Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003390g0060 Nicotiana tabacum HOM05D024203 ORTHO05D019317 3.8e-55 218.0 117 100.0
Nitab4.5_0000576g0100 Nicotiana tabacum HOM05D000203 ORTHO05D019317 2.5e-30 135.6 153 55.6
Nitab4.5_0000036g0250 Nicotiana tabacum HOM05D000203 ORTHO05D019317 2.0e-27 125.9 153 52.9
Peaxi162Scf00943g00019 Petunia axillaris HOM05D027145 ORTHO05D019317 3.1e-12 75.5 72 51.4
Peaxi162Scf00449g00069 Petunia axillaris HOM05D027145 ORTHO05D019317 2.9e-10 68.9 130 37.7
Peaxi162Scf00943g00016 Petunia axillaris HOM05D000203 ORTHO05D019317 1.2e-08 63.5 104 38.5
Sc24g0001840 Simmondsia chinensis HOM05D000203 ORTHO05D000135 1.2e-08 63.5 107 37.4
Aa31LG6G13390 Aethionema arabicum HOM05D000203 ORTHO05D000135 7.8e-08 60.8 96 38.5
Hund24799 Selenicereus undatus HOM05D005723 ORTHO05D005968 7.8e-08 60.8 72 43.1
Ciclev10007010m.g Citrus clementina HOM05D000203 ORTHO05D000135 1.3e-07 60.1 66 47.0
Ciclev10006708m.g Citrus clementina HOM05D000203 ORTHO05D000135 2.3e-07 59.3 66 43.9
Medtr4g051538 Medicago truncatula HOM05D000203 ORTHO05D000135 2.3e-07 59.3 99 36.4
CAN.G252.6 Capsicum annuum HOM05D024203 ORTHO05D028471 3.0e-07 58.9 95 41.1
Duzib235G1529 Durio zibethinus HOM05D000203 ORTHO05D000135 3.0e-07 58.9 75 40.0
Atru.chr10.1322 Acer truncatum HOM05D000203 ORTHO05D000135 5.1e-07 58.2 99 34.3
ClCG02G012490 Citrullus lanatus HOM05D000203 ORTHO05D000135 5.1e-07 58.2 85 44.7
Lalb_Chr23g0271471 Lupinus albus HOM05D000203 ORTHO05D000135 5.1e-07 58.2 100 39.0
AUR62027600 Chenopodium quinoa HOM05D000203 ORTHO05D000135 6.6e-07 57.8 71 38.0
Prupe.1G087700 Prunus persica HOM05D000203 ORTHO05D000135 6.6e-07 57.8 58 48.3
BcaB07g32580 Brassica carinata HOM05D000203 ORTHO05D000135 1.1e-06 57.0 74 41.9
BcaB07g32581 Brassica carinata HOM05D000203 ORTHO05D000135 1.1e-06 57.0 74 41.9
BcaB07g32582 Brassica carinata HOM05D000203 ORTHO05D000135 1.1e-06 57.0 74 41.9
MD05G1287200 Malus domestica HOM05D000203 ORTHO05D000135 1.1e-06 57.0 75 37.3
Atru.chr10.1015 Acer truncatum HOM05D000203 ORTHO05D010688 1.5e-06 56.6 66 43.9
Atru.chr10.1024 Acer truncatum HOM05D000203 ORTHO05D010688 1.5e-06 56.6 66 43.9
BcaB07g32583 Brassica carinata HOM05D000203 ORTHO05D000135 1.5e-06 56.6 75 41.3
BcaB07g32593 Brassica carinata HOM05D000203 ORTHO05D000135 1.5e-06 56.6 74 41.9
Ciclev10007104m.g Citrus clementina HOM05D000203 ORTHO05D000135 1.5e-06 56.6 66 42.4
Actinidia00343 Actinidia chinensis HOM05D001079 ORTHO05D000135 1.9e-06 56.2 103 31.1
CAN.G763.2 Capsicum annuum HOM05D024203 ORTHO05D028471 1.9e-06 56.2 109 36.7
HanXRQChr14g0431671 Helianthus annuus HOM05D000203 ORTHO05D000135 1.9e-06 56.2 97 39.2
Nitab4.5_0025184g0010 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.9e-06 56.2 77 35.1
PSO675G2437 Papaver somniferum HOM05D000203 ORTHO05D000135 1.9e-06 56.2 68 39.7
PSO675G7023 Papaver somniferum HOM05D000203 ORTHO05D000135 1.9e-06 56.2 80 38.8
CSS0016210 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 2.5e-06 55.8 81 38.3
PSO675G5529 Papaver somniferum HOM05D000203 ORTHO05D000135 2.5e-06 55.8 74 40.5
PSO675G8506 Papaver somniferum HOM05D000203 ORTHO05D000135 2.5e-06 55.8 74 40.5
