Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.1e-239 832.8 405 100.0
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 7.6e-228 793.5 405 93.6
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 5.7e-223 777.3 425 88.7
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 7.4e-223 776.9 425 88.5
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 2.5e-210 735.3 415 86.5
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 4.5e-204 714.5 425 80.0
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 3.9e-200 701.4 425 79.1
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 2.6e-199 698.7 425 79.3
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 2.6e-196 688.7 424 76.9
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 3.2e-194 681.8 425 74.1
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 3.2e-194 681.8 413 77.7
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 7.2e-194 680.6 424 75.9
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 4.7e-193 677.9 424 75.9
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 6.1e-193 677.6 425 75.1
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.3e-192 675.6 424 75.7
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 4.0e-192 674.9 425 76.2
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 5.2e-192 674.5 425 76.0
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 5.2e-192 674.5 425 75.3
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 3.3e-191 671.8 425 74.8
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 3.3e-191 671.8 425 75.3
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 5.7e-191 671.0 458 76.2
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 7.5e-191 670.6 450 72.2
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 6.3e-190 667.5 427 74.0
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 6.3e-190 667.5 425 74.4
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 1.4e-189 666.4 427 74.0
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 4.1e-189 664.8 425 74.1
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 5.3e-189 664.5 424 75.2
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 7.0e-189 664.1 410 76.6
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 4.5e-188 661.4 408 76.0
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 1.0e-187 660.2 425 72.5
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 1.0e-187 660.2 425 72.2
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.3e-187 659.8 412 77.2
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 8.5e-187 657.1 421 74.6
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 4.2e-186 654.8 425 73.4
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 1.2e-185 653.3 424 72.6
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 6.1e-185 651.0 413 75.3
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 6.1e-185 651.0 414 73.7
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.8e-184 649.4 423 72.8
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.3e-184 649.0 425 71.5
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 1.3e-182 643.3 420 71.2
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 2.8e-182 642.1 425 70.8
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 8.3e-182 640.6 420 71.0
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 1.4e-181 639.8 425 72.5
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 2.4e-181 639.0 425 70.1
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.4e-181 639.0 404 73.3
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 3.1e-181 638.6 424 72.6
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.1e-181 638.3 413 74.1
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 7.0e-181 637.5 425 70.8
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 7.0e-181 637.5 422 73.0
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 9.1e-181 637.1 425 70.4
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 2.0e-180 636.0 425 70.8
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 4.5e-180 634.8 425 70.1
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 1.0e-179 633.6 425 69.2
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.0e-179 633.6 405 73.1
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.3e-179 633.3 425 69.4
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 1.7e-179 632.9 425 72.5
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 2.9e-179 632.1 425 70.6
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 5.0e-179 631.3 426 70.4
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.5e-178 629.8 428 71.3
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.9e-178 629.4 425 69.4
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 2.5e-178 629.0 425 69.4
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 2.5e-178 629.0 425 69.4
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 5.5e-178 627.9 422 70.1
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 7.2e-178 627.5 403 74.7
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 1.2e-177 626.7 425 70.1
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 2.1e-177 625.9 425 69.2
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 2.1e-177 625.9 426 70.0
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 2.8e-177 625.5 396 73.5
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 1.0e-176 623.6 426 69.2
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 4.0e-176 621.7 413 72.2
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 5.2e-176 621.3 402 74.1
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 4.1e-173 611.7 402 72.1
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 9.2e-173 610.5 425 69.2
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 5.9e-172 607.8 426 68.8
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 1.3e-171 606.7 425 66.8
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.3e-171 605.9 394 74.1
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.5e-170 603.2 541 57.7
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 1.2e-169 600.1 425 66.6
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.8e-168 596.3 409 69.7
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 2.3e-168 595.9 426 67.6
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 3.3e-162 575.5 436 64.0
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 1.5e-159 566.6 351 74.6
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 5.8e-159 564.7 470 60.2
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 7.5e-159 564.3 404 68.3
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 4.9e-158 561.6 414 65.2
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 5.6e-154 548.1 423 61.2
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.1e-149 533.9 423 63.1
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 6.0e-148 528.1 386 65.0
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 6.6e-147 524.6 415 61.9
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 6.4e-142 508.1 380 67.4
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 9.2e-141 504.2 361 66.8
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 3.1e-136 489.2 314 73.2
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 1.5e-135 486.9 314 73.6
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 5.3e-128 461.8 405 61.2
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 1.0e-94 351.3 206 81.6
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 1.2e-92 344.4 194 84.0
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 2.5e-85 320.1 346 42.8
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 1.1e-80 304.7 185 76.8
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 5.0e-78 295.8 347 41.8
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 5.2e-75 285.8 347 42.1
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 7.5e-66 255.4 367 33.8
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 3.6e-60 236.5 260 42.3
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 8.6e-46 188.7 106 79.2
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 7.0e-40 169.1 102 74.5
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 1.0e-38 165.2 113 69.9
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 1.0e-38 165.2 113 69.9
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 5.1e-38 162.9 102 73.5
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 7.1e-32 142.5 139 57.6
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 3.2e-24 117.1 64 81.2
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.5e-13 81.6 50 72.0
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 1.9e-13 81.3 49 71.4
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 5.6e-13 79.7 49 71.4
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.0e-10 71.2 48 66.7
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 2.6e-10 70.9 45 71.1
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 1.4e-08 65.1 63 50.8


User provided reference genes

Program Settings