Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.1e-60 235.0 120 100.0
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.9e-31 138.3 121 69.4
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 7.0e-20 100.9 189 41.8
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 1.5e-17 93.2 73 69.9
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.3e-15 85.9 213 35.7
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 1.2e-14 83.6 119 52.1
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.8e-13 79.0 74 63.5
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.8e-13 79.0 119 46.2
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 3.7e-13 78.6 74 62.2
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.8e-13 78.2 120 46.7
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.8e-13 78.2 74 62.2
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 6.3e-13 77.8 73 61.6
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 1.1e-12 77.0 104 52.9
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 3.1e-12 75.5 128 46.1
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.4e-12 74.7 127 46.5
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 5.4e-12 74.7 127 46.5
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 9.1e-12 73.9 74 62.2
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 2.0e-11 72.8 73 60.3
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 7.7e-11 70.9 109 48.6
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 1.3e-10 70.1 73 52.1
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 2.3e-10 69.3 109 47.7
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 3.8e-10 68.6 98 46.9
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.2e-08 63.5 132 34.8
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 1.2e-08 63.5 132 34.8
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 1.2e-08 63.5 132 41.7
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 1.6e-08 63.2 86 47.7
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 3.6e-08 62.0 76 51.3
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 4.7e-08 61.6 73 50.7
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 8.0e-08 60.8 81 42.0
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 1.0e-07 60.5 79 46.8
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 1.0e-07 60.5 80 46.2
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.0e-07 60.5 115 37.4
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.0e-07 60.5 82 45.1
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.0e-07 60.5 82 45.1
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 1.0e-07 60.5 98 41.8
MSTRG.7356 Avicennia marina HOM05D007160 ORTHO05D005331 2.3e-07 59.3 110 43.6
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 2.3e-07 59.3 121 36.4
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 2.3e-07 59.3 98 41.8
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 3.0e-07 58.9 127 34.6
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 3.0e-07 58.9 81 46.9
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 3.0e-07 58.9 122 36.9
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 4.0e-07 58.5 117 37.6
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 5.2e-07 58.2 90 46.7
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 5.2e-07 58.2 79 50.6
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 1.2e-06 57.0 65 49.2
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 1.2e-06 57.0 76 47.4
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 2.0e-06 56.2 74 50.0
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 2.0e-06 56.2 76 43.4
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 2.0e-06 56.2 135 33.3
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 2.6e-06 55.8 80 51.2
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 7.5e-06 54.3 84 39.3
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 7.5e-06 54.3 78 46.2
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 9.8e-06 53.9 125 38.4
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 9.8e-06 53.9 118 40.7
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 9.8e-06 53.9 117 37.6
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 9.8e-06 53.9 115 38.3
SalBow7G0182 Salvia bowleyana HOM05D007160 ORTHO05D005331 9.8e-06 53.9 111 38.7
SalBow7G0780 Salvia bowleyana HOM05D007160 ORTHO05D005331 9.8e-06 53.9 111 38.7


User provided reference genes

Program Settings