Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 3.1e-128 461.8 235 100.0
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 6.0e-124 447.6 235 96.6
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 1.7e-107 392.9 234 85.9
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 1.3e-99 366.7 218 85.3
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 1.9e-93 346.3 233 75.1
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 2.4e-93 345.9 233 73.8
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 3.2e-93 345.5 233 72.5
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 5.4e-93 344.7 234 75.6
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 3.5e-92 342.0 233 73.4
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 7.9e-92 340.9 229 75.1
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 6.6e-91 337.8 234 73.5
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 1.1e-90 337.0 234 73.1
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.9e-90 336.3 234 73.5
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 7.4e-90 334.3 233 72.5
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 4.8e-89 331.6 234 70.1
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 6.2e-89 331.3 234 70.1
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 8.1e-89 330.9 234 70.1
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 3.1e-88 328.9 226 73.9
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 3.1e-88 328.9 233 69.5
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 4.0e-88 328.6 233 72.1
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 5.3e-88 328.2 234 69.7
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 9.0e-88 327.4 234 71.4
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 1.5e-87 326.6 234 70.9
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 1.5e-87 326.6 226 73.0
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 2.0e-87 326.2 234 68.4
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 2.6e-87 325.9 235 69.4
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 2.6e-87 325.9 234 70.5
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 3.4e-87 325.5 221 73.8
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 9.9e-87 323.9 226 70.8
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 1.3e-86 323.6 233 70.0
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.7e-86 323.2 235 68.5
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.7e-86 323.2 235 68.1
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.7e-86 323.2 235 68.5
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 2.9e-86 322.4 235 68.1
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 3.8e-86 322.0 237 68.8
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 3.8e-86 322.0 234 70.5
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 8.4e-86 320.9 237 68.8
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 9.3e-85 317.4 234 67.5
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 1.2e-84 317.0 234 67.5
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 2.7e-84 315.8 226 71.2
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 4.6e-84 315.1 213 73.2
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.6e-84 315.1 234 65.4
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 6.0e-84 314.7 234 67.1
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 7.9e-84 314.3 235 68.9
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 7.9e-84 314.3 228 71.1
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 3.0e-83 312.4 234 65.8
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 6.7e-83 311.2 236 67.8
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 6.7e-83 311.2 225 68.4
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 6.7e-83 311.2 226 69.9
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 1.5e-82 310.1 233 67.4
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.5e-82 310.1 234 67.5
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.5e-82 310.1 251 64.9
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 3.3e-82 308.9 229 69.4
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 3.3e-82 308.9 234 66.2
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 3.3e-82 308.9 227 68.3
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 9.6e-82 307.4 234 67.1
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 2.1e-81 306.2 224 68.8
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 6.2e-81 304.7 214 72.0
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 8.1e-81 304.3 224 68.3
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 1.8e-80 303.1 234 67.1
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 4.0e-80 302.0 225 66.7
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 4.0e-80 302.0 219 70.3
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 5.3e-80 301.6 235 66.4
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 6.9e-80 301.2 232 65.9
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 9.0e-80 300.8 229 66.8
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 1.2e-79 300.4 223 68.2
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 1.5e-79 300.1 214 67.8
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 2.6e-79 299.3 229 64.2
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 5.8e-79 298.1 231 66.2
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 2.9e-78 295.8 230 63.9
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 2.9e-78 295.8 213 70.0
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 1.9e-77 293.1 238 63.9
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 1.9e-77 293.1 229 65.5
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 4.2e-77 292.0 235 62.6
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 9.3e-77 290.8 235 64.7
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 3.5e-76 288.9 235 61.3
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 7.9e-76 287.7 229 63.3
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 1.0e-75 287.3 235 61.7
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.0e-75 287.3 233 63.1
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 2.3e-75 286.2 235 61.7
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 2.3e-75 286.2 235 61.7
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 6.7e-75 284.6 220 63.2
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 8.7e-75 284.3 235 61.3
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 9.6e-74 280.8 235 60.0
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 2.8e-73 279.3 235 59.6
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 8.2e-73 277.7 237 59.9
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 1.4e-72 276.9 235 59.6
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 1.8e-72 276.6 236 58.9
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 3.1e-72 275.8 233 61.4
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 4.5e-71 271.9 254 55.1
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 7.2e-69 264.6 223 61.4
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 7.9e-68 261.2 217 59.4
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 1.0e-67 260.8 208 63.0
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 6.5e-62 241.5 224 56.2
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 2.3e-59 233.0 136 83.8
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 2.8e-57 226.1 228 53.1
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 8.2e-57 224.6 155 72.9
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 5.3e-56 221.9 185 64.9
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 3.6e-52 209.1 152 71.7
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 2.2e-46 189.9 148 63.5
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 3.8e-46 189.1 165 61.8
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 4.0e-43 179.1 212 45.3
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 5.3e-40 168.7 235 45.1
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 1.6e-39 167.2 154 53.9
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 1.0e-38 164.5 220 40.9
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 8.5e-38 161.4 226 41.6
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 1.9e-37 160.2 216 37.0
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 1.8e-35 153.7 226 35.8
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 5.7e-34 148.7 229 36.2
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.2e-31 141.0 102 70.6
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 2.2e-30 136.7 117 58.1
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 4.9e-25 119.0 72 75.0
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 2.4e-24 116.7 110 55.5
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 1.1e-21 107.8 201 33.3
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 7.5e-10 68.6 88 47.7
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 7.5e-10 68.6 88 47.7
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 2.9e-09 66.6 93 44.1
Nitab4.5_0000187g0300 Nicotiana tabacum HOM05D006862 ORTHO05D284191 2.4e-08 63.5 104 41.3
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 9.2e-08 61.6 43 60.5


User provided reference genes

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