOM05D004234 ORTHO05D004670 7.7e-16 86.7 46 84.8
Oeu028187.2 Olea europaea HOM05D004234 ORTHO05D004670 4.7e-13 77.4 43 79.1
arahy.Tifrunner.gnm1.ann1.11333K Arachis hypogaea HOM05D004234 ORTHO05D004670 1.5e-11 72.4 44 75.0
arahy.Tifrunner.gnm1.ann1.WXBJ4D Arachis hypogaea HOM05D004234 ORTHO05D004670 1.5e-11 72.4 44 75.0
Dinv06568 Davidia involucrata HOM05D004234 ORTHO05D004670 1.5e-11 72.4 41 78.0
Prupe.2G276000 Prunus persica HOM05D004234 ORTHO05D004670 1.5e-11 72.4 44 72.7
Lsat_1_v5_gn_1_117520 Lactuca sativa HOM05D004234 ORTHO05D004670 2.6e-11 71.6 41 75.6
ECA233G5771 Erigeron canadensis HOM05D004234 ORTHO05D004670 3.4e-11 71.2 41 75.6
MD07G1252500 Malus domestica HOM05D004234 ORTHO05D004670 3.4e-11 71.2 41 73.2
CSS0018772 Camellia sinensis var. sinensis HOM05D004234 ORTHO05D004670 5.7e-11 70.5 41 78.0
Lalb_Chr01g0000341 Lupinus albus HOM05D004234 ORTHO05D004670 7.5e-11 70.1 45 71.1
RcHm_v2.0_Chr1g0331961 Rosa chinensis HOM05D004234 ORTHO05D004670 1.3e-10 69.3 41 73.2
Dinv16843 Davidia involucrata HOM05D004234 ORTHO05D004670 1.7e-10 68.9 41 73.2
Actinidia13581 Actinidia chinensis HOM05D004234 ORTHO05D004670 2.2e-10 68.6 38 76.3
MD01G1182200 Malus domestica HOM05D004234 ORTHO05D004670 2.2e-10 68.6 41 73.2
AUR62015488 Chenopodium quinoa HOM05D004234 ORTHO05D004670 3.7e-10 67.8 35 85.7
FvH4_7g05310 Fragaria vesca HOM05D004234 ORTHO05D004670 3.7e-10 67.8 44 68.2
FAN01G2714 Fragaria x ananassa HOM05D004234 ORTHO05D004670 3.7e-10 67.8 44 68.2
FAN03G3162 Fragaria x ananassa HOM05D004234 ORTHO05D004670 3.7e-10 67.8 44 68.2
FAN10G4258 Fragaria x ananassa HOM05D004234 ORTHO05D004670 3.7e-10 67.8 44 68.2
SGA_v2.0_scaffold2G01218 Striga asiatica HOM05D004234 ORTHO05D004670 3.7e-10 67.8 41 70.7
PGR042G3222 Punica granatum HOM05D004234 ORTHO05D004670 4.8e-10 67.4 45 66.7
unitig_46.g18765 Utricularia gibba HOM05D004234 ORTHO05D004670 4.8e-10 67.4 37 83.8
Cc02_g04370 Coffea canephora HOM05D004234 ORTHO05D004670 6.3e-10 67.0 38 78.9
FvH4_2g12100 Fragaria vesca HOM05D004234 ORTHO05D004670 6.3e-10 67.0 35 82.9
Ca_25531_v3 Cicer arietinum L. HOM05D004234 ORTHO05D004670 8.3e-10 66.6 42 71.4
Thecc.03G153900 Theobroma cacao HOM05D004234 ORTHO05D004670 8.3e-10 66.6 41 70.7
Migut.F00484 Erythranthe guttata HOM05D004234 ORTHO05D004670 1.1e-09 66.2 41 75.6
Manes.06G133800 Manihot esculenta HOM05D004234 ORTHO05D004670 1.1e-09 66.2 41 73.2
Rhsim09G0190900 Rhododendron simsii HOM05D004234 ORTHO05D004670 1.1e-09 66.2 41 73.2
Ah.07g207720 Amaranthus hybridus HOM05D004234 ORTHO05D004670 1.4e-09 65.9 36 80.6
Ciclev10004769m.g Citrus clementina HOM05D004234 ORTHO05D004670 1.4e-09 65.9 41 68.3
DCAR_014620 Daucus carota HOM05D004234 ORTHO05D004670 1.4e-09 65.9 35 82.9
Hma1.2p1_0432F.1_g151850 Hydrangea macrophylla HOM05D004234 ORTHO05D004670 1.4e-09 65.9 41 73.2
Psat7g159560 Pisum sativum HOM05D004234 ORTHO05D004670 1.4e-09 65.9 42 69.0
