Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003450g0030 Nicotiana tabacum HOM05D005193 ORTHO05D006316 2.5e-201 705.3 373 100.0
Sopen12g001090 Solanum pennellii HOM05D005193 ORTHO05D006316 1.3e-149 533.5 412 72.3
GSVIVG01037690001 Vitis vinifera HOM05D005193 ORTHO05D006316 2.2e-96 356.7 408 50.2
QL08p009116 Quercus lobata HOM05D005193 ORTHO05D006316 2.1e-94 350.1 406 48.3
Gohir.D01G069100 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.0e-93 347.8 405 49.1
Dinv40781 Davidia involucrata HOM05D005193 ORTHO05D006316 1.3e-93 347.4 370 51.6
Thecc.07G032100 Theobroma cacao HOM05D005193 ORTHO05D006316 3.9e-93 345.9 405 48.4
Duzib268G1225 Durio zibethinus HOM05D005193 ORTHO05D006316 6.6e-93 345.1 405 47.9
Gohir.A01G082500 Gossypium hirsutum HOM05D005193 ORTHO05D006316 6.6e-93 345.1 405 48.9
Gorai.002G091400 Gossypium raimondii HOM05D005193 ORTHO05D006316 3.3e-92 342.8 404 49.0
CiPaw.11G192300 Carya illinoinensis HOM05D005193 ORTHO05D006316 4.3e-92 342.4 404 47.5
RhsimUnG0248800 Rhododendron simsii HOM05D005193 ORTHO05D006316 4.7e-91 339.0 406 47.8
Actinidia10743 Actinidia chinensis HOM05D005193 ORTHO05D006316 8.1e-91 338.2 406 47.8
TWI38G1184 Tripterygium wilfordii HOM05D005193 ORTHO05D006316 5.2e-90 335.5 408 45.6
Manes.15G068700 Manihot esculenta HOM05D005193 ORTHO05D006316 1.5e-89 334.0 410 46.8
Sabra16G0234700 Salix brachista HOM05D005193 ORTHO05D006316 2.6e-89 333.2 408 46.6
Hma1.2p1_0036F.1_g023390 Hydrangea macrophylla HOM05D005193 ORTHO05D006316 1.7e-88 330.5 416 46.2
Ciclev10007388m.g Citrus clementina HOM05D005193 ORTHO05D006316 2.2e-88 330.1 406 47.0
Potri.001G356700 Populus trichocarpa HOM05D005193 ORTHO05D006316 2.2e-88 330.1 408 46.6
Haze_09711 Corylus avellana HOM05D005193 ORTHO05D006316 2.1e-86 323.6 470 41.5
Nn1g03454 Nelumbo nucifera HOM05D005193 ORTHO05D006316 6.0e-86 322.0 403 46.7
Cc05_g14020 Coffea canephora HOM05D005193 ORTHO05D006316 7.8e-86 321.6 410 47.1
Peaxi162Scf00660g00118 Petunia axillaris HOM05D005193 ORTHO05D006316 1.0e-85 321.2 222 78.8
Atru.chr2.3490 Acer truncatum HOM05D005193 ORTHO05D006316 1.3e-85 320.9 406 47.3
Lsat_1_v5_gn_7_111080 Lactuca sativa HOM05D005193 ORTHO05D006316 3.9e-85 319.3 410 43.9
COL.COLO4_09693 Corchorus olitorius HOM05D005193 ORTHO05D006316 8.7e-85 318.2 438 44.5
MD03G1197400 Malus domestica HOM05D005193 ORTHO05D006316 8.7e-85 318.2 406 45.3
HanXRQChr11g0335911 Helianthus annuus HOM05D005193 ORTHO05D006316 7.3e-84 315.1 409 44.0
Nitab4.5_0000168g0230 Nicotiana tabacum HOM05D005193 ORTHO05D006316 2.1e-83 313.5 233 75.5
MSTRG.6941 Avicennia marina HOM05D005193 ORTHO05D006316 8.1e-83 311.6 419 43.9
CANSAT11G2467 Cannabis sativa HOM05D005193 ORTHO05D006316 1.4e-82 310.8 390 46.7
TAR627G0707 Trochodendron aralioides HOM05D005193 ORTHO05D006316 1.8e-82 310.5 368 47.8
RcHm_v2.0_Chr5g0040821 Rosa chinensis HOM05D005193 ORTHO05D006316 1.5e-81 307.4 404 43.6
Aqoxy4G01697 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 4.4e-81 305.8 405 43.5
ECA236G2682 Erigeron canadensis HOM05D005193 ORTHO05D006316 1.3e-80 304.3 404 43.3
MBI07_g09089_MAGBIO Magnolia biondii HOM05D005193 ORTHO05D006316 6.4e-80 302.0 415 42.4
Aqoxy1G03394 Aquilegia oxysepala HOM05D005193 ORTHO05D006316 8.4e-80 301.6 410 43.2
