Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 0.0e+00 1321.6 684 100.0
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 2.0e-276 955.7 677 77.8
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 1.2e-260 903.3 707 70.4
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 9.5e-255 883.6 642 73.1
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.1e-197 694.1 697 55.2
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 9.6e-191 671.0 684 54.1
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 1.5e-188 663.7 664 55.9
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 1.6e-185 653.7 713 50.5
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 1.5e-183 647.1 700 53.6
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 4.8e-182 642.1 716 52.0
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 7.7e-180 634.8 676 53.0
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 1.4e-178 630.6 621 56.5
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 3.6e-177 625.9 624 55.3
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 4.6e-177 625.5 676 51.0
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 7.9e-177 624.8 717 50.3
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 3.7e-174 615.9 728 49.9
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 2.6e-172 609.8 615 60.2
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 5.0e-171 605.5 621 54.6
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 3.6e-169 599.4 731 48.4
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 6.1e-169 598.6 725 49.8
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 6.7e-168 595.1 655 51.0
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 7.4e-167 591.7 730 47.8
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 1.4e-165 587.4 679 49.0
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 1.7e-163 580.5 668 47.9
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 5.5e-162 575.5 627 57.3
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.6e-161 573.9 647 48.4
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 1.0e-160 571.2 679 48.7
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 1.4e-160 570.9 705 48.7
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 5.3e-157 558.9 666 48.0
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 3.5e-156 556.2 667 48.9
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 1.7e-155 553.9 754 45.2
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 2.9e-155 553.1 705 47.2
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 2.5e-154 550.1 637 49.3
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 2.5e-154 550.1 606 49.7
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 9.4e-154 548.1 671 48.6
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 4.7e-153 545.8 606 50.2
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 3.0e-152 543.1 534 55.4
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 4.0e-152 542.7 619 49.9
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 8.8e-152 541.6 695 47.6
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 1.4e-149 534.3 689 46.9
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 2.4e-149 533.5 613 49.9
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 3.2e-146 523.1 617 49.6
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 3.2e-146 523.1 449 66.4
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 1.0e-144 518.1 608 50.0
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 2.3e-144 516.9 689 45.9
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 4.0e-144 516.2 576 48.8
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 5.7e-143 512.3 522 52.5
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 5.7e-143 512.3 692 43.2
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 9.8e-143 511.5 696 46.7
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 4.9e-142 509.2 683 42.9
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 1.7e-139 500.7 650 46.2
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 2.9e-139 500.0 543 51.2
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 2.9e-139 500.0 650 44.8
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 9.5e-138 495.0 443 56.2
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 2.1e-137 493.8 525 52.4
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 3.6e-137 493.0 665 44.5
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 1.4e-136 491.1 615 46.3
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 1.3e-134 484.6 514 51.2
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 2.4e-133 480.3 672 42.0
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 1.6e-132 477.6 625 44.3
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 8.6e-131 471.9 490 49.2
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 1.6e-129 467.6 616 45.0
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 4.7e-129 466.1 453 53.2
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 1.7e-126 457.6 512 49.0
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 1.7e-126 457.6 630 45.9
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 1.2e-124 451.4 480 49.4
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 3.5e-124 449.9 536 46.3
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 1.7e-123 447.6 512 48.6
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 6.2e-121 439.1 748 40.5
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 2.3e-120 437.2 438 51.1
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 7.1e-117 425.6 470 50.6
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 2.3e-115 420.6 544 46.0
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 1.9e-114 417.5 591 42.5
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 7.3e-114 415.6 603 42.1
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 7.3e-114 415.6 613 41.8
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 1.2e-113 414.8 622 40.5
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 2.6e-111 407.1 432 51.4
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 9.9e-111 405.2 647 37.7
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 1.3e-110 404.8 589 40.7
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 1.4e-109 401.4 410 51.7
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 9.2e-109 398.7 586 41.0
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 9.2e-109 398.7 586 41.0
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 1.1e-106 391.7 612 39.7
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 8.9e-104 382.1 621 40.3
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 2.6e-103 380.6 610 39.2
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 2.2e-102 377.5 544 41.4
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 6.4e-102 375.9 644 38.0
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 1.1e-101 375.2 441 48.1
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 1.2e-100 371.7 562 41.8
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 3.1e-96 357.1 337 54.0
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 2.6e-95 354.0 312 55.8
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 7.1e-93 345.9 313 55.0
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 9.3e-93 345.5 616 35.7
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 1.6e-92 344.7 281 59.4
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 1.6e-92 344.7 650 35.5
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 3.0e-91 340.5 590 40.3
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 4.0e-88 330.1 388 50.0
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 6.4e-86 322.8 578 37.4
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 3.5e-76 290.4 489 38.7
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 6.7e-75 286.2 306 49.7
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.8e-51 208.4 391 40.7
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 4.7e-44 183.7 309 43.0
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 6.3e-41 173.3 239 49.0
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 1.6e-39 168.7 270 45.9
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 1.1e-32 146.0 176 50.6
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.7e-31 141.4 147 59.9
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.0e-30 139.4 144 60.4
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 3.2e-29 134.4 255 40.8
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 4.7e-28 130.6 275 26.2
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 8.0e-20 103.2 278 26.6
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 2.3e-19 101.7 108 54.6
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 6.8e-19 100.1 148 46.6
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.3e-13 80.1 64 57.8
Lalb_Chr10g0092301 Lupinus albus HOM05D002617 ORTHO05D009035 8.0e-12 76.6 65 52.3
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 1.0e-06 59.7 43 67.4


User provided reference genes

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