Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003448g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 1.4e-60 236.5 154 100.0
Nitab4.5_0008487g0020 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.2e-58 229.2 153 96.7
Nitab4.5_0006894g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 4.6e-56 221.5 154 89.0
Nitab4.5_0000146g0130 Nicotiana tabacum HOM05D007813 ORTHO05D009861 4.6e-48 194.9 152 82.9
Nitab4.5_0004221g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 9.5e-46 187.2 114 86.0
Nitab4.5_0001077g0010 Nicotiana tabacum HOM05D007813 ORTHO05D009861 7.1e-41 171.0 154 75.3
Peaxi162Scf00643g00047 Petunia axillaris HOM05D007813 ORTHO05D009861 4.1e-33 145.2 133 62.4
Sopen01g035700 Solanum pennellii HOM05D007813 ORTHO05D009861 2.3e-31 139.4 147 68.7
PGSC0003DMG400031169 Solanum tuberosum HOM05D007813 ORTHO05D009861 8.6e-31 137.5 124 76.6
MSTRG.2075 Avicennia marina HOM05D007813 ORTHO05D009861 1.5e-22 110.2 147 47.6
Solyc01g089857.1 Solanum lycopersicum HOM05D007813 ORTHO05D009861 1.6e-21 106.7 87 70.1
Cc11_g01070 Coffea canephora HOM05D007813 ORTHO05D009861 5.3e-20 101.7 157 51.0
Lj9P278T15 Lonicera japonica HOM05D007813 ORTHO05D009861 9.0e-20 100.9 132 45.5
DCAR_023485 Daucus carota HOM05D007813 ORTHO05D009861 5.8e-19 98.2 130 45.4
Migut.E00672 Erythranthe guttata HOM05D007813 ORTHO05D009861 7.6e-19 97.8 130 54.6
Actinidia04359 Actinidia chinensis HOM05D007813 ORTHO05D009861 3.8e-18 95.5 157 42.0
Aa31LG4G9500 Aethionema arabicum HOM05D007813 ORTHO05D009861 3.8e-18 95.5 128 46.1
CARHR231780 Cardamine hirsuta HOM05D007813 ORTHO05D009861 1.4e-17 93.6 129 46.5
RhsimUnG0102800 Rhododendron simsii HOM05D007813 ORTHO05D009861 1.9e-17 93.2 137 45.3
Carub.0007s1668 Capsella rubella HOM05D007813 ORTHO05D009861 5.4e-17 91.7 135 44.4
Nitab4.5_0003697g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 7.1e-17 91.3 64 89.1
AT4G24370 Arabidopsis thaliana HOM05D007813 ORTHO05D009861 1.2e-16 90.5 140 41.4
Sc06g0009980 Simmondsia chinensis HOM05D007813 ORTHO05D009861 1.6e-16 90.1 147 42.9
Dinv01363 Davidia involucrata HOM05D007813 ORTHO05D009861 3.5e-16 89.0 124 44.4
Oeu039115.1 Olea europaea HOM05D007813 ORTHO05D009861 4.6e-16 88.6 146 43.8
Hund21950 Selenicereus undatus HOM05D007813 ORTHO05D009861 4.6e-16 88.6 153 40.5
SGA_v2.0_scaffold5G02767 Striga asiatica HOM05D007813 ORTHO05D009861 6.0e-16 88.2 139 49.6
Thhalv10026382m.g Eutrema salsugineum HOM05D007813 ORTHO05D009861 7.9e-16 87.8 133 44.4
ClCG01G008030 Citrullus lanatus HOM05D007813 ORTHO05D009861 1.3e-15 87.0 142 43.0
A01p15750 Brassica napus HOM05D007813 ORTHO05D009861 1.7e-15 86.7 133 45.1
Nitab4.5_0007508g0030 Nicotiana tabacum HOM05D007813 ORTHO05D009861 2.3e-15 86.3 59 78.0
BraA01t01511Z Brassica rapa HOM05D007813 ORTHO05D009861 3.9e-15 85.5 132 43.2
CsaV3_5G021820 Cucumis sativus L. HOM05D007813 ORTHO05D009861 3.9e-15 85.5 135 41.5
C01p19700 Brassica napus HOM05D007813 ORTHO05D009861 5.1e-15 85.1 132 42.4
BolC1t01897H Brassica oleracea HOM05D007813 ORTHO05D009861 5.1e-15 85.1 132 42.4
Cpa.g.sc30.28 Carica papaya HOM05D007813 ORTHO05D009861 1.1e-14 84.0 134 41.8
AL7G28850 Arabidopsis lyrata HOM05D007813 ORTHO05D009861 3.3e-14 82.4 131 43.5
Sp7g22350 Schrenkiella parvula HOM05D007813 ORTHO05D009861 3.3e-14 82.4 141 48.9
EL10Ac9g22652 Beta vulgaris HOM05D000001 ORTHO05D000003 4.3e-14 82.0 158 39.9
FvH4_4g37240 Fragaria vesca HOM05D007813 ORTHO05D009861 4.3e-14 82.0 137 41.6
