Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003432g0040 Nicotiana tabacum HOM05D007781 ORTHO05D009769 7.2e-121 438.3 468 100.0
CAN.G1164.27 Capsicum annuum HOM05D007781 ORTHO05D009769 1.2e-64 251.5 472 63.8
Nitab4.5_0007940g0030 Nicotiana tabacum HOM05D007781 ORTHO05D009769 1.1e-63 248.4 203 84.2
PGSC0003DMG400029720 Solanum tuberosum HOM05D007781 ORTHO05D009769 9.9e-62 241.9 478 61.7
Sopen02g023130 Solanum pennellii HOM05D007781 ORTHO05D009769 3.5e-59 233.4 183 81.4
Solyc02g078270.3 Solanum lycopersicum HOM05D007781 ORTHO05D009769 1.5e-49 201.4 183 74.9
Peaxi162Scf00736g00429 Petunia axillaris HOM05D007781 ORTHO05D009769 1.0e-26 125.6 114 83.3
MSTRG.14698 Avicennia marina HOM05D007781 ORTHO05D009769 2.9e-21 107.5 187 54.5
TAR627G0113 Trochodendron aralioides HOM05D007781 ORTHO05D009769 6.7e-18 96.3 116 68.1
Dinv40553 Davidia involucrata HOM05D007781 ORTHO05D009769 1.1e-17 95.5 102 73.5
Hma1.2p1_0126F.1_g059410 Hydrangea macrophylla HOM05D007781 ORTHO05D009769 1.1e-17 95.5 131 60.3
Cc02_g13310 Coffea canephora HOM05D007781 ORTHO05D009769 1.5e-17 95.1 145 58.6
Duzib235G1462 Durio zibethinus HOM05D007781 ORTHO05D009769 2.0e-17 94.7 141 56.0
Migut.H01490 Erythranthe guttata HOM05D007781 ORTHO05D009769 3.3e-17 94.0 173 50.3
Thecc.06G188400 Theobroma cacao HOM05D007781 ORTHO05D009769 3.3e-17 94.0 93 74.2
MD05G1313200 Malus domestica HOM05D007781 ORTHO05D009769 2.8e-16 90.9 114 66.7
Ciclev10017149m.g Citrus clementina HOM05D007781 ORTHO05D009769 3.7e-16 90.5 142 59.9
CANSAT35G1759 Cannabis sativa HOM05D007781 ORTHO05D009769 8.2e-16 89.4 89 79.8
Gohir.A05G161900 Gossypium hirsutum HOM05D007781 ORTHO05D009769 8.2e-16 89.4 92 71.7
Gohir.D05G164700 Gossypium hirsutum HOM05D007781 ORTHO05D009769 8.2e-16 89.4 92 71.7
Gorai.009G169900 Gossypium raimondii HOM05D007781 ORTHO05D009769 8.2e-16 89.4 92 71.7
GSVIVG01003209001 Vitis vinifera HOM05D007781 ORTHO05D009769 1.4e-15 88.6 89 77.5
CDE10G1000 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 1.8e-15 88.2 134 59.0
MD10G1295400 Malus domestica HOM05D007781 ORTHO05D009769 1.8e-15 88.2 158 50.6
FAN16G0963 Fragaria x ananassa HOM05D007781 ORTHO05D009769 2.4e-15 87.8 97 73.2
FvH4_3g09310 Fragaria vesca HOM05D007781 ORTHO05D009769 3.1e-15 87.4 127 60.6
FAN11G2776 Fragaria x ananassa HOM05D007781 ORTHO05D009769 3.1e-15 87.4 127 60.6
SGA_v2.0_scaffold49G18292 Striga asiatica HOM05D007781 ORTHO05D009769 3.1e-15 87.4 164 51.2
CiPaw.09G059400 Carya illinoinensis HOM05D007781 ORTHO05D009769 5.3e-15 86.7 109 69.7
