Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003411g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-59 231.9 112 100.0
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.3e-22 107.8 61 83.6
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-21 105.5 62 79.0
Nitab4.5_0000065g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-21 105.1 119 51.3
Nitab4.5_0007583g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-21 105.1 62 77.4
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-20 103.6 62 79.0
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.0e-20 101.3 75 65.3
Nitab4.5_0001250g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-19 99.8 61 73.8
Nitab4.5_0000481g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-19 99.4 76 60.5
Nitab4.5_0001512g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-19 99.4 61 75.4
Nitab4.5_0007148g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-19 99.0 62 77.4
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 4.2e-19 98.2 75 64.0
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-19 97.1 61 73.8
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-18 96.7 75 64.0
Nitab4.5_0000841g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-18 96.3 75 62.7
Nitab4.5_0026749g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-18 95.5 61 70.5
Nitab4.5_0000348g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.7e-18 94.7 89 56.2
Nitab4.5_0000015g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-18 94.4 107 49.5
Nitab4.5_0002206g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.1e-18 94.4 61 72.1
Nitab4.5_0000115g0150 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.0e-18 94.0 57 77.2
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-17 93.6 61 70.5
Nitab4.5_0006582g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-17 93.6 61 70.5
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-17 93.2 61 68.9
Nitab4.5_0008368g0050 Nicotiana tabacum HOM05D003574 ORTHO05D001773 1.8e-17 92.8 61 68.9
Nitab4.5_0012756g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-17 92.4 62 69.4
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-17 92.4 63 68.3
Nitab4.5_0003015g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-16 90.1 75 60.0
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-16 89.7 61 72.1
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-16 89.7 75 60.0
Nitab4.5_0002884g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-16 88.6 62 69.4
Nitab4.5_0000645g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-15 86.3 75 54.7
Nitab4.5_0009406g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.8e-15 85.5 119 42.9
Nitab4.5_0022390g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.8e-15 84.7 55 69.1
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.2e-15 84.0 117 39.3
PGSC0003DMG400043951 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.1e-14 83.6 113 40.7
Nitab4.5_0001115g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-14 81.3 120 42.5
PGSC0003DMG400031332 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.3e-14 81.3 113 39.8
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.6e-13 79.7 113 38.9
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.7e-13 79.0 109 43.1
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-13 78.2 117 36.8
Nitab4.5_0001859g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-13 78.2 118 40.7
PGSC0003DMG400043149 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.3e-12 76.6 106 39.6
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-12 76.3 116 37.1
Nitab4.5_0003551g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-12 75.1 109 37.6
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 5.0e-12 74.7 113 38.1
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 8.5e-12 73.9 113 38.9
PGSC0003DMG400036224 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.1e-11 73.6 57 63.2
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.5e-11 73.2 59 55.9
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.9e-11 72.8 113 37.2
Nitab4.5_0000857g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-11 72.0 106 44.3
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-11 71.6 115 37.4
Nitab4.5_0004469g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.2e-11 70.9 62 58.1
Nitab4.5_0004620g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.4e-11 70.5 75 46.7
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-10 70.1 46 65.2
Nitab4.5_0002538g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-10 69.3 73 47.9
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-10 68.9 117 34.2
MSTRG.26889 Avicennia marina HOM05D000995 ORTHO05D001773 3.6e-10 68.6 58 51.7
Nitab4.5_0003811g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-09 67.0 71 47.9
Nitab4.5_0004222g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-09 67.0 90 41.1
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-09 66.6 84 44.0
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 1.4e-09 66.6 60 51.7
Nitab4.5_0002690g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-09 65.5 74 48.6
Nitab4.5_0000679g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-09 65.1 87 42.5
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-08 63.5 73 47.9
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-08 62.8 85 44.7
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-08 62.4 71 45.1
Nitab4.5_0013377g0010 Nicotiana tabacum HOM05D003574 ORTHO05D010997 3.4e-08 62.0 39 69.2
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.7e-08 61.2 73 43.8
Nitab4.5_0009418g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.7e-08 61.2 55 54.5
Nitab4.5_0000022g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.5e-08 60.8 73 43.8
ClCG10G015790 Citrullus lanatus HOM05D000995 ORTHO05D001773 2.2e-07 59.3 63 46.0
Nitab4.5_0001057g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-07 59.3 107 41.1
Nitab4.5_0003185g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-07 59.3 117 35.0
Nitab4.5_0020094g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-07 59.3 39 66.7
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.8e-07 58.2 39 69.2
Nitab4.5_0001599g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.3e-07 57.8 73 43.8
Nitab4.5_0000079g0320 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-06 57.0 79 45.6
Nitab4.5_0000053g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-06 56.6 85 41.2
Sopen12g018970 Solanum pennellii HOM05D003574 ORTHO05D002175 1.4e-06 56.6 73 35.6
SalBow8G2838 Salvia bowleyana HOM05D000995 ORTHO05D001773 2.4e-06 55.8 55 45.5
Sed0013325 Sechium edule HOM05D000995 ORTHO05D001773 2.4e-06 55.8 77 41.6
Nitab4.5_0000160g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-06 55.5 38 71.1
Nitab4.5_0006058g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-06 55.5 73 39.7
Sed0019125 Sechium edule HOM05D000995 ORTHO05D001773 3.1e-06 55.5 77 41.6
PGSC0003DMG400040325 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.1e-06 55.5 43 60.5
Nitab4.5_0000043g0360 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.4e-06 54.7 116 31.9
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.0e-06 54.3 40 57.5
SalBow2G3402 Salvia bowleyana HOM05D000995 ORTHO05D001773 7.0e-06 54.3 55 43.6
ClCG02G008620 Citrullus lanatus HOM05D000995 ORTHO05D001773 9.1e-06 53.9 64 40.6


User provided reference genes

Program Settings