Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003470g0080 Nicotiana tabacum HOM05D006347 ORTHO05D007835 9.2e-265 916.4 478 100.0
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 6.7e-215 750.7 498 82.9
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 1.2e-187 660.2 509 72.1
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 2.6e-187 659.1 545 68.4
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 4.7e-184 648.3 509 71.9
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 5.4e-180 634.8 500 71.0
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 9.1e-180 634.0 571 64.4
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 2.8e-136 489.6 513 55.0
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 4.6e-123 445.7 529 50.3
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 1.5e-121 440.7 507 50.1
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 2.8e-120 436.4 497 50.3
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 1.8e-119 433.7 525 49.5
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 9.9e-118 427.9 453 53.0
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 4.9e-117 425.6 456 52.6
Hma1.2p1_0884F.1_g232440 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 4.9e-117 425.6 449 53.0
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 6.4e-117 425.2 476 52.3
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 5.5e-116 422.2 521 49.3
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 1.6e-115 420.6 514 48.8
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 3.0e-114 416.4 497 48.9
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 8.7e-114 414.8 457 52.3
TWI31G1233 Tripterygium wilfordii HOM05D006347 ORTHO05D007835 8.7e-114 414.8 436 52.5
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 1.9e-113 413.7 463 51.4
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 1.9e-113 413.7 502 49.6
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 2.5e-113 413.3 531 47.6
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 7.4e-113 411.8 518 48.3
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 9.6e-113 411.4 489 48.5
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 1.3e-112 411.0 460 50.9
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 2.1e-112 410.2 507 48.1
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 6.2e-112 408.7 496 49.6
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 1.8e-111 407.1 533 46.5
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 1.8e-111 407.1 514 47.9
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.4e-111 406.8 446 52.9
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 2.4e-111 406.8 468 50.4
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.0e-111 406.0 446 53.4
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 9.0e-111 404.8 434 52.1
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 1.2e-110 404.4 452 50.7
arahy.Tifrunner.gnm1.ann1.9T0HEQ Arachis hypogaea HOM05D006347 ORTHO05D007835 2.6e-110 403.3 496 47.4
vmacro03233 Vaccinium macrocarpon HOM05D006347 ORTHO05D007835 2.6e-110 403.3 589 44.5
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 3.4e-110 402.9 465 50.8
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 7.6e-110 401.7 459 51.4
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 7.6e-110 401.7 450 50.0
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 1.3e-109 401.0 500 47.6
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 2.2e-109 400.2 491 47.3
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 4.9e-109 399.1 497 48.3
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 4.9e-109 399.1 477 49.1
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 8.4e-109 398.3 514 46.1
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 1.4e-108 397.5 469 49.7
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 2.5e-108 396.7 446 52.0
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 3.2e-108 396.4 456 49.6
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 3.2e-108 396.4 470 49.4
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 4.2e-108 396.0 461 49.9
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 9.3e-108 394.8 514 46.5
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 2.1e-107 393.7 462 48.5
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 2.1e-107 393.7 451 50.8
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 3.9e-106 389.4 525 46.1
Peaxi162Scf00755g00310 Petunia axillaris HOM05D006347 ORTHO05D007835 4.3e-105 386.0 480 54.0
Rhsim13G0103600 Rhododendron simsii HOM05D006347 ORTHO05D007835 3.7e-104 382.9 391 56.0
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 1.8e-103 380.6 490 46.9
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 2.4e-103 380.2 479 48.0
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 1.7e-101 374.0 430 49.3
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 3.8e-101 372.9 449 46.8
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 1.1e-100 371.3 468 47.0
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.4e-100 370.9 466 47.0
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 7.2e-100 368.6 490 45.7
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 2.7e-99 366.7 462 48.9
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 6.1e-99 365.5 442 48.0
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 6.1e-99 365.5 442 48.0
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 6.1e-99 365.5 340 56.2
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 5.1e-98 362.5 455 46.8
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 8.7e-98 361.7 507 43.4
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 4.8e-96 355.9 421 48.5
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.1e-95 354.8 521 42.8
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 9.0e-95 351.7 475 46.5
ClCG02G021770 Citrullus lanatus HOM05D006347 ORTHO05D007835 1.0e-93 348.2 444 48.0
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.3e-93 347.8 518 43.6
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 2.2e-93 347.1 527 42.1
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 1.1e-92 344.7 435 46.0
TAR633G1474 Trochodendron aralioides HOM05D006347 ORTHO05D007835 1.1e-92 344.7 350 55.4
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 4.2e-92 342.8 492 42.3
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.6e-91 340.9 440 45.9
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.4e-90 337.8 492 42.5
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 2.3e-90 337.0 485 43.7
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 3.0e-90 336.7 478 44.8
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 6.7e-90 335.5 486 42.6
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 3.3e-89 333.2 485 43.3
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 4.8e-88 329.3 488 42.8
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 4.8e-88 329.3 346 52.9
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 1.1e-87 328.2 520 40.2
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 1.8e-87 327.4 474 41.8
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 6.5e-85 318.9 519 41.0
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 9.7e-81 305.1 456 43.6
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 4.1e-79 299.7 500 38.4
Ah.01g016170 Amaranthus hybridus HOM05D006347 ORTHO05D007835 7.7e-78 295.4 383 47.3
Haze_23492 Corylus avellana HOM05D006347 ORTHO05D007835 7.2e-76 288.9 441 43.3
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 7.2e-76 288.9 444 40.3
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 2.9e-69 266.9 452 39.2
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.5e-68 264.6 455 38.7
Glyma.12G180067 Glycine max HOM05D006347 ORTHO05D007835 1.1e-60 238.4 198 62.6
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.1e-60 238.4 495 34.5
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 3.6e-59 233.4 431 38.1
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 8.0e-59 232.3 357 40.3
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 2.3e-58 230.7 347 39.5
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 4.4e-49 199.9 328 41.8
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 2.9e-48 197.2 333 37.5
Haze_23495 Corylus avellana HOM05D006347 ORTHO05D007835 1.2e-43 181.8 244 45.1
Cpa.g.sc47.36 Carica papaya HOM05D006347 ORTHO05D007835 3.4e-41 173.7 206 48.1
Ah.01g016190 Amaranthus hybridus HOM05D006347 ORTHO05D007835 1.0e-37 162.2 224 45.5
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.4e-33 146.7 172 47.1
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 2.1e-30 137.9 209 43.1
SMO265G0001 Selaginella moellendorffii HOM05D006347 ORTHO05D007835 2.1e-30 137.9 254 36.6
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 9.9e-25 119.0 193 38.3
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 3.9e-21 107.1 156 43.6
Hund07723 Selenicereus undatus HOM05D006347 ORTHO05D007835 5.4e-15 86.7 159 39.0
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 5.6e-12 76.6 97 43.3
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 5.6e-12 76.6 61 55.7
SEGI_35353 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 2.1e-11 74.7 70 52.9
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 2.6e-09 67.8 460 22.6
SEGI_37044 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 4.5e-09 67.0 87 44.8
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 6.4e-08 63.2 86 41.9
Actinidia14339 Actinidia chinensis HOM05D006347 ORTHO05D007835 8.4e-08 62.8 37 75.7
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 1.4e-07 62.0 84 41.7
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 3.2e-07 60.8 84 40.5
CSS0039987 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 6.0e-06 56.6 52 57.7


User provided reference genes

Program Settings