Sed0010040 Sechium edule HOM05D004234 ORTHO05D004670 1.4e-09 65.9 44 63.6
Actinidia31776 Actinidia chinensis HOM05D004234 ORTHO05D004670 1.8e-09 65.5 35 82.9
EL10Ac3g05852 Beta vulgaris HOM05D004234 ORTHO05D004670 1.8e-09 65.5 35 82.9
MELO3C003311.2 Cucumis melo HOM05D004234 ORTHO05D004670 1.8e-09 65.5 44 65.9
CsaV3_3G050070 Cucumis sativus L. HOM05D004234 ORTHO05D004670 1.8e-09 65.5 44 65.9
Medtr4g036835 Medicago truncatula HOM05D004234 ORTHO05D004670 1.8e-09 65.5 42 71.4
Nn6g33942 Nelumbo nucifera HOM05D004234 ORTHO05D004670 1.8e-09 65.5 37 78.4
SEGI_33806 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 1.8e-09 65.5 30 93.3
Gohir.D03G106600 Gossypium hirsutum HOM05D004234 ORTHO05D004670 2.4e-09 65.1 41 68.3
PSO210G3536 Papaver somniferum HOM05D004234 ORTHO05D004670 2.4e-09 65.1 41 70.7
HanXRQChr05g0142531 Helianthus annuus HOM05D004234 ORTHO05D004670 3.1e-09 64.7 30 93.3
TAR636G1879 Trochodendron aralioides HOM05D004234 ORTHO05D004670 3.1e-09 64.7 46 67.4
GSVIVG01014047001 Vitis vinifera HOM05D004234 ORTHO05D004670 3.1e-09 64.7 41 70.7
PSO238G0034 Papaver somniferum HOM05D004234 ORTHO05D004670 4.1e-09 64.3 35 80.0
Potri.001G125700 Populus trichocarpa HOM05D004234 ORTHO05D004670 4.1e-09 64.3 39 74.4
Aqoxy1G01638 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 5.4e-09 63.9 35 80.0
Aqoxy5G04150 Aquilegia oxysepala HOM05D004234 ORTHO05D004670 5.4e-09 63.9 35 80.0
Lsat_1_v5_gn_8_8740 Lactuca sativa HOM05D004234 ORTHO05D004670 5.4e-09 63.9 41 68.3
HPP92_020352 Vanilla planifolia HOM05D004234 ORTHO05D004670 5.4e-09 63.9 41 70.7
Atru.chr1.756 Acer truncatum HOM05D004234 ORTHO05D004670 7.0e-09 63.5 40 75.0
Lj3g0001566 Lotus japonicus HOM05D004234 ORTHO05D004670 7.0e-09 63.5 42 69.0
Nn1g00980 Nelumbo nucifera HOM05D004234 ORTHO05D004670 7.0e-09 63.5 35 80.0
QL09p005405 Quercus lobata HOM05D004234 ORTHO05D004670 9.1e-09 63.2 41 68.3
Sed0020354 Sechium edule HOM05D004234 ORTHO05D004670 9.1e-09 63.2 44 61.4
Gohir.A03G059300 Gossypium hirsutum HOM05D004234 ORTHO05D004670 1.2e-08 62.8 41 65.9
Potri.003G108000 Populus trichocarpa HOM05D004234 ORTHO05D004670 1.2e-08 62.8 41 70.7
TWI39G0359 Tripterygium wilfordii HOM05D004234 ORTHO05D004670 1.2e-08 62.8 38 73.7
ClCG09G013080 Citrullus lanatus HOM05D004234 ORTHO05D004670 2.0e-08 62.0 44 61.4
Lj1A979T78 Lonicera japonica HOM05D004234 ORTHO05D004670 2.0e-08 62.0 42 69.0
Glyma.09G229600 Glycine max HOM05D004234 ORTHO05D004670 3.5e-08 61.2 30 86.7
Glyma.12G006700 Glycine max HOM05D004234 ORTHO05D004670 3.5e-08 61.2 30 86.7
Phvul.011G007500 Phaseolus vulgaris HOM05D004234 ORTHO05D004670 3.5e-08 61.2 30 86.7
VMungo1127G0923 Vigna mungo HOM05D004234 ORTHO05D004670 3.5e-08 61.2 30 86.7
FvH4_5g28373 Fragaria vesca HOM05D004234 ORTHO05D004670 7.7e-08 60.1 45 57.8
Aa31LG11G1950 Aethionema arabicum HOM05D004234 ORTHO05D004670 1.0e-07 59.7 43 60.5
