Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003336g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-69 266.5 144 100.0
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-47 193.4 198 61.6
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.0e-47 190.7 171 66.1
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-46 189.5 199 58.8
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-45 186.8 151 72.8
Nitab4.5_0000101g0410 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-44 182.2 169 64.5
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.0e-43 177.6 197 57.9
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-42 176.8 184 58.7
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-42 176.4 171 63.2
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-42 176.0 198 57.1
Nitab4.5_0000030g0290 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.6e-41 171.0 155 65.2
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.6e-41 170.6 198 57.6
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-40 169.9 198 56.1
Nitab4.5_0000008g0340 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-40 168.7 151 65.6
Nitab4.5_0002823g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-40 168.7 175 59.4
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-40 168.3 183 57.9
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-39 166.4 181 58.6
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-38 163.3 139 68.3
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-38 162.2 198 54.5
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-38 161.8 193 55.4
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-37 159.1 193 55.4
Nitab4.5_0000304g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.3e-36 154.1 176 58.0
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-35 151.4 198 51.5
Nitab4.5_0000491g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.2e-35 150.6 180 55.6
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-34 149.4 192 53.1
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-34 149.4 196 51.5
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-34 148.3 182 51.6
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-34 147.9 181 55.2
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.8e-34 147.5 198 52.0
Nitab4.5_0000030g0180 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-33 147.1 139 60.4
Nitab4.5_0000722g0130 Nicotiana tabacum HOM05D003911 ORTHO05D010997 3.0e-33 145.6 101 81.2
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.6e-33 144.1 181 55.2
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-32 142.5 177 54.2
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-32 141.0 173 52.6
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-31 140.2 165 56.4
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-31 139.4 180 50.6
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-31 138.3 183 51.4
Nitab4.5_0007170g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-30 137.1 90 86.7
Nitab4.5_0009953g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-30 136.7 101 77.2
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-30 135.6 162 54.9
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.9e-30 134.0 90 84.4
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-27 126.3 90 78.9
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-27 125.6 165 53.3
Nitab4.5_0004620g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-26 122.9 168 51.8
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-25 119.0 86 79.1
Nitab4.5_0000169g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-24 115.2 164 48.2
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 2.1e-23 112.8 196 38.8
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-23 112.8 156 48.1
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-23 111.3 157 51.0
Nitab4.5_0007746g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-23 110.9 85 76.5
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-22 109.8 88 73.9
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-22 109.4 179 46.4
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.2e-22 108.2 149 49.0
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-21 105.5 154 51.3
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-21 105.5 175 45.1
Nitab4.5_0002311g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-21 104.8 170 42.9
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-21 104.4 142 50.7
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-20 100.9 90 70.0
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-19 98.6 137 47.4
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-18 96.3 172 41.9
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 4.6e-18 95.1 184 35.9
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-18 94.7 136 47.8
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-17 94.0 100 55.0
Nitab4.5_0000199g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-17 93.2 71 77.5
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-17 93.2 164 39.6
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-17 92.8 59 83.1
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-17 90.9 169 39.6
Nitab4.5_0003185g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-16 90.5 81 64.2
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-16 90.5 199 35.2
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-16 89.0 100 55.0
Nitab4.5_0000865g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-16 88.2 72 70.8
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 2.8e-15 85.9 190 32.1
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.8e-15 85.9 93 52.7
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.8e-15 85.9 128 46.9
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-15 85.5 200 34.0
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.6e-15 85.5 195 34.9
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-15 85.1 200 34.5
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.8e-15 85.1 99 53.5
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-15 84.7 106 54.7
Nitab4.5_0003768g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-15 84.3 59 81.4
Nitab4.5_0005121g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-15 84.3 70 68.6
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 1.1e-14 84.0 200 34.5
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.8e-14 83.2 158 43.0
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-14 82.8 201 34.3
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.9e-14 81.3 201 32.3
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-13 79.7 98 52.0
Nitab4.5_0002999g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-13 79.7 116 48.3
CAN.G141.3 Capsicum annuum HOM05D003911 ORTHO05D002175 3.4e-13 79.0 93 49.5
CAN.G1622.3 Capsicum annuum HOM05D003911 ORTHO05D002175 3.4e-13 79.0 88 54.5
CAN.G168.3 Capsicum annuum HOM05D003911 ORTHO05D002175 4.5e-13 78.6 88 52.3
Sopen06g006900 Solanum pennellii HOM05D003911 ORTHO05D002175 9.9e-13 77.4 81 53.1
CAN.G602.4 Capsicum annuum HOM05D003911 ORTHO05D002175 2.9e-12 75.9 90 50.0
Nitab4.5_0000481g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-12 75.1 48 79.2
Nitab4.5_0007170g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.9e-12 75.1 44 84.1
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 8.4e-12 74.3 183 32.8
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-11 73.6 158 36.1
Nitab4.5_0000003g0850 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-11 73.2 55 70.9
CAN.G686.12 Capsicum annuum HOM05D003911 ORTHO05D002175 2.4e-11 72.8 100 48.0
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 4.2e-11 72.0 156 33.3
Nitab4.5_0005978g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-11 72.0 51 84.3
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.4e-11 71.6 168 35.7
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-11 70.9 122 45.1
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-10 70.5 172 30.8
CAN.G47.7 Capsicum annuum HOM05D003911 ORTHO05D002175 1.6e-10 70.1 78 51.3
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-10 69.7 180 30.6
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.1e-10 69.7 161 34.2
Nitab4.5_0001859g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-10 68.9 44 77.3
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-10 68.6 191 31.9
CAN.G1243.2 Capsicum annuum HOM05D003911 ORTHO05D002175 6.0e-10 68.2 72 56.9
CAN.G2762.1 Capsicum annuum HOM05D003911 ORTHO05D002175 6.0e-10 68.2 72 56.9
Nitab4.5_0011788g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-09 67.0 44 75.0
Solyc12g038730.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.8e-09 66.6 69 56.5
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 3.0e-09 65.9 206 28.2
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 6.7e-09 64.7 78 48.7
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-08 63.9 186 29.0
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-08 63.5 82 43.9
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-08 63.2 105 41.0
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.9e-08 63.2 206 27.2
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.9e-08 63.2 206 27.7
CAN.G643.10 Capsicum annuum HOM05D003911 ORTHO05D002175 2.5e-08 62.8 122 36.1
Solyc10g038140.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 3.3e-08 62.4 63 54.0
CAN.G19.1 Capsicum annuum HOM05D000703 ORTHO05D026988 4.3e-08 62.0 71 50.7
CAN.G1130.7 Capsicum annuum HOM05D000995 ORTHO05D001773 5.6e-08 61.6 94 41.5
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.6e-08 61.6 167 30.5
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 7.4e-08 61.2 97 40.2
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-07 60.1 206 26.7
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-07 59.7 206 27.2
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-07 59.7 185 30.8
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.8e-07 58.5 97 38.1
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-07 57.8 129 41.1
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 8.1e-07 57.8 97 40.2
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 2.4e-06 56.2 116 37.1
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.4e-06 56.2 97 38.1
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 3.1e-06 55.8 206 26.2
Nitab4.5_0006058g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-06 55.5 33 84.8
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 5.3e-06 55.1 97 38.1
Sopen09g011440 Solanum pennellii HOM05D003911 ORTHO05D002175 9.0e-06 54.3 49 51.0


User provided reference genes

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