RcHm_v2.0_Chr5g0008291 Rosa chinensis HOM05D007781 ORTHO05D009769 5.3e-15 86.7 98 71.4
FAN21G0375 Fragaria x ananassa HOM05D007781 ORTHO05D009769 9.1e-15 85.9 146 54.1
Sed0016416 Sechium edule HOM05D007781 ORTHO05D009769 9.1e-15 85.9 93 74.2
Sc17g0006220 Simmondsia chinensis HOM05D007781 ORTHO05D009769 2.0e-14 84.7 116 62.9
Actinidia05631 Actinidia chinensis HOM05D007781 ORTHO05D009769 2.6e-14 84.3 95 74.7
ClCG03G006020 Citrullus lanatus HOM05D007781 ORTHO05D009769 3.4e-14 84.0 127 59.1
Oeu053970.1 Olea europaea HOM05D007781 ORTHO05D009769 3.4e-14 84.0 108 64.8
PGR042G1810 Punica granatum HOM05D007781 ORTHO05D009769 4.5e-14 83.6 131 60.3
Glyma.07G196200 Glycine max HOM05D007781 ORTHO05D009769 5.9e-14 83.2 88 75.0
CsaV3_1G012280 Cucumis sativus L. HOM05D007781 ORTHO05D009769 7.7e-14 82.8 128 61.7
Nn1g06568 Nelumbo nucifera HOM05D007781 ORTHO05D009769 7.7e-14 82.8 100 69.0
Prupe.4G046600 Prunus persica HOM05D007781 ORTHO05D009769 7.7e-14 82.8 125 60.8
Hund21227 Selenicereus undatus HOM05D007781 ORTHO05D009769 1.0e-13 82.4 92 72.8
COL.COLO4_31480 Corchorus olitorius HOM05D007781 ORTHO05D009769 1.7e-13 81.6 92 64.1
Lj4g0009430 Lotus japonicus HOM05D007781 ORTHO05D009769 1.7e-13 81.6 91 74.7
Manes.16G027000 Manihot esculenta HOM05D007781 ORTHO05D009769 2.2e-13 81.3 85 78.8
Lsat_1_v5_gn_7_21141 Lactuca sativa HOM05D007781 ORTHO05D009769 2.9e-13 80.9 122 63.1
MELO3C002600.2 Cucumis melo HOM05D007781 ORTHO05D009769 3.8e-13 80.5 139 58.3
Phvul.002G234100 Phaseolus vulgaris HOM05D007781 ORTHO05D009769 5.0e-13 80.1 84 73.8
Haze_06475 Corylus avellana HOM05D007781 ORTHO05D009769 8.5e-13 79.3 108 62.0
Potri.004G043100 Populus trichocarpa HOM05D007781 ORTHO05D009769 8.5e-13 79.3 92 72.8
THA.LOC104812795 Tarenaya hassleriana HOM05D007781 ORTHO05D009769 8.5e-13 79.3 88 75.0
DCAR_028076 Daucus carota HOM05D007781 ORTHO05D009769 1.4e-12 78.6 72 56.9
TPR.G12128 Trifolium pratense HOM05D007781 ORTHO05D009769 1.9e-12 78.2 88 72.7
VMungo0251G3178 Vigna mungo HOM05D007781 ORTHO05D009769 1.9e-12 78.2 84 71.4
Psat7g113680 Pisum sativum HOM05D007781 ORTHO05D009769 3.2e-12 77.4 121 60.3
Sabra04G0026700 Salix brachista HOM05D007781 ORTHO05D009769 7.2e-12 76.3 138 57.2
Sp7g19740 Schrenkiella parvula HOM05D007781 ORTHO05D009769 7.2e-12 76.3 97 70.1
Eucgr.E03314 Eucalyptus grandis HOM05D007781 ORTHO05D009769 1.6e-11 75.1 122 55.7
HPP92_027869 Vanilla planifolia HOM05D007781 ORTHO05D009769 1.6e-11 75.1 182 44.0