BcaC06g33149 Brassica carinata HOM05D004234 ORTHO05D004670 1.0e-07 59.7 45 64.4
BcaC06g33234 Brassica carinata HOM05D004234 ORTHO05D004670 1.0e-07 59.7 45 64.4
A03p47040 Brassica napus HOM05D004234 ORTHO05D004670 1.0e-07 59.7 45 64.4
C07p45120 Brassica napus HOM05D004234 ORTHO05D004670 1.0e-07 59.7 45 64.4
BolC7t45034H Brassica oleracea HOM05D004234 ORTHO05D004670 1.0e-07 59.7 45 64.4
BraA03t13827Z Brassica rapa HOM05D004234 ORTHO05D004670 1.0e-07 59.7 45 64.4
C07p40880 Brassica napus HOM05D004234 ORTHO05D004670 1.3e-07 59.3 37 73.0
Sopen06g015930 Solanum pennellii HOM05D004234 ORTHO05D000001 1.7e-07 58.9 30 80.0
Mapoly0072s0015 Marchantia polymorpha HOM05D004234 ORTHO05D004670 2.3e-07 58.5 30 83.3
Pp3c14_12080 Physcomitrium patens HOM05D004234 ORTHO05D004670 2.3e-07 58.5 31 74.2
AT5G61450 Arabidopsis thaliana HOM05D004234 ORTHO05D004670 2.9e-07 58.2 30 86.7
BolC1t03363H Brassica oleracea HOM05D004234 ORTHO05D004670 2.9e-07 58.2 30 86.7
BolC7t44614H Brassica oleracea HOM05D004234 ORTHO05D004670 2.9e-07 58.2 45 62.2
Carub.0008s2213 Capsella rubella HOM05D004234 ORTHO05D004670 2.9e-07 58.2 30 86.7
CARHR275210 Cardamine hirsuta HOM05D004234 ORTHO05D004670 2.9e-07 58.2 30 86.7
Thhalv10004229m.g Eutrema salsugineum HOM05D004234 ORTHO05D004670 2.9e-07 58.2 30 86.7
Lsat_1_v5_gn_9_51980 Lactuca sativa HOM05D004234 ORTHO05D004670 2.9e-07 58.2 38 68.4
Sp2g24650 Schrenkiella parvula HOM05D004234 ORTHO05D004670 2.9e-07 58.2 30 86.7
arahy.Tifrunner.gnm1.ann1.EHKS3S Arachis hypogaea HOM05D004234 ORTHO05D004670 3.8e-07 57.8 36 69.4
BcaNung02453 Brassica carinata HOM05D004234 ORTHO05D004670 3.8e-07 57.8 45 60.0
Pp3c17_11550 Physcomitrium patens HOM05D004234 ORTHO05D004670 3.8e-07 57.8 31 71.0
Pp3c2_13380 Physcomitrium patens HOM05D004234 ORTHO05D004670 3.8e-07 57.8 31 71.0
Prupe.2G276100 Prunus persica HOM05D004234 ORTHO05D004670 5.0e-07 57.4 46 54.3
Nitab4.5_0002816g0120 Nicotiana tabacum HOM05D004234 ORTHO05D004670 6.6e-07 57.0 25 100.0
Os03g0102400 Oryza sativa ssp. japonica HOM05D004234 ORTHO05D004670 8.6e-07 56.6 30 80.0
ATR0317G048 Amborella trichopoda HOM05D004234 ORTHO05D004670 1.1e-06 56.2 32 75.0
Zm00001eb404400 Zea mays HOM05D004234 ORTHO05D004670 1.1e-06 56.2 30 76.7
Lsat_1_v5_gn_1_117561 Lactuca sativa HOM05D004234 ORTHO05D004670 1.5e-06 55.8 27 88.9
SalBow8G0184 Salvia bowleyana HOM05D004234 ORTHO05D004670 1.5e-06 55.8 53 54.7
SalBow8G4519 Salvia bowleyana HOM05D004234 ORTHO05D004670 1.5e-06 55.8 53 54.7
Medtr1g056720 Medicago truncatula HOM05D004234 ORTHO05D004670 1.9e-06 55.5 32 71.9
Nitab4.5_0000262g0110 Nicotiana tabacum HOM05D004234 ORTHO05D004670 1.9e-06 55.5 30 73.3
Sabra03G0074900 Salix brachista HOM05D004234 ORTHO05D004670 2.5e-06 55.1 28 82.1


User provided reference genes

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