Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 0.0e+00 1212.6 634 100.0
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.9e-302 1042.0 634 89.3
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 3.3e-262 908.3 635 78.1
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 5.7e-262 907.5 635 78.1
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 7.4e-262 907.1 635 78.1
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 1.3e-237 826.6 601 75.9
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.5e-222 776.5 631 67.7
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 4.9e-221 771.5 608 68.8
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 2.7e-219 765.8 633 66.2
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 3.5e-219 765.4 611 67.9
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 3.9e-218 761.9 632 65.7
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 4.3e-217 758.4 605 68.6
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 7.3e-217 757.7 638 65.7
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 1.2e-214 750.4 636 65.1
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 5.8e-214 748.0 645 64.0
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 1.3e-213 746.9 608 67.1
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 1.7e-213 746.5 611 66.6
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 2.2e-213 746.1 604 67.2
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 6.4e-213 744.6 627 65.1
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-212 743.8 634 65.1
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 1.4e-212 743.4 605 67.8
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 1.4e-212 743.4 635 64.3
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 1.9e-212 743.0 631 64.7
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 3.2e-212 742.3 649 63.6
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 1.6e-211 740.0 605 66.0
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 6.0e-211 738.0 635 64.7
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 6.0e-211 738.0 628 65.0
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 6.0e-211 738.0 635 64.1
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 7.8e-211 737.6 633 64.9
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 7.8e-211 737.6 629 65.5
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 1.0e-210 737.3 601 66.7
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 1.0e-210 737.3 642 63.7
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 1.0e-210 737.3 613 65.9
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 1.7e-210 736.5 635 63.6
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.0e-210 735.7 633 64.8
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 3.9e-210 735.3 630 64.8
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 5.0e-210 734.9 601 66.9
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 5.0e-210 734.9 601 67.1
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 8.6e-210 734.2 601 66.4
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 8.6e-210 734.2 608 66.1
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 3.3e-209 732.3 604 65.7
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 3.3e-209 732.3 619 64.0
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 7.3e-209 731.1 639 64.5
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 9.5e-209 730.7 608 65.6
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 1.6e-208 729.9 608 65.6
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 2.1e-208 729.6 610 65.2
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 4.7e-208 728.4 641 63.2
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 1.4e-207 726.9 645 63.7
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 3.1e-207 725.7 643 64.1
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 6.8e-207 724.5 617 64.5
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.2e-206 723.8 630 64.0
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 2.6e-206 722.6 619 64.9
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 2.6e-206 722.6 716 58.0
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 1.2e-203 713.8 616 63.5
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 1.2e-203 713.8 615 63.4
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 3.5e-203 712.2 608 64.5
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 4.6e-203 711.8 618 63.3
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 1.3e-202 710.3 610 63.8
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 1.3e-202 710.3 635 61.9
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 3.0e-202 709.1 641 62.2
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 5.1e-202 708.4 616 63.5
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 1.1e-201 707.2 622 63.2
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 2.5e-201 706.1 624 62.5
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 3.3e-201 705.7 616 63.5
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 3.3e-201 705.7 607 63.9
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 4.3e-201 705.3 630 62.4
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 7.3e-201 704.5 629 62.5
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 8.1e-200 701.0 657 60.4
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 1.8e-199 699.9 622 61.9
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 3.1e-199 699.1 620 63.4
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 5.8e-198 694.9 630 61.7
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 4.9e-197 691.8 631 61.5
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 8.3e-197 691.0 607 62.9
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 1.1e-196 690.6 633 61.6
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.1e-195 686.4 607 62.6
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 2.1e-195 686.4 607 62.3
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.3e-194 683.7 640 61.6
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 2.3e-194 682.9 607 62.1
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 2.5e-193 679.5 607 62.3
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 7.3e-193 677.9 630 60.5
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 1.6e-192 676.8 631 60.5
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 3.6e-192 675.6 488 73.2
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.4e-191 673.7 629 60.3
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 2.4e-191 672.9 616 61.9
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 1.3e-189 667.2 603 61.4
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 2.7e-187 659.4 426 79.6
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 2.3e-186 656.4 644 57.6
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 4.6e-179 632.1 543 65.0
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 1.3e-176 624.0 373 87.4
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 3.4e-174 615.9 629 56.6
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 1.2e-171 607.4 433 73.0
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 1.1e-169 600.9 610 54.1
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 1.5e-169 600.5 614 54.1
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 3.3e-169 599.4 610 54.4
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 5.3e-167 592.0 391 79.0
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 4.2e-164 582.4 483 65.0
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 6.9e-159 565.1 372 77.7
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 1.3e-157 560.8 446 64.1
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 5.5e-156 555.4 608 51.0
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 5.5e-156 555.4 608 51.0
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 6.7e-146 521.9 502 55.6
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 9.7e-145 518.1 344 77.9
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 6.5e-141 505.4 535 50.8
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 3.9e-138 496.1 457 60.0
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 9.1e-127 458.4 418 61.7
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 6.3e-112 409.1 455 55.4
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 5.0e-101 372.9 349 59.6
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 7.3e-100 369.0 243 78.6
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.8e-99 367.1 349 58.7
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 2.9e-96 357.1 440 47.5
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 1.1e-95 355.1 469 43.9
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 8.9e-82 308.9 431 44.1
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 1.1e-76 292.0 339 52.8
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 4.3e-60 236.9 268 52.6
Oeu031707.1 Olea europaea HOM05D004787 ORTHO05D006972 3.9e-45 187.2 154 67.5
Cfa023088 Carpinus fangiana HOM05D004787 ORTHO05D006972 1.9e-44 184.9 457 34.4
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 2.0e-41 174.9 514 32.7
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 2.2e-40 171.4 517 30.6
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 8.4e-40 169.5 132 69.7
Medtr8g023320 Medicago truncatula HOM05D004787 ORTHO05D006972 6.9e-34 149.8 114 66.7
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 2.0e-28 131.7 310 34.5
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 7.4e-28 129.8 488 28.9
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 8.2e-27 126.3 543 28.7
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 4.5e-25 120.6 491 30.3
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 5.0e-24 117.1 334 31.7
HPP92_022083 Vanilla planifolia HOM05D004787 ORTHO05D006972 9.4e-23 112.8 124 50.0
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 6.1e-22 110.2 345 33.3
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 2.3e-21 108.2 281 31.0
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 8.8e-21 106.3 313 32.9
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 1.1e-20 105.9 313 33.2
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 3.7e-19 100.9 361 30.7
Zm00001eb168130 Zea mays HOM05D004787 ORTHO05D001664 1.4e-18 99.0 74 62.2
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 5.3e-18 97.1 392 29.1
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 4.5e-17 94.0 234 31.2
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 7.7e-17 93.2 408 28.7
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 7.7e-17 93.2 296 29.7
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 1.7e-16 92.0 250 34.4
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 2.2e-16 91.7 255 33.3
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 3.6e-14 84.3 227 33.9
HanXRQChr16g0532231 Helianthus annuus HOM05D004787 ORTHO05D006972 8.0e-14 83.2 119 42.9
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 5.2e-13 80.5 384 27.9
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 5.2e-13 80.5 330 29.1
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 2.6e-12 78.2 246 32.1
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 2.2e-11 75.1 173 33.5
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 3.1e-10 71.2 169 33.7
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 7.0e-10 70.1 226 31.9


User provided reference genes

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