LjContig00272g0004657 Lotus japonicus HOM05D005193 ORTHO05D006316 1.9e-79 300.4 406 43.1
PSO210G7537 Papaver somniferum HOM05D005193 ORTHO05D006316 7.1e-79 298.5 402 43.0
FAN11G0281 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.2e-78 297.7 406 43.6
PSO832G1529 Papaver somniferum HOM05D005193 ORTHO05D006316 1.2e-78 297.7 407 42.0
FAN21G2135 Fragaria x ananassa HOM05D005193 ORTHO05D006316 1.6e-78 297.4 406 43.1
MELO3C013149.2 Cucumis melo HOM05D005193 ORTHO05D006316 2.1e-78 297.0 413 43.6
Sed0015549 Sechium edule HOM05D005193 ORTHO05D006316 2.1e-78 297.0 379 45.4
AT1G50730 Arabidopsis thaliana HOM05D005193 ORTHO05D006316 4.6e-78 295.8 408 42.4
Eucgr.F03483 Eucalyptus grandis HOM05D005193 ORTHO05D006316 4.6e-78 295.8 408 44.4
A06p02890 Brassica napus HOM05D005193 ORTHO05D006316 1.0e-77 294.7 401 42.1
Carub.0001s3976 Capsella rubella HOM05D005193 ORTHO05D006316 1.0e-77 294.7 404 42.3
CsaV3_7G021980 Cucumis sativus L. HOM05D005193 ORTHO05D006316 1.0e-77 294.7 413 43.1
Glyma.14G021300 Glycine max HOM05D005193 ORTHO05D006316 1.3e-77 294.3 405 42.5
Ca_11685_v3 Cicer arietinum L. HOM05D005193 ORTHO05D006316 5.1e-77 292.4 408 41.7
PGR031G1204 Punica granatum HOM05D005193 ORTHO05D006316 5.1e-77 292.4 401 44.1
Sp1g37570 Schrenkiella parvula HOM05D005193 ORTHO05D006316 5.1e-77 292.4 404 41.6
BcaC08g43253 Brassica carinata HOM05D005193 ORTHO05D006316 1.1e-76 291.2 406 41.6
Psat6g078440 Pisum sativum HOM05D005193 ORTHO05D006316 3.3e-76 289.7 408 42.2
VMungo0647G2043 Vigna mungo HOM05D005193 ORTHO05D006316 5.6e-76 288.9 408 40.9
arahy.Tifrunner.gnm1.ann1.J5TE7C Arachis hypogaea HOM05D005193 ORTHO05D006316 1.3e-75 287.7 408 40.4
BcaB07g33512 Brassica carinata HOM05D005193 ORTHO05D006316 2.8e-75 286.6 388 41.8
C06p05990 Brassica napus HOM05D005193 ORTHO05D006316 2.8e-75 286.6 393 42.2
BolC6t35712H Brassica oleracea HOM05D005193 ORTHO05D006316 2.8e-75 286.6 393 42.2
Phvul.008G270200 Phaseolus vulgaris HOM05D005193 ORTHO05D006316 4.8e-75 285.8 408 40.7
arahy.Tifrunner.gnm1.ann1.K04HM7 Arachis hypogaea HOM05D005193 ORTHO05D006316 6.2e-75 285.4 408 40.2
BraA06t23495Z Brassica rapa HOM05D005193 ORTHO05D006316 1.1e-74 284.6 403 41.2
Thhalv10011218m.g Eutrema salsugineum HOM05D005193 ORTHO05D006316 1.4e-74 284.3 407 41.0
FAN25G0346 Fragaria x ananassa HOM05D005193 ORTHO05D006316 2.4e-74 283.5 382 44.2
Migut.M01736 Erythranthe guttata HOM05D005193 ORTHO05D006316 6.9e-74 282.0 391 42.2
THA.LOC104816145 Tarenaya hassleriana HOM05D005193 ORTHO05D006316 1.5e-73 280.8 404 41.8
TPR.G2822 Trifolium pratense HOM05D005193 ORTHO05D006316 3.4e-73 279.6 408 41.2
Medtr1g056460 Medicago truncatula HOM05D005193 ORTHO05D006316 4.5e-73 279.3 408 42.4
Prupe.4G218100 Prunus persica HOM05D005193 ORTHO05D006316 1.7e-72 277.3 350 45.1
FAN16G1885 Fragaria x ananassa HOM05D005193 ORTHO05D006316 7.1e-71 271.9 370 44.1
FAN25G2894 Fragaria x ananassa HOM05D005193 ORTHO05D006316 7.1e-71 271.9 373 44.2
Lalb_Chr17g0348631 Lupinus albus HOM05D005193 ORTHO05D006316 1.2e-70 271.2 388 41.2
Aa31LG10G3620 Aethionema arabicum HOM05D005193 ORTHO05D006316 2.8e-67 260.0 404 39.1
Solyc12g005090.3 Solanum lycopersicum HOM05D005193 ORTHO05D006316 5.3e-66 255.8 207 69.6
Oeu041839.1 Olea europaea HOM05D005193 ORTHO05D006316 2.6e-65 253.4 322 46.6
