Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003338g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.1e-42 173.3 88 100.0
Nitab4.5_0000785g0110 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.5e-14 80.9 46 78.3
Nitab4.5_0000316g0080 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.4e-14 80.1 46 76.1
Nitab4.5_0011168g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.2e-13 79.7 46 78.3
Nitab4.5_0000141g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-13 79.0 46 76.1
Nitab4.5_0000653g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.1e-13 79.0 48 72.9
Nitab4.5_0000213g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.7e-13 78.6 46 76.1
Nitab4.5_0008332g0050 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.4e-12 76.3 46 73.9
Nitab4.5_0000417g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-12 75.9 57 61.4
Nitab4.5_0000529g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-12 75.9 55 63.6
Nitab4.5_0000565g0250 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.8e-12 75.9 46 71.7
Nitab4.5_0016516g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 2.3e-12 75.5 45 73.3
Nitab4.5_0000092g0290 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.1e-12 74.3 45 73.3
Nitab4.5_0003022g0090 Nicotiana tabacum HOM05D003329 ORTHO05D006664 5.1e-12 74.3 46 71.7
Nitab4.5_0000682g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 6.7e-12 73.9 44 75.0
Nitab4.5_0000329g0190 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.8e-12 73.6 57 59.6
Nitab4.5_0000119g0270 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-11 73.2 57 59.6
Nitab4.5_0000128g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-11 73.2 57 59.6
Nitab4.5_0008974g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.1e-11 73.2 46 67.4
Nitab4.5_0001759g0100 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.3e-11 71.2 46 69.6
Nitab4.5_0000073g0200 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.7e-11 70.1 44 65.9
Nitab4.5_0000393g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.7e-11 70.1 45 66.7
Nitab4.5_0000381g0260 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-10 69.7 46 69.6
Nitab4.5_0002918g0120 Nicotiana tabacum HOM05D003329 ORTHO05D006664 1.3e-10 69.7 47 70.2
Nitab4.5_0001309g0060 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.7e-10 68.2 46 67.4
Nitab4.5_0001401g0220 Nicotiana tabacum HOM05D003329 ORTHO05D006664 8.2e-10 67.0 42 71.4
CAN.G229.35 Capsicum annuum HOM05D003329 ORTHO05D006664 1.4e-09 66.2 57 57.9
Nitab4.5_0002330g0170 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.1e-09 65.1 46 63.0
Nitab4.5_0002149g0020 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.1e-09 64.7 43 67.4
Nitab4.5_0005964g0030 Nicotiana tabacum HOM05D003329 ORTHO05D006664 9.1e-09 63.5 51 58.8
CAN.G208.4 Capsicum annuum HOM05D000201 ORTHO05D000490 1.2e-08 63.2 48 58.3
CAN.G78.125 Capsicum annuum HOM05D003329 ORTHO05D006664 5.9e-08 60.8 46 60.9
CAN.G264.22 Capsicum annuum HOM05D003329 ORTHO05D006664 7.7e-08 60.5 42 64.3
PGSC0003DMG401006646 Solanum tuberosum HOM05D003329 ORTHO05D006664 7.7e-08 60.5 46 56.5
PGSC0003DMG400002097 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.0e-07 60.1 46 58.7
Sopen05g011420 Solanum pennellii HOM05D003329 ORTHO05D006664 1.3e-07 59.7 46 58.7
Sopen07g022750 Solanum pennellii HOM05D003329 ORTHO05D006664 1.3e-07 59.7 46 58.7
PGSC0003DMG400029715 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.7e-07 59.3 46 58.7
PGSC0003DMG400036646 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.7e-07 59.3 46 58.7
Nitab4.5_0001696g0160 Nicotiana tabacum HOM05D003329 ORTHO05D006664 3.8e-07 58.2 34 76.5
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.5e-07 57.0 56 44.6
Peaxi162Scf01176g00135 Petunia axillaris HOM05D003329 ORTHO05D006664 1.4e-06 56.2 45 55.6
Peaxi162Scf00067g10116 Petunia axillaris HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
Peaxi162Scf00073g00225 Petunia axillaris HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
Peaxi162Scf00145g00105 Petunia axillaris HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
Peaxi162Scf00318g00410 Petunia axillaris HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
Peaxi162Scf00385g00063 Petunia axillaris HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
Peaxi162Scf00802g00124 Petunia axillaris HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
Peaxi162Scf04852g00001 Petunia axillaris HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
Solyc07g150124.1 Solanum lycopersicum HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 58.7
PGSC0003DMG400017907 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
PGSC0003DMG400022546 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
PGSC0003DMG400045983 Solanum tuberosum HOM05D003329 ORTHO05D006664 1.9e-06 55.8 46 54.3
Peaxi162Scf00351g00121 Petunia axillaris HOM05D003329 ORTHO05D001349 3.2e-06 55.1 48 52.1
Nitab4.5_0001573g0040 Nicotiana tabacum HOM05D003329 ORTHO05D006664 4.2e-06 54.7 51 54.9
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 4.2e-06 54.7 51 41.2
Peaxi162Scf00802g00125 Petunia axillaris HOM05D003329 ORTHO05D006664 5.5e-06 54.3 45 53.3
Peaxi162Scf00884g00022 Petunia axillaris HOM05D003329 ORTHO05D006664 5.5e-06 54.3 46 52.2
PGSC0003DMG400008529 Solanum tuberosum HOM05D003329 ORTHO05D006664 5.5e-06 54.3 46 52.2
PGSC0003DMG400044748 Solanum tuberosum HOM05D003329 ORTHO05D006664 5.5e-06 54.3 43 55.8
PGSC0003DMG400027290 Solanum tuberosum HOM05D000017 ORTHO05D013101 7.2e-06 53.9 51 41.2


User provided reference genes

Program Settings