Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 0.0e+00 1075.1 536 100.0
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 2.0e-284 981.9 536 92.2
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 8.2e-254 880.2 533 83.7
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 3.7e-238 828.2 539 78.8
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 1.8e-237 825.9 536 78.5
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 3.0e-232 808.5 536 77.4
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 5.6e-170 601.7 546 59.7
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 4.2e-165 585.5 551 57.2
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.7e-164 582.8 549 57.7
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.7e-161 572.4 508 60.2
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 1.8e-160 570.1 549 56.5
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.4e-160 569.7 549 57.2
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 1.5e-159 567.0 527 56.9
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 1.4e-157 560.5 514 59.3
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 1.9e-154 550.1 491 59.1
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 4.8e-153 545.4 613 50.7
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 9.0e-152 541.2 552 54.3
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 1.5e-151 540.4 520 56.0
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 4.2e-149 532.3 443 62.3
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 1.2e-148 530.8 551 53.7
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 1.3e-147 527.3 502 57.8
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 1.9e-146 523.5 540 51.5
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 4.3e-146 522.3 555 53.2
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 9.7e-146 521.2 498 57.4
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.3e-145 520.8 532 54.5
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.1e-144 517.7 523 54.3
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.2e-143 514.2 541 53.2
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 4.2e-141 505.8 554 52.9
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 7.2e-141 505.0 562 51.8
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 7.2e-141 505.0 487 55.0
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 2.3e-139 500.0 690 44.5
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 6.7e-139 498.4 534 52.4
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 2.0e-138 496.9 516 53.9
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 5.7e-138 495.4 550 52.4
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 7.4e-138 495.0 515 53.6
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 1.3e-137 494.2 569 52.0
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.3e-137 494.2 550 51.3
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 1.7e-137 493.8 522 53.8
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 3.7e-137 492.7 558 52.0
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 3.7e-137 492.7 576 50.5
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 3.1e-136 489.6 464 56.0
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 4.1e-136 489.2 481 55.1
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 9.1e-136 488.0 406 62.3
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 8.5e-134 481.5 650 46.8
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.6e-132 476.1 554 50.4
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.0e-131 474.6 544 50.4
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 8.8e-131 471.5 522 51.1
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 2.6e-130 469.9 441 56.0
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 7.4e-130 468.4 522 50.4
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 9.7e-130 468.0 538 50.9
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.7e-129 467.2 539 49.5
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 3.7e-129 466.1 540 50.4
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 7.0e-128 461.8 494 52.8
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 9.1e-128 461.5 551 48.8
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 1.6e-127 460.7 544 48.3
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.5e-125 454.1 558 48.7
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 5.5e-125 452.2 551 48.3
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 7.2e-125 451.8 525 49.9
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 9.4e-125 451.4 558 48.7
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.2e-124 451.1 445 56.2
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.6e-124 450.7 559 50.3
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 1.4e-123 447.6 398 60.6
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 8.8e-123 444.9 547 49.0
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 1.2e-122 444.5 539 50.1
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 2.0e-122 443.7 470 53.8
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 7.5e-122 441.8 560 49.1
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 9.1e-120 434.9 531 46.9
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 1.3e-118 431.0 499 51.9
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 9.4e-117 424.9 545 47.3
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 2.1e-116 423.7 547 46.6
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 4.0e-115 419.5 515 48.9
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 2.6e-114 416.8 519 48.9
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 4.4e-114 416.0 496 49.8
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 2.8e-113 413.3 501 47.1
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 3.1e-112 409.8 442 54.1
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 2.7e-111 406.8 461 51.0
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 3.5e-111 406.4 422 52.6
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 1.3e-110 404.4 523 46.5
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 4.2e-109 399.4 516 47.7
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.4e-107 394.4 402 51.5
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 2.6e-106 390.2 413 52.5
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 4.4e-106 389.4 413 50.6
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 4.4e-106 389.4 441 50.1
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 8.3e-105 385.2 551 45.2
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 1.4e-104 384.4 534 44.8
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 5.4e-104 382.5 528 43.2
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 2.0e-103 380.6 448 49.1
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 2.3e-102 377.1 528 42.8
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 5.0e-102 375.9 513 45.2
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 9.5e-101 371.7 526 45.6
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 4.7e-100 369.4 432 49.3
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.4e-99 367.9 527 43.8
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 6.8e-99 365.5 441 47.2
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 9.8e-98 361.7 494 44.5
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 1.7e-97 360.9 476 45.2
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 4.9e-97 359.4 525 42.3
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.6e-95 354.4 495 44.8
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 2.0e-95 354.0 439 46.7
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 2.0e-95 354.0 439 46.7
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 7.8e-95 352.1 526 43.3
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 2.3e-94 350.5 493 43.4
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 3.9e-94 349.7 528 41.9
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 8.6e-94 348.6 448 44.4
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.6e-92 344.4 281 63.7
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.1e-91 341.7 419 46.1
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 2.3e-91 340.5 379 48.3
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 4.0e-91 339.7 412 49.3
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 5.2e-91 339.3 436 44.7
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 4.4e-90 336.3 442 45.5
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.7e-89 334.3 404 46.8
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 3.7e-89 333.2 406 47.3
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 1.1e-88 331.6 402 47.8
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 1.1e-88 331.6 496 44.6
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 1.4e-88 331.3 339 52.8
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 1.9e-88 330.9 466 43.6
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 6.6e-86 322.4 366 48.6
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 8.6e-86 322.0 366 51.4
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 2.5e-85 320.5 421 46.1
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 3.3e-85 320.1 474 41.6
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 4.3e-85 319.7 394 45.7
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 7.3e-85 318.9 473 41.9
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 7.3e-85 318.9 473 41.9
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.5e-82 311.2 353 52.7
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.0e-82 310.8 233 66.1
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 1.3e-81 308.1 406 45.6
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 4.1e-80 303.1 520 39.0
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 5.4e-80 302.8 469 40.1
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.7e-79 300.4 450 40.2
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 9.5e-77 292.0 390 44.4
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 7.6e-74 282.3 319 51.4
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 4.1e-72 276.6 177 79.1
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 3.5e-71 273.5 227 61.2
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.3e-69 266.5 359 46.0
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 3.6e-68 263.5 359 43.2
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 1.2e-63 248.4 190 65.3
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 9.6e-61 238.8 383 38.6
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 2.0e-58 231.1 273 46.2
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 6.7e-54 216.1 586 31.4
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 1.5e-53 214.9 210 54.3
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 3.9e-46 190.3 269 42.4
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 6.2e-44 183.0 413 33.9
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 5.3e-43 179.9 274 41.2
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 3.0e-38 164.1 407 30.5
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 1.1e-37 162.2 201 49.3
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 1.1e-29 135.6 218 40.4
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 1.8e-27 128.3 204 36.8
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.7e-25 121.7 401 29.2
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.4e-24 118.6 243 33.3
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.9e-17 94.4 221 33.9
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 4.1e-11 73.9 54 64.8
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.3e-09 68.9 41 70.7
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 3.6e-07 60.8 95 36.8


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