Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 7.5e-181 637.1 332 100.0
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 9.5e-168 593.6 330 93.9
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 5.2e-158 561.2 330 88.5
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 1.0e-153 547.0 333 86.8
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 1.0e-153 547.0 330 87.0
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 3.0e-153 545.4 330 86.1
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 1.2e-146 523.5 337 83.7
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 1.8e-105 386.7 331 62.5
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 4.8e-103 378.6 307 64.2
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 1.3e-100 370.5 353 58.6
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 2.1e-98 363.2 304 65.1
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 5.1e-97 358.6 345 58.0
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 2.6e-96 356.3 334 59.0
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 2.6e-96 356.3 347 59.9
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 3.7e-95 352.4 345 57.4
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 5.3e-94 348.6 311 58.8
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 1.5e-93 347.1 345 56.8
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 3.8e-92 342.4 343 56.6
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 3.8e-92 342.4 313 58.8
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 6.5e-92 341.7 339 57.2
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 3.2e-91 339.3 297 59.9
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 9.4e-91 337.8 342 56.1
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 6.1e-90 335.1 343 56.9
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 1.0e-89 334.3 342 56.7
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 8.8e-89 331.3 289 59.9
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 2.6e-88 329.7 335 55.2
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 7.4e-88 328.2 294 62.2
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 7.4e-88 328.2 308 58.1
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 9.7e-88 327.8 313 58.1
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 9.7e-88 327.8 293 61.8
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 1.3e-87 327.4 335 57.0
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 2.2e-87 326.6 320 56.9
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 2.2e-87 326.6 321 57.9
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 1.1e-86 324.3 292 59.6
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 1.4e-86 323.9 363 53.4
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 1.4e-86 323.9 290 59.0
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 4.1e-86 322.4 287 60.3
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 4.1e-86 322.4 323 56.3
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.6e-85 320.5 299 59.5
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 3.5e-85 319.3 293 60.1
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 5.9e-85 318.5 314 58.6
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 7.7e-85 318.2 288 60.1
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 1.0e-84 317.8 344 55.2
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 1.3e-84 317.4 337 55.2
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 2.2e-84 316.6 321 56.4
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 1.9e-83 313.5 289 58.8
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 2.5e-83 313.2 341 56.3
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 8.0e-82 308.1 345 51.3
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 6.7e-81 305.1 292 59.2
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 2.2e-79 300.1 300 57.0
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 4.1e-78 295.8 340 50.6
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 7.0e-78 295.0 340 51.8
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 1.1e-75 287.7 337 50.4
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 1.9e-75 287.0 344 50.6
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 2.5e-75 286.6 303 54.5
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 4.2e-75 285.8 348 49.4
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 5.5e-75 285.4 340 50.9
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 1.2e-74 284.3 335 50.4
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 1.2e-74 284.3 337 49.0
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 2.1e-74 283.5 291 54.3
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 1.4e-73 280.8 291 54.3
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 1.8e-73 280.4 291 54.3
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 1.8e-73 280.4 340 52.1
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 3.0e-73 279.6 291 54.0
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 3.0e-73 279.6 305 53.1
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 5.2e-73 278.9 348 49.1
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 8.8e-73 278.1 291 54.0
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 8.8e-73 278.1 292 53.4
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 8.8e-73 278.1 292 53.4
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 8.8e-73 278.1 348 49.1
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 2.0e-72 276.9 291 53.3
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 3.4e-72 276.2 294 54.1
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 7.5e-72 275.0 295 53.6
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 2.8e-71 273.1 349 46.4
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 4.8e-71 272.3 316 51.6
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 7.0e-70 268.5 291 52.6
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 1.3e-68 264.2 336 48.8
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 6.5e-68 261.9 348 46.6
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 1.5e-67 260.8 351 47.3
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 2.8e-66 256.5 379 44.1
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 1.0e-65 254.6 337 44.2
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 1.5e-64 250.8 337 45.1
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 2.0e-64 250.4 308 47.1
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 7.5e-64 248.4 308 46.8
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 2.8e-63 246.5 337 43.9
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 1.2e-61 241.1 287 48.4
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 7.8e-61 238.4 217 59.9
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 8.0e-58 228.4 337 44.5
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 1.1e-54 218.0 296 45.3
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 3.2e-54 216.5 291 47.1
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 4.1e-54 216.1 349 40.1
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 1.9e-51 207.2 240 50.4
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 4.7e-50 202.6 303 42.9
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 7.5e-48 195.3 320 40.3
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 1.3e-44 184.5 269 43.1
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 1.2e-42 177.9 320 39.1
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 3.1e-41 173.3 333 36.6
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 8.3e-39 165.2 207 47.8
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 2.7e-37 160.2 122 62.3
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 6.8e-33 145.6 216 44.4
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 6.4e-31 139.0 104 64.4
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 2.3e-28 130.6 156 47.4
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 6.6e-28 129.0 298 33.9
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 2.8e-26 123.6 93 65.6
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 2.4e-25 120.6 168 46.4
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 3.8e-23 113.2 288 31.9
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 4.9e-23 112.8 328 30.5
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 9.3e-22 108.6 345 29.6
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 9.3e-22 108.6 77 67.5
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 9.3e-22 108.6 289 31.8
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 3.9e-20 103.2 116 57.8
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 2.8e-18 97.1 110 53.6
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 2.9e-15 87.0 239 34.3
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 1.9e-14 84.3 100 52.0
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 2.4e-14 84.0 210 35.7
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 5.4e-14 82.8 200 32.5
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 3.7e-10 70.1 118 37.3
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 1.4e-09 68.2 62 59.7
Thhalv10015964m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 4.2e-06 56.6 158 31.6


User provided reference genes

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