Potri.001G251400 Populus trichocarpa HOM05D000203 ORTHO05D000135 2.5e-06 55.8 66 40.9
Rhsim11G0149000 Rhododendron simsii HOM05D000203 ORTHO05D000135 2.5e-06 55.8 102 31.4
VMungo0251G1515 Vigna mungo HOM05D000203 ORTHO05D000135 2.5e-06 55.8 97 35.1
AUR62030240 Chenopodium quinoa HOM05D000203 ORTHO05D000135 3.3e-06 55.5 71 36.6
Thhalv10003426m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 3.3e-06 55.5 102 31.4
Nitab4.5_0001030g0170 Nicotiana tabacum HOM05D000203 ORTHO05D000135 3.3e-06 55.5 56 46.4
Sopen02g014580 Solanum pennellii HOM05D027145 ORTHO05D019317 3.3e-06 55.5 72 37.5
Atru.chr5.2239 Acer truncatum HOM05D000203 ORTHO05D000135 4.3e-06 55.1 74 43.2
Ciclev10006503m.g Citrus clementina HOM05D000203 ORTHO05D000135 4.3e-06 55.1 66 42.4
FvH4_6g21070 Fragaria vesca HOM05D000203 ORTHO05D000135 4.3e-06 55.1 83 42.2
Lj9C337T7 Lonicera japonica HOM05D000203 ORTHO05D000135 4.3e-06 55.1 102 30.4
Thecc.06G153600 Theobroma cacao HOM05D000203 ORTHO05D000135 4.3e-06 55.1 75 36.0
Atru.chr10.973 Acer truncatum HOM05D000203 ORTHO05D000135 5.6e-06 54.7 74 41.9
BcaC05g27005 Brassica carinata HOM05D000203 ORTHO05D000135 5.6e-06 54.7 74 41.9
C05p28690 Brassica napus HOM05D000203 ORTHO05D000135 5.6e-06 54.7 74 41.9
BolC5t31589H Brassica oleracea HOM05D000203 ORTHO05D000135 5.6e-06 54.7 74 41.9
CSS0024405 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 5.6e-06 54.7 83 42.2
MBI08_g14958_MAGBIO Magnolia biondii HOM05D000203 ORTHO05D000135 5.6e-06 54.7 66 40.9
Nitab4.5_0000093g0040 Nicotiana tabacum HOM05D009326 ORTHO05D010876 5.6e-06 54.7 65 46.2
Sabra04G0001000 Salix brachista HOM05D000203 ORTHO05D000135 5.6e-06 54.7 90 35.6
A09p36560 Brassica napus HOM05D000203 ORTHO05D000135 7.3e-06 54.3 74 41.9
BraA09t39177Z Brassica rapa HOM05D000203 ORTHO05D000135 7.3e-06 54.3 74 41.9
Ciclev10006958m.g Citrus clementina HOM05D000203 ORTHO05D000135 7.3e-06 54.3 77 36.4
PSO210G5697 Papaver somniferum HOM05D000203 ORTHO05D000135 7.3e-06 54.3 58 43.1
Peaxi162Scf00096g00151 Petunia axillaris HOM05D000203 ORTHO05D010876 7.3e-06 54.3 65 44.6
PGR042G2396 Punica granatum HOM05D000203 ORTHO05D000135 7.3e-06 54.3 84 35.7
TPR.G28086 Trifolium pratense HOM05D000203 ORTHO05D000135 7.3e-06 54.3 108 36.1
TAR362G0500 Trochodendron aralioides HOM05D000203 ORTHO05D000135 7.3e-06 54.3 74 39.2
TAR362G0747 Trochodendron aralioides HOM05D000203 ORTHO05D000135 7.3e-06 54.3 74 39.2
Duzib084G1411 Durio zibethinus HOM05D000203 ORTHO05D000135 9.5e-06 53.9 95 36.8
Gohir.D06G115712 Gossypium hirsutum HOM05D000203 ORTHO05D000135 9.5e-06 53.9 58 44.8
MD13G1257500 Malus domestica HOM05D000203 ORTHO05D000135 9.5e-06 53.9 66 42.4
Nitab4.5_0000047g0270 Nicotiana tabacum HOM05D000203 ORTHO05D000135 9.5e-06 53.9 82 35.4
Oeu017585.1 Olea europaea HOM05D000203 ORTHO05D000135 9.5e-06 53.9 83 36.1
Phvul.002G309400 Phaseolus vulgaris HOM05D000203 ORTHO05D000135 9.5e-06 53.9 97 35.1
PGR102G0889 Punica granatum HOM05D000203 ORTHO05D000135 9.5e-06 53.9 74 39.2
Rhsim11G0028800 Rhododendron simsii HOM05D000203 ORTHO05D000135 9.5e-06 53.9 102 31.4


User provided reference genes

Program Settings