Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.2e-134 483.0 228 100.0
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 5.4e-122 441.0 228 92.1
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 2.0e-116 422.5 277 74.0
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 8.4e-115 417.2 246 79.7
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 9.2e-114 413.7 240 80.0
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 2.3e-112 409.1 246 79.3
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 4.4e-108 394.8 246 77.6
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.9e-79 299.7 210 66.7
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 3.3e-79 298.9 227 61.7
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.3e-78 297.0 230 61.3
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.3e-78 297.0 238 62.6
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 2.6e-76 289.3 229 58.5
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 4.5e-76 288.5 227 59.9
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 1.0e-75 287.3 231 60.2
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 2.2e-75 286.2 229 59.0
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 8.5e-75 284.3 229 59.0
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 9.4e-74 280.8 231 59.7
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 9.4e-74 280.8 231 59.7
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 2.1e-73 279.6 212 60.8
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 3.6e-73 278.9 229 57.6
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 1.0e-72 277.3 229 57.2
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 2.3e-72 276.2 227 56.8
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 6.7e-72 274.6 230 57.8
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 4.3e-71 271.9 209 60.8
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 5.7e-71 271.6 213 60.1
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.3e-70 270.4 209 59.3
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 1.7e-70 270.0 229 55.5
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 4.8e-70 268.5 232 55.6
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 6.3e-70 268.1 226 58.0
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 6.3e-70 268.1 216 60.2
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 8.2e-70 267.7 229 55.0
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.1e-69 267.3 230 53.5
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 3.1e-69 265.8 215 56.3
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 4.1e-69 265.4 236 55.5
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 5.3e-69 265.0 229 56.3
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 6.9e-69 264.6 206 59.7
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 9.1e-69 264.2 213 60.6
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 1.2e-68 263.8 231 58.4
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.2e-68 263.8 230 55.7
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 1.5e-68 263.5 229 55.0
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 2.0e-68 263.1 231 53.7
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 2.6e-68 262.7 215 60.0
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 3.4e-68 262.3 235 54.9
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 3.4e-68 262.3 214 60.7
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 5.9e-68 261.5 231 58.0
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 5.9e-68 261.5 213 57.7
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 1.3e-67 260.4 230 56.1
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 2.2e-67 259.6 217 56.7
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 3.8e-67 258.8 217 57.6
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 5.0e-67 258.5 220 60.5
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 6.5e-67 258.1 233 57.1
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 8.5e-67 257.7 233 57.1
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 8.5e-67 257.7 232 53.9
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 1.9e-66 256.5 230 55.7
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 2.5e-66 256.1 235 55.3
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 2.5e-66 256.1 215 56.7
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 5.5e-66 255.0 258 51.9
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 7.2e-66 254.6 220 56.8
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 2.1e-65 253.1 184 65.2
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 2.7e-65 252.7 196 59.7
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 1.0e-64 250.8 230 54.8
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.3e-64 249.6 230 52.6
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 3.9e-64 248.8 233 54.5
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 3.9e-64 248.8 236 49.6
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 5.1e-64 248.4 214 55.1
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 8.8e-64 247.7 237 52.7
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 1.1e-63 247.3 224 55.4
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 2.6e-63 246.1 224 55.8
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 2.6e-63 246.1 225 54.7
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 3.3e-63 245.7 234 52.6
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 3.3e-63 245.7 225 53.8
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 1.3e-62 243.8 235 52.8
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 1.7e-62 243.4 236 49.2
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 4.8e-62 241.9 236 48.7
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 6.3e-62 241.5 226 53.5
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 1.1e-61 240.7 228 53.1
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 1.4e-61 240.4 204 57.8
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 1.8e-61 240.0 260 49.2
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 3.1e-61 239.2 224 54.9
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 3.1e-61 239.2 254 50.0
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 1.2e-60 237.3 212 55.2
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 1.2e-60 237.3 212 55.2
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 2.0e-60 236.5 251 50.6
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 2.6e-60 236.1 250 48.4
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 2.6e-60 236.1 229 53.3
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 1.3e-59 233.8 184 57.6
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 1.3e-59 233.8 215 54.4
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 2.2e-59 233.0 215 54.9
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 5.0e-59 231.9 231 52.4
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 5.0e-59 231.9 231 51.9
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 1.5e-58 230.3 239 48.5
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 2.5e-58 229.6 190 57.9
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 3.2e-58 229.2 174 63.2
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 3.2e-58 229.2 174 63.2
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 9.4e-58 227.6 233 48.9
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 3.0e-56 222.6 214 54.7
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 1.3e-54 217.2 205 55.1
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 1.7e-54 216.9 163 62.6
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.2e-54 216.5 163 62.6
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.2e-54 216.5 163 62.6
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 2.8e-54 216.1 164 62.2
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 4.8e-54 215.3 163 62.0
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 3.1e-53 212.6 222 53.2
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.2e-52 210.7 222 52.7
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 2.6e-52 209.5 164 56.7
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 9.4e-50 201.1 227 48.0
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.6e-49 200.3 188 54.8
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 2.7e-49 199.5 176 55.7
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 4.7e-49 198.7 143 63.6
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 4.0e-48 195.7 160 58.1
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 2.2e-46 189.9 124 67.7
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.7e-43 180.3 151 53.6
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 2.3e-35 153.3 222 42.8
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 1.2e-33 147.5 121 54.5
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 5.2e-32 142.1 84 66.7
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 9.8e-31 137.9 137 48.9
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.7e-30 137.1 118 53.4
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 1.0e-27 127.9 79 60.8
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.9e-21 107.1 82 58.5
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 4.0e-16 89.4 163 37.4
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 1.1e-10 71.2 105 41.9


User provided reference genes

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