Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 2.0e-32 141.7 68 100.0
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 2.1e-21 105.1 64 81.2
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 3.8e-15 84.3 63 66.7
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 1.2e-13 79.3 63 65.1
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 2.1e-13 78.6 63 61.9
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 8.0e-13 76.6 56 64.3
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 1.8e-12 75.5 67 53.7
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 2.6e-11 71.6 64 57.8
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 2.6e-11 71.6 53 64.2
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 7.5e-11 70.1 56 62.5
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 9.8e-11 69.7 64 57.8
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 1.3e-10 69.3 53 58.5
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 1.3e-10 69.3 59 59.3
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 3.7e-10 67.8 68 54.4
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 3.7e-10 67.8 55 67.3
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 4.8e-10 67.4 68 51.5
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 6.3e-10 67.0 53 64.2
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 2.4e-09 65.1 63 50.8
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 5.4e-09 63.9 55 56.4
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 5.4e-09 63.9 53 60.4
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.6e-08 62.4 73 50.7
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.0e-08 62.0 63 46.0
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 2.7e-08 61.6 73 50.7
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 3.5e-08 61.2 60 53.3
Migut.E00334 Erythranthe guttata HOM05D008456 ORTHO05D010229 4.5e-08 60.8 54 57.4
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 4.5e-08 60.8 60 53.3
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 1.0e-07 59.7 74 44.6
Oeu014305.1 Olea europaea HOM05D000497 ORTHO05D002300 1.3e-07 59.3 46 60.9
Manes.06G069000 Manihot esculenta HOM05D008456 ORTHO05D010229 2.3e-07 58.5 47 57.4
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.9e-07 58.2 63 44.4
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.9e-07 58.2 53 54.7
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 2.9e-07 58.2 63 44.4
HanXRQChr16g0529291 Helianthus annuus HOM05D008456 ORTHO05D010229 2.9e-07 58.2 49 53.1
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 5.0e-07 57.4 69 44.9
unitig_22.g5569 Utricularia gibba HOM05D008456 ORTHO05D010229 5.0e-07 57.4 54 51.9
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 8.6e-07 56.6 66 47.0
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 1.5e-06 55.8 38 60.5
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 2.5e-06 55.1 67 44.8


User provided reference genes

Program Settings