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 2.7e-11 74.3 85 78.8
A08p15070 Brassica napus HOM05D007781 ORTHO05D009769 2.7e-11 74.3 86 75.6
C03p83160 Brassica napus HOM05D001541 ORTHO05D009769 2.7e-11 74.3 86 75.6
Lalb_Chr16g0383721 Lupinus albus HOM05D007781 ORTHO05D009769 2.7e-11 74.3 94 70.2
CDE10G0168 Ceratophyllum demersum HOM05D007781 ORTHO05D009769 4.7e-11 73.6 127 55.1
Thhalv10026412m.g Eutrema salsugineum HOM05D007781 ORTHO05D009769 1.0e-10 72.4 85 75.3
Aa31LG6G3610 Aethionema arabicum HOM05D007781 ORTHO05D009769 2.3e-10 71.2 99 64.6
BcaC01g00689 Brassica carinata HOM05D001738 ORTHO05D001644 3.0e-10 70.9 86 75.6
BolC3t20599H Brassica oleracea HOM05D007781 ORTHO05D009769 3.0e-10 70.9 86 75.6
CARHR228320 Cardamine hirsuta HOM05D007781 ORTHO05D009769 3.0e-10 70.9 86 70.9
HanXRQChr04g0124061 Helianthus annuus HOM05D007781 ORTHO05D009769 3.0e-10 70.9 154 51.9
CSS0040858 Camellia sinensis var. sinensis HOM05D007781 ORTHO05D009769 6.7e-10 69.7 38 73.7
ECA236G0601 Erigeron canadensis HOM05D007781 ORTHO05D009769 6.7e-10 69.7 186 44.6
arahy.Tifrunner.gnm1.ann1.KV0YZV Arachis hypogaea HOM05D007781 ORTHO05D009769 8.8e-10 69.3 92 68.5
arahy.Tifrunner.gnm1.ann1.QC0LUE Arachis hypogaea HOM05D007781 ORTHO05D009769 8.8e-10 69.3 92 68.5
Os01g0612700 Oryza sativa ssp. japonica HOM05D021202 ORTHO05D009769 1.1e-09 68.9 138 53.6
TWI38G0207 Tripterygium wilfordii HOM05D007781 ORTHO05D009769 4.4e-09 67.0 40 72.5
PSO541G0656 Papaver somniferum HOM05D007781 ORTHO05D009769 1.3e-08 65.5 90 65.6
PSO675G6168 Papaver somniferum HOM05D007781 ORTHO05D009769 1.3e-08 65.5 90 66.7
SHI01775 Sapria himalayana HOM05D007781 ORTHO05D009769 2.2e-08 64.7 40 75.0
Ah.14g089440 Amaranthus hybridus HOM05D007781 ORTHO05D009769 2.8e-08 64.3 36 75.0
Medtr4g088850 Medicago truncatula HOM05D007781 ORTHO05D009769 2.8e-08 64.3 83 44.6
AT4G21610 Arabidopsis thaliana HOM05D007781 ORTHO05D009769 3.7e-08 63.9 99 63.6
Carub.0007s1977 Capsella rubella HOM05D007781 ORTHO05D009769 3.7e-08 63.9 39 69.2
unitig_744.g24534 Utricularia gibba HOM05D007781 ORTHO05D009769 3.7e-08 63.9 141 48.2
AL7G32390 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.8e-08 63.5 99 62.6
Aqoxy1G02434 Aquilegia oxysepala HOM05D007781 ORTHO05D009769 8.2e-08 62.8 121 52.1
Gohir.A11G117400 Gossypium hirsutum HOM05D007781 ORTHO05D009769 3.1e-07 60.8 69 47.8
Cfa000439 Carpinus fangiana HOM05D007781 ORTHO05D009769 4.5e-06 57.0 97 37.1


User provided reference genes

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