Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-166 589.3 290 100.0
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 3.4e-153 545.0 266 97.4
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 5.6e-124 448.0 266 78.9
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 2.8e-123 445.7 266 78.9
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 1.2e-113 413.7 251 77.7
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 7.6e-113 411.0 263 74.5
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 4.9e-112 408.3 266 74.4
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 7.6e-105 384.4 267 65.2
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 1.1e-103 380.6 267 65.5
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 3.0e-101 372.5 267 63.3
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 1.4e-98 363.6 267 62.2
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 1.4e-98 363.6 267 63.7
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 6.9e-98 361.3 267 62.9
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 2.2e-96 356.3 266 61.3
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 2.9e-96 355.9 264 64.0
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 8.5e-96 354.4 289 59.9
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 9.4e-95 350.9 269 61.0
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 3.9e-93 345.5 268 60.8
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.1e-93 345.1 287 64.5
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 5.1e-93 345.1 271 61.3
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 1.5e-92 343.6 268 61.6
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 1.5e-92 343.6 267 60.7
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 2.0e-92 343.2 268 60.1
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 3.3e-92 342.4 268 60.1
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 5.7e-92 341.7 299 55.5
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 9.7e-92 340.9 266 60.9
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 9.7e-92 340.9 268 61.6
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 1.7e-91 340.1 285 56.8
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 1.4e-90 337.0 266 59.8
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 9.1e-90 334.3 285 56.1
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.5e-89 333.6 275 58.9
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 2.0e-89 333.2 268 59.0
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 2.0e-89 333.2 268 61.2
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 2.6e-89 332.8 270 59.6
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 3.4e-89 332.4 268 58.6
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 2.9e-88 329.3 267 59.6
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 2.9e-88 329.3 267 60.3
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 3.8e-88 328.9 266 59.8
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 5.0e-88 328.6 266 59.0
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 6.5e-88 328.2 267 59.2
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 6.5e-88 328.2 281 56.9
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 6.5e-88 328.2 267 58.1
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 8.5e-88 327.8 266 59.4
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.1e-87 327.4 268 59.0
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 4.2e-87 325.5 269 57.2
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.2e-87 325.5 265 58.5
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 5.5e-87 325.1 266 59.4
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 5.5e-87 325.1 266 60.2
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 1.2e-86 323.9 267 57.3
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 2.7e-86 322.8 267 58.1
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 3.6e-86 322.4 266 59.0
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 6.1e-86 321.6 262 55.7
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 7.9e-86 321.2 265 57.7
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 7.9e-86 321.2 260 58.1
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 3.0e-85 319.3 257 61.1
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 5.2e-85 318.5 240 60.8
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 2.6e-84 316.2 270 57.8
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 2.6e-84 316.2 270 56.7
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 5.7e-84 315.1 268 56.7
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 7.4e-84 314.7 268 56.7
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 7.4e-84 314.7 260 56.9
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 7.4e-84 314.7 268 56.7
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 1.3e-83 313.9 260 57.3
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.3e-83 313.9 260 57.3
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 2.2e-83 313.2 266 56.8
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 2.8e-83 312.8 264 57.6
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 2.8e-83 312.8 267 55.4
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 4.8e-83 312.0 269 56.5
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 4.8e-83 312.0 260 57.3
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 4.8e-83 312.0 260 57.3
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 4.8e-83 312.0 269 56.5
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 6.3e-83 311.6 281 54.8
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 6.3e-83 311.6 262 57.3
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 8.2e-83 311.2 265 55.8
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 1.1e-82 310.8 253 58.5
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 1.8e-82 310.1 290 53.1
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 4.1e-82 308.9 270 54.4
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 5.3e-82 308.5 260 56.9
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 5.3e-82 308.5 269 55.4
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 5.3e-82 308.5 269 55.4
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 7.0e-82 308.1 265 56.2
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 2.6e-81 306.2 269 54.6
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 3.5e-81 305.8 268 56.7
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 7.7e-81 304.7 304 50.3
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 8.5e-80 301.2 248 57.7
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 2.7e-78 296.2 269 53.5
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 8.0e-78 294.7 236 58.1
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 4.0e-77 292.4 268 52.2
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 6.7e-77 291.6 265 51.7
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 2.6e-76 289.7 261 55.6
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 4.4e-76 288.9 276 51.4
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 9.7e-76 287.7 271 53.1
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.4e-74 283.9 253 53.8
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 1.6e-73 280.4 252 54.8
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 4.5e-73 278.9 223 60.1
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 1.0e-72 277.7 270 50.7
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 5.0e-72 275.4 268 49.6
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 2.5e-71 273.1 268 49.3
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 2.7e-70 269.6 217 56.7
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 3.6e-70 269.2 237 56.1
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 1.0e-69 267.7 268 51.5
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 1.3e-67 260.8 252 53.6
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 2.9e-64 249.6 258 45.3
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 3.2e-63 246.1 255 48.6
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 3.2e-63 246.1 266 44.4
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 2.1e-62 243.4 270 43.0
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 4.7e-62 242.3 195 56.9
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 2.6e-60 236.5 333 39.0
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 9.8e-60 234.6 293 40.3
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 8.3e-59 231.5 265 44.9
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.9e-55 220.3 219 52.5
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.9e-55 220.3 219 52.5
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 3.3e-55 219.5 275 41.1
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 4.3e-55 219.2 195 52.8
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.6e-52 209.9 219 50.2
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.9e-51 206.5 219 49.8
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.7e-49 199.9 220 46.4
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 6.2e-46 188.7 249 42.2
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 4.9e-43 179.1 199 45.2
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 3.0e-40 169.9 113 67.3
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.1e-39 167.9 418 26.3
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 1.5e-39 167.5 210 42.4
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 5.6e-39 165.6 281 34.5
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 8.1e-38 161.8 147 57.1
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 8.3e-35 151.8 161 46.6
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-33 147.5 103 68.9
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 7.8e-33 145.2 304 30.3
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 1.7e-32 144.1 161 44.1
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 8.6e-32 141.7 383 28.2
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 1.2e-30 137.9 137 51.8
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 3.4e-28 129.8 100 61.0
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 1.7e-27 127.5 126 54.0
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 2.2e-27 127.1 355 28.5
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 1.7e-24 117.5 154 40.9
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.1e-21 108.2 55 83.6
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.1e-21 108.2 57 86.0
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 1.4e-21 107.8 154 36.4
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 4.9e-19 99.4 53 81.1
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 7.1e-18 95.5 140 41.4
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 4.6e-17 92.8 57 73.7
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.4e-13 81.3 168 33.9
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 3.2e-10 70.1 63 52.4
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 1.0e-08 65.1 40 67.5
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 2.3e-08 63.9 38 68.4
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 2.3e-08 63.9 38 65.8
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 5.1e-08 62.8 29 93.1
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 9.6e-07 58.5 32 71.9


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