Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 4.4e-69 264.6 146 100.0
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 8.4e-68 260.4 146 98.6
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 7.3e-64 247.3 146 92.5
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.1e-62 241.9 146 91.1
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.0e-61 239.2 146 90.4
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 9.9e-61 236.9 146 89.7
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 1.8e-49 199.5 145 73.8
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.8e-49 199.5 145 74.5
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.3e-49 199.1 145 72.4
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.5e-48 196.4 145 73.8
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 7.4e-48 194.1 145 73.1
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.8e-47 192.2 144 72.2
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 6.2e-47 191.0 141 70.9
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 3.1e-46 188.7 145 70.3
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 4.0e-46 188.3 144 72.2
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 5.3e-46 188.0 144 68.8
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 9.0e-46 187.2 145 69.0
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 9.0e-46 187.2 145 67.6
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 1.5e-45 186.4 145 67.6
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.5e-45 186.4 140 70.7
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 1.5e-45 186.4 145 69.0
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 2.6e-45 185.7 144 68.1
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 3.4e-45 185.3 145 70.3
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 4.5e-45 184.9 142 69.7
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 4.5e-45 184.9 144 69.4
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 2.2e-44 182.6 142 67.6
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 6.5e-44 181.0 141 68.1
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 8.4e-44 180.6 132 71.2
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 1.9e-43 179.5 145 67.6
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.9e-43 179.5 145 65.5
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 1.9e-43 179.5 145 65.5
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.5e-43 179.1 144 68.1
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 2.5e-43 179.1 132 71.2
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 4.2e-43 178.3 127 73.2
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 5.5e-43 177.9 145 64.1
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 7.1e-43 177.6 144 64.6
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 7.1e-43 177.6 132 71.2
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 9.3e-43 177.2 140 65.7
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.2e-42 176.8 140 68.6
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 1.2e-42 176.8 145 64.8
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 1.6e-42 176.4 135 69.6
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 2.7e-42 175.6 145 64.1
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 4.6e-42 174.9 133 70.7
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.3e-41 173.3 126 71.4
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.8e-41 172.9 144 66.0
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.8e-41 172.9 142 66.9
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 2.3e-41 172.6 129 69.8
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 3.9e-41 171.8 138 65.9
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 3.9e-41 171.8 145 65.5
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 5.1e-41 171.4 126 72.2
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 5.1e-41 171.4 141 66.7
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 8.7e-41 170.6 140 65.7
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.9e-40 169.5 121 74.4
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 2.5e-40 169.1 109 81.7
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 2.5e-40 169.1 134 68.7
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 4.3e-40 168.3 143 64.3
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 4.3e-40 168.3 126 70.6
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 5.7e-40 167.9 121 74.4
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 7.4e-40 167.5 126 72.2
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 7.4e-40 167.5 140 67.1
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 7.4e-40 167.5 144 61.1
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 9.7e-40 167.2 146 63.7
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.3e-39 166.8 144 61.8
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.6e-39 166.4 113 77.0
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 2.8e-39 165.6 126 71.4
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 3.7e-39 165.2 145 62.1
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 3.7e-39 165.2 145 62.1
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 6.3e-39 164.5 125 69.6
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.1e-38 163.7 144 62.5
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 1.4e-38 163.3 135 65.9
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.8e-38 162.9 141 62.4
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.8e-38 162.9 140 63.6
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 5.3e-38 161.4 141 61.7
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 5.3e-38 161.4 141 61.7
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 6.9e-38 161.0 145 60.0
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 1.5e-37 159.8 137 63.5
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 2.6e-37 159.1 121 71.9
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 3.4e-37 158.7 145 57.9
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 5.9e-37 157.9 144 57.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.7e-36 156.4 125 64.8
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.9e-36 155.6 146 58.2
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 5.0e-36 154.8 145 57.9
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 6.5e-36 154.5 130 61.5
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 8.5e-36 154.1 140 58.6
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 8.5e-36 154.1 140 58.6
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 8.5e-36 154.1 140 57.9
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 8.5e-36 154.1 140 58.6
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 8.5e-36 154.1 124 62.9
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 8.5e-36 154.1 142 58.5
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.4e-35 153.3 133 58.6
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.4e-35 153.3 133 58.6
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 1.4e-35 153.3 131 63.4
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.4e-35 153.3 140 58.6
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 1.4e-35 153.3 130 63.8
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 4.2e-35 151.8 130 61.5
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 1.2e-34 150.2 207 45.9
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.2e-34 150.2 163 54.0
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.7e-34 149.1 126 62.7
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 6.1e-34 147.9 124 62.1
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.4e-33 146.7 172 51.2
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 1.4e-33 146.7 130 60.0
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 8.8e-33 144.1 125 61.6
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.5e-32 143.3 124 61.3
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 1.9e-32 142.9 145 56.6
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 2.5e-32 142.5 144 55.6
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 2.8e-31 139.0 130 58.5
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 6.3e-31 137.9 127 56.7
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 2.4e-30 136.0 145 54.5
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 4.1e-30 135.2 120 58.3
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 9.1e-30 134.0 111 64.0
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 4.5e-29 131.7 113 62.8
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 1.7e-28 129.8 130 54.6
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.1e-27 127.1 107 61.7
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 1.2e-26 123.6 303 34.0
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 7.9e-26 120.9 145 53.1
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.4e-25 120.2 109 58.7
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.7e-20 103.2 70 78.6
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 1.9e-19 99.8 159 40.9
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.8e-17 93.2 95 53.7
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 2.6e-16 89.4 68 67.6
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.8e-15 85.9 140 43.6
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 4.1e-14 82.0 125 42.4
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 4.1e-14 82.0 125 42.4
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 1.2e-10 70.5 69 55.1
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.4e-06 57.0 54 53.7
Hma1.2p1_0871F.1_g231040 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 9.1e-06 54.3 52 53.8


User provided reference genes

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