AUR62015820 Chenopodium quinoa HOM05D005193 ORTHO05D006316 3.8e-64 249.6 411 39.9
CARHR040830 Cardamine hirsuta HOM05D005193 ORTHO05D006316 1.6e-62 244.2 339 41.9
Ah.06g182590 Amaranthus hybridus HOM05D005193 ORTHO05D006316 2.1e-62 243.8 407 39.3
CAN.G1219.3 Capsicum annuum HOM05D005193 ORTHO05D006316 1.4e-58 231.1 184 67.9
Cpa.g.sc12.274 Carica papaya HOM05D005193 ORTHO05D006316 4.0e-58 229.6 256 50.4
AUR62020399 Chenopodium quinoa HOM05D005193 ORTHO05D006316 3.8e-56 223.0 373 39.4
Peaxi162Scf00660g00119 Petunia axillaris HOM05D005193 ORTHO05D006316 4.6e-54 216.1 149 75.8
ClCG09G010950 Citrullus lanatus HOM05D005193 ORTHO05D006316 1.0e-53 214.9 388 37.6
arahy.Tifrunner.gnm1.ann1.89LBMG Arachis hypogaea HOM05D005193 ORTHO05D006316 4.3e-52 209.5 256 45.3
FvH4_3g23170 Fragaria vesca HOM05D005193 ORTHO05D006316 1.2e-49 201.4 233 48.9
HPP92_008858 Vanilla planifolia HOM05D005193 ORTHO05D006316 4.2e-47 193.0 401 34.2
CDE02G0254 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.2e-46 191.4 283 42.4
Mapoly0038s0063 Marchantia polymorpha HOM05D005193 ORTHO05D006316 8.8e-45 185.3 420 32.4
Pp3c16_8580 Physcomitrium patens HOM05D005193 ORTHO05D006316 1.9e-44 184.1 413 29.5
SalBow8G4471 Salvia bowleyana HOM05D005193 ORTHO05D006316 1.7e-43 181.0 427 31.1
SMO115G0237 Selaginella moellendorffii HOM05D005193 ORTHO05D006316 2.1e-38 164.1 371 32.3
Hund02018 Selenicereus undatus HOM05D005193 ORTHO05D006316 1.2e-30 138.3 166 42.8
CBR_g49709 Chara braunii HOM05D005193 ORTHO05D000048 6.3e-27 125.9 428 26.6
Lj1C877G15 Lonicera japonica HOM05D005193 ORTHO05D006316 1.3e-24 118.2 156 44.9
ATR0585G123 Amborella trichopoda HOM05D005193 ORTHO05D006316 2.1e-22 110.9 159 39.6
Gorai.011G223800 Gossypium raimondii HOM05D005193 ORTHO05D006316 8.0e-22 109.0 124 47.6
CSS0039097 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 1.1e-18 98.6 92 53.3
CSS0028155 Camellia sinensis var. sinensis HOM05D005193 ORTHO05D006316 2.4e-18 97.4 90 53.3
arahy.Tifrunner.gnm1.ann1.BLY3DW Arachis hypogaea HOM05D005193 ORTHO05D006316 1.5e-15 88.2 96 44.8
ATR0585G071 Amborella trichopoda HOM05D005193 ORTHO05D006316 3.2e-15 87.0 131 37.4
Aqoxy4G00029 Aquilegia oxysepala HOM05D002071 ORTHO05D002109 5.5e-15 86.3 96 43.8
Oeu041837.1 Olea europaea HOM05D005193 ORTHO05D006316 9.4e-15 85.5 92 50.0
Cpa.g.sc12.275 Carica papaya HOM05D005193 ORTHO05D006316 6.8e-13 79.3 84 47.6
SalBow8G0199 Salvia bowleyana HOM05D005193 ORTHO05D006316 6.8e-13 79.3 97 44.3
Gohir.D10G199632 Gossypium hirsutum HOM05D005193 ORTHO05D006316 9.8e-12 75.5 95 43.2
CDE02G4589 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 1.7e-11 74.7 216 29.6
Gohir.D08G017066 Gossypium hirsutum HOM05D005193 ORTHO05D006316 1.6e-09 68.2 66 48.5
Gorai.001G274400 Gossypium raimondii HOM05D005193 ORTHO05D006316 2.0e-09 67.8 66 47.0
SEGI_26698 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 2.0e-09 67.8 93 37.6
SEGI_35263 Sequoiadendron giganteum HOM05D005193 ORTHO05D006316 1.7e-08 64.7 60 50.0
AUR62015822 Chenopodium quinoa HOM05D005193 ORTHO05D006316 1.1e-07 62.0 71 47.9
CDE02G0065 Ceratophyllum demersum HOM05D005193 ORTHO05D006316 4.7e-06 56.6 77 42.9


User provided reference genes

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