Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.2e-151 538.9 267 100.0
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.5e-142 508.8 268 94.4
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 1.5e-134 483.0 269 88.8
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 1.6e-133 479.6 269 87.0
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 2.7e-133 478.8 269 87.0
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 4.6e-104 381.7 299 69.2
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 1.2e-101 373.6 268 71.3
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 3.6e-101 372.1 269 71.0
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 6.2e-101 371.3 285 68.4
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 1.1e-100 370.5 269 69.5
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.8e-100 369.8 269 70.3
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 4.0e-100 368.6 271 71.2
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 4.0e-100 368.6 269 70.6
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 2.2e-98 362.8 263 68.8
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 6.4e-98 361.3 284 66.2
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 6.4e-98 361.3 274 69.0
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.1e-97 360.5 271 68.6
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 1.4e-97 360.1 274 67.9
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.4e-97 360.1 271 68.6
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 1.9e-97 359.8 299 64.2
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 4.1e-97 358.6 270 68.5
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 5.4e-97 358.2 270 68.5
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 2.1e-96 356.3 276 65.6
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 1.7e-95 353.2 268 66.4
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 3.0e-95 352.4 267 66.7
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 3.9e-95 352.1 273 67.8
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 8.6e-95 350.9 272 68.0
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 1.1e-94 350.5 271 68.6
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.1e-94 350.5 274 66.4
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 1.5e-94 350.1 274 67.5
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 3.3e-94 349.0 278 65.5
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 4.3e-94 348.6 269 65.4
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 4.3e-94 348.6 319 60.5
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 4.3e-94 348.6 300 60.7
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 2.8e-93 345.9 234 70.1
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 4.7e-93 345.1 271 65.3
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 6.2e-93 344.7 267 65.5
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 1.1e-92 344.0 268 64.2
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 2.3e-92 342.8 271 65.3
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 3.1e-92 342.4 278 66.2
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 6.8e-92 341.3 269 65.8
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 8.9e-92 340.9 268 66.8
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 8.9e-92 340.9 268 66.8
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 1.2e-91 340.5 268 66.8
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.5e-91 340.1 267 65.2
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.5e-91 340.1 269 65.8
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 1.5e-91 340.1 273 63.7
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.0e-91 339.7 274 66.4
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 2.6e-91 339.3 270 64.8
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 2.6e-91 339.3 282 63.5
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 2.6e-91 339.3 276 66.3
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 5.8e-91 338.2 272 64.7
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 7.6e-91 337.8 275 62.5
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 1.3e-90 337.0 244 71.7
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 1.7e-90 336.7 277 65.7
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 4.9e-90 335.1 270 62.6
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 6.4e-90 334.7 269 65.4
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 7.1e-89 331.3 256 67.6
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 2.3e-87 326.2 271 64.6
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 3.0e-87 325.9 313 58.1
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 3.0e-87 325.9 261 63.2
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.1e-86 323.9 267 64.8
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 1.1e-86 323.9 222 73.9
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.1e-86 323.9 274 62.8
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 1.1e-86 323.9 272 61.0
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 1.5e-86 323.6 352 52.8
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 4.3e-86 322.0 275 62.5
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 7.3e-86 321.2 338 55.3
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 2.8e-85 319.3 281 63.3
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 4.7e-85 318.5 270 64.1
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 8.1e-85 317.8 271 64.2
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.8e-84 316.6 208 72.1
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 6.4e-82 308.1 269 61.7
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 1.4e-81 307.0 262 60.3
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 2.4e-81 306.2 274 59.5
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 2.7e-80 302.8 237 66.7
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 3.5e-80 302.4 179 78.8
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 2.3e-79 299.7 276 58.7
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.1e-78 297.4 228 68.0
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 4.3e-78 295.4 265 57.7
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.1e-76 289.3 239 63.2
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 3.1e-76 289.3 273 58.6
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 4.0e-76 288.9 192 75.0
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 4.9e-74 282.0 194 73.2
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 2.4e-73 279.6 182 75.8
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 4.2e-73 278.9 267 53.9
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 5.4e-73 278.5 236 60.6
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 2.1e-72 276.6 262 58.8
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 3.5e-72 275.8 321 51.7
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 8.7e-71 271.2 202 67.3
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 2.5e-70 269.6 182 71.4
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 7.3e-70 268.1 243 61.7
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 2.4e-68 263.1 265 51.3
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 9.0e-68 261.2 185 69.7
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 7.6e-67 258.1 191 68.1
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 4.9e-66 255.4 211 58.8
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 3.0e-63 246.1 250 47.6
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 6.2e-61 238.4 195 63.6
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 2.5e-57 226.5 166 59.6
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 7.9e-56 221.5 185 56.8
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 1.3e-55 220.7 213 50.2
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 6.7e-55 218.4 132 75.8
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 8.7e-55 218.0 288 46.9
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 8.4e-50 201.4 219 48.9
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.0e-42 177.9 186 54.3
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 5.0e-42 175.6 137 67.9
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 3.9e-39 166.0 236 38.1
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 3.3e-38 162.9 193 50.3
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.2e-27 127.9 219 41.1
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 4.0e-23 112.8 107 57.9
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.5e-22 110.9 56 87.5
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 3.8e-18 96.3 90 53.3
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 3.2e-17 93.2 59 71.2
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 3.2e-17 93.2 94 52.1
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 9.4e-17 91.7 63 66.7
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.0e-15 88.2 100 58.0
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 4.4e-14 82.8 88 44.3
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 3.7e-13 79.7 84 53.6
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.4e-12 77.8 77 57.1
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 7.2e-09 65.5 78 48.7


User provided reference genes

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