FAN07G2714 Fragaria x ananassa HOM05D007813 ORTHO05D009861 7.3e-14 81.3 135 42.2
Sabra07G0000100 Salix brachista HOM05D007813 ORTHO05D009861 7.3e-14 81.3 137 41.6
QL01p000818 Quercus lobata HOM05D007813 ORTHO05D009861 9.6e-14 80.9 131 51.9
TWI53G2082 Tripterygium wilfordii HOM05D007813 ORTHO05D009861 9.6e-14 80.9 140 39.3
MD13G1002400 Malus domestica HOM05D007813 ORTHO05D009861 1.3e-13 80.5 140 45.7
FAN17G2972 Fragaria x ananassa HOM05D007813 ORTHO05D009861 2.1e-13 79.7 137 42.3
MELO3C005074.2 Cucumis melo HOM05D007813 ORTHO05D009861 2.8e-13 79.3 143 37.8
Ah.01g003370 Amaranthus hybridus HOM05D007813 ORTHO05D009861 4.8e-13 78.6 159 42.8
BcaC09g50873 Brassica carinata HOM05D007813 ORTHO05D009861 4.8e-13 78.6 128 42.2
Sed0004061 Sechium edule HOM05D007813 ORTHO05D009861 6.2e-13 78.2 142 43.0
Lju470C5T0 Lonicera japonica HOM05D007813 ORTHO05D009861 8.1e-13 77.8 129 43.4
unitig_699.g19640 Utricularia gibba HOM05D007813 ORTHO05D009861 8.1e-13 77.8 130 42.3
CANSAT78G1292 Cannabis sativa HOM05D007813 ORTHO05D009861 1.4e-12 77.0 154 38.3
RcHm_v2.0_Chr4g0447031 Rosa chinensis HOM05D007813 ORTHO05D009861 1.4e-12 77.0 139 48.9
Ciclev10032850m.g Citrus clementina HOM05D007813 ORTHO05D009861 2.4e-12 76.3 143 39.2
HanXRQChr11g0332791 Helianthus annuus HOM05D007813 ORTHO05D009861 4.0e-12 75.5 123 39.8
Prupe.1G350000 Prunus persica HOM05D007813 ORTHO05D009861 4.0e-12 75.5 141 43.3
Lsat_1_v5_gn_6_66140 Lactuca sativa HOM05D007813 ORTHO05D009861 2.0e-11 73.2 142 36.6
Atru.chr11.1262 Acer truncatum HOM05D007813 ORTHO05D009861 2.6e-11 72.8 136 39.7
Manes.11G001000 Manihot esculenta HOM05D007813 ORTHO05D009861 2.6e-11 72.8 124 41.1
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 4.5e-11 72.0 120 42.5
Duzib248G1033 Durio zibethinus HOM05D007813 ORTHO05D009861 7.6e-11 71.2 164 34.8
Nn3g16575 Nelumbo nucifera HOM05D007813 ORTHO05D009861 7.6e-11 71.2 139 43.9
Aqoxy7G00887 Aquilegia oxysepala HOM05D007813 ORTHO05D009861 1.7e-10 70.1 142 37.3
PSO675G5803 Papaver somniferum HOM05D007813 ORTHO05D009861 1.7e-10 70.1 139 36.7
PSO717G0067 Papaver somniferum HOM05D007813 ORTHO05D009861 2.2e-10 69.7 133 37.6
COL.COLO4_33123 Corchorus olitorius HOM05D007813 ORTHO05D009861 1.1e-09 67.4 158 34.2
AUR62014985 Chenopodium quinoa HOM05D007813 ORTHO05D009861 1.4e-09 67.0 137 37.2
TAR374G1573 Trochodendron aralioides HOM05D007813 ORTHO05D009861 1.9e-09 66.6 138 39.1
CiPaw.16G001800 Carya illinoinensis HOM05D007813 ORTHO05D009861 2.4e-09 66.2 137 47.4
ECA233G3331 Erigeron canadensis HOM05D007813 ORTHO05D009861 7.1e-09 64.7 133 36.8
CDE02G1922 Ceratophyllum demersum HOM05D000644 ORTHO05D000504 9.3e-09 64.3 152 34.2
Thecc.02G153800 Theobroma cacao HOM05D007813 ORTHO05D009861 2.7e-08 62.8 161 32.9
Ca_23410_v3 Cicer arietinum L. HOM05D007813 ORTHO05D009861 1.3e-07 60.5 136 33.8
Psat4g167360 Pisum sativum HOM05D007813 ORTHO05D009861 1.8e-07 60.1 140 35.0
Gohir.D02G190500 Gossypium hirsutum HOM05D007813 ORTHO05D009861 2.3e-07 59.7 166 31.3
AUR62029135 Chenopodium quinoa HOM05D007813 ORTHO05D009861 6.7e-07 58.2 136 33.1
Gorai.005G213200 Gossypium raimondii HOM05D007813 ORTHO05D009861 6.7e-07 58.2 164 31.1
Lj2g0017100 Lotus japonicus HOM05D007813 ORTHO05D009861 6.7e-07 58.2 124 45.2
Gohir.A03G167400 Gossypium hirsutum HOM05D007813 ORTHO05D009861 8.7e-07 57.8 164 30.5
Glyma.09G285400 Glycine max HOM05D007813 ORTHO05D009861 1.9e-06 56.6 129 35.7


User provided reference genes

Program Settings