Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 2.2e-141 505.8 280 100.0
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 2.8e-120 435.6 262 91.2
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 9.9e-118 427.2 274 85.8
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 7.1e-116 421.0 274 84.3
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 3.9e-114 415.2 277 83.0
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 9.0e-111 404.1 274 82.1
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 4.6e-99 365.2 267 78.7
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 1.7e-80 303.5 257 69.3
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 2.6e-78 296.2 260 65.8
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 5.5e-76 288.5 265 64.9
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 5.2e-74 282.0 257 65.4
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.7e-72 276.9 261 63.2
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 9.1e-71 271.2 263 64.6
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 3.8e-69 265.8 258 64.0
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 6.5e-69 265.0 275 58.2
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 1.6e-67 260.4 259 62.2
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 8.0e-67 258.1 270 60.7
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 2.3e-66 256.5 259 61.4
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 6.8e-66 255.0 277 57.4
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 1.3e-64 250.8 258 60.5
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 2.8e-64 249.6 235 63.8
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.8e-64 249.6 262 59.9
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 6.3e-64 248.4 259 61.4
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 1.1e-63 247.7 279 59.1
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 4.1e-63 245.7 257 58.8
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 5.4e-63 245.4 261 59.4
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 2.0e-62 243.4 249 63.5
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 2.7e-62 243.0 252 60.7
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 3.5e-62 242.7 261 59.4
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 3.5e-62 242.7 263 56.7
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 5.9e-62 241.9 242 63.2
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 7.7e-62 241.5 266 56.8
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 1.3e-61 240.7 266 56.8
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.2e-61 240.0 262 58.0
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 5.0e-61 238.8 260 56.5
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 8.5e-61 238.0 251 59.0
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 1.1e-60 237.7 267 56.2
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 1.1e-60 237.7 229 64.2
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 1.5e-60 237.3 266 58.6
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 1.9e-60 236.9 257 59.1
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.2e-60 236.1 265 58.5
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 1.6e-59 233.8 265 57.7
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 2.1e-59 233.4 262 54.6
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 1.0e-58 231.1 242 61.6
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 1.0e-58 231.1 238 60.5
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 2.3e-58 229.9 263 59.3
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 4.0e-58 229.2 269 56.9
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 4.0e-58 229.2 269 56.9
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 4.0e-58 229.2 234 57.7
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 6.8e-58 228.4 263 53.6
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 1.5e-57 227.3 263 58.6
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 3.4e-57 226.1 239 60.7
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 4.4e-57 225.7 233 57.5
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.3e-56 224.2 262 53.4
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 1.7e-56 223.8 266 54.5
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 1.7e-56 223.8 256 53.5
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 2.8e-56 223.0 278 53.6
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 8.3e-56 221.5 240 56.7
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 8.3e-56 221.5 242 57.0
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 1.4e-55 220.7 262 51.5
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 2.7e-54 216.5 233 57.1
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 3.5e-54 216.1 241 56.4
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 5.9e-54 215.3 233 59.7
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 1.3e-53 214.2 241 55.2
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 5.0e-53 212.2 318 46.5
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 6.6e-53 211.8 239 57.3
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 8.6e-53 211.5 228 57.0
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 1.9e-52 210.3 248 56.5
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 4.2e-52 209.1 253 54.9
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 5.5e-52 208.8 227 58.1
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 5.5e-52 208.8 312 48.1
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 7.2e-52 208.4 255 54.9
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.6e-51 207.2 284 51.4
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 2.1e-51 206.8 284 51.4
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 3.6e-51 206.1 239 56.1
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 8.0e-51 204.9 284 51.1
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 1.8e-50 203.8 265 54.0
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 4.0e-50 202.6 242 55.0
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 5.2e-50 202.2 230 57.0
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 6.8e-50 201.8 206 60.7
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 2.0e-49 200.3 315 49.2
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 2.6e-49 199.9 242 55.4
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 2.6e-49 199.9 223 59.6
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 7.5e-49 198.4 188 66.5
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 4.9e-48 195.7 256 52.0
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 7.0e-47 191.8 246 50.4
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 7.0e-47 191.8 246 50.4
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 7.0e-47 191.8 237 51.1
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 1.6e-46 190.7 227 55.1
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 2.7e-46 189.9 227 55.5
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 2.7e-46 189.9 227 55.5
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 4.6e-46 189.1 243 49.4
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 7.8e-46 188.3 246 50.0
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 1.0e-45 188.0 243 49.8
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 2.3e-45 186.8 230 51.7
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 2.9e-45 186.4 256 48.4
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 5.0e-45 185.7 227 54.6
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 1.5e-44 184.1 238 50.8
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 1.9e-44 183.7 209 58.4
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 1.9e-44 183.7 249 48.6
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 3.3e-44 183.0 227 53.7
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 5.6e-44 182.2 259 47.1
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 9.5e-44 181.4 231 51.9
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 2.1e-43 180.3 243 51.4
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 2.3e-42 176.8 241 50.6
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 3.1e-42 176.4 235 51.9
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 5.2e-42 175.6 270 44.8
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 6.8e-42 175.3 279 45.9
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 1.5e-41 174.1 232 52.6
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 1.6e-38 164.1 123 74.0
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 6.0e-38 162.2 248 44.0
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 1.1e-34 151.4 235 47.7
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 5.2e-34 149.1 171 58.5
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 3.5e-30 136.3 271 39.1
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 7.8e-30 135.2 132 59.8
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 1.1e-26 124.8 127 59.1
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 3.9e-21 106.3 151 42.4
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 6.6e-21 105.5 256 34.8
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 1.5e-20 104.4 241 36.5
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 2.1e-19 100.5 221 39.4
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 2.1e-19 100.5 255 35.7
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 3.6e-19 99.8 127 46.5
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 5.6e-12 75.9 195 33.8
GSVIVG01017610001 Vitis vinifera HOM05D005991 ORTHO05D007408 9.9e-09 65.1 137 38.7
GSVIVG01017622001 Vitis vinifera HOM05D005991 ORTHO05D007408 6.4e-08 62.4 66 48.5
Sabra10G0116500 Salix brachista HOM05D005991 ORTHO05D007408 5.4e-07 59.3 114 40.4
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 7.9e-06 55.5 229 27.5


User provided reference genes

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