Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003330g0020 Nicotiana tabacum HOM05D007913 ORTHO05D009599 4.0e-55 218.0 121 100.0
Nitab4.5_0000874g0150 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.3e-45 186.4 121 82.6
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 6.4e-29 131.0 118 61.0
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.6e-27 126.3 119 59.7
Peaxi162Scf00382g00033 Petunia axillaris HOM05D007913 ORTHO05D009599 3.1e-23 112.1 116 54.3
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 1.7e-21 106.3 118 51.7
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 6.4e-21 104.4 118 51.7
Peaxi162Scf00382g00026 Petunia axillaris HOM05D007913 ORTHO05D009599 1.4e-20 103.2 117 53.0
Cc00_g12370 Coffea canephora HOM05D007913 ORTHO05D009599 9.5e-17 90.5 124 46.0
Nitab4.5_0000057g0320 Nicotiana tabacum HOM05D007913 ORTHO05D009599 6.2e-16 87.8 119 50.4
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 4.4e-14 81.6 121 42.1
QL01p043366 Quercus lobata HOM05D007913 ORTHO05D009599 5.8e-14 81.3 118 44.1
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 7.5e-14 80.9 122 40.2
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 4.9e-13 78.2 115 41.7
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 5.4e-12 74.7 119 42.9
Nitab4.5_0005939g0010 Nicotiana tabacum HOM05D007913 ORTHO05D009599 7.1e-12 74.3 101 48.5
Nitab4.5_0006400g0040 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.2e-11 73.6 75 53.3
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.1e-11 72.8 119 42.0
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 4.6e-11 71.6 117 41.0
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 6.0e-11 71.2 122 39.3
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 1.3e-10 70.1 130 38.5
Oeu027679.1 Olea europaea HOM05D007913 ORTHO05D009599 1.7e-10 69.7 122 39.3
Oeu027681.1 Olea europaea HOM05D007913 ORTHO05D009599 1.7e-10 69.7 122 39.3
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 3.0e-10 68.9 123 36.6
Nn4g23816 Nelumbo nucifera HOM05D007913 ORTHO05D009599 3.9e-10 68.6 126 37.3
Actinidia18937 Actinidia chinensis HOM05D010627 ORTHO05D009599 1.5e-09 66.6 107 42.1
Duzib268G1152 Durio zibethinus HOM05D013794 ORTHO05D009599 1.5e-09 66.6 118 38.1
Oeu009783.1 Olea europaea HOM05D007913 ORTHO05D009599 1.5e-09 66.6 117 40.2
Cfa000683 Carpinus fangiana HOM05D007913 ORTHO05D009599 1.9e-09 66.2 117 39.3
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 1.9e-09 66.2 77 46.8
Dinv21098 Davidia involucrata HOM05D007913 ORTHO05D009599 4.3e-09 65.1 108 45.4
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 2.1e-08 62.8 121 39.7
Thecc.02G356200 Theobroma cacao HOM05D007913 ORTHO05D009599 2.8e-08 62.4 120 37.5
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 3.6e-08 62.0 119 37.0
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 6.2e-08 61.2 140 34.3
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 6.2e-08 61.2 124 38.7
Aqoxy3G00317 Aquilegia oxysepala HOM05D007913 ORTHO05D009599 1.1e-07 60.5 122 36.1
Prupe.1G309800 Prunus persica HOM05D007913 ORTHO05D009599 1.1e-07 60.5 123 35.8
MSTRG.2240 Avicennia marina HOM05D007913 ORTHO05D009599 1.4e-07 60.1 119 35.3
SalBow8G2445 Salvia bowleyana HOM05D007913 ORTHO05D009599 1.4e-07 60.1 114 36.8
RcHm_v2.0_Chr4g0435341 Rosa chinensis HOM05D007913 ORTHO05D009599 1.8e-07 59.7 117 35.0
Atru.chr11.1275 Acer truncatum HOM05D007913 ORTHO05D009599 2.3e-07 59.3 118 38.1
MSTRG.13522 Avicennia marina HOM05D007913 ORTHO05D009599 3.1e-07 58.9 115 33.9
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 3.1e-07 58.9 117 33.3
Nitab4.5_0001602g0040 Nicotiana tabacum HOM05D000411 ORTHO05D000310 3.1e-07 58.9 31 93.5
Sabra08G0090900 Salix brachista HOM05D013794 ORTHO05D009599 3.1e-07 58.9 122 37.7
MSTRG.2241 Avicennia marina HOM05D007913 ORTHO05D009599 4.0e-07 58.5 118 34.7
Potri.010G125900 Populus trichocarpa HOM05D007913 ORTHO05D009599 5.2e-07 58.2 123 35.0
Actinidia35085 Actinidia chinensis HOM05D010627 ORTHO05D013125 6.8e-07 57.8 125 34.4
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 6.8e-07 57.8 117 38.5
Atru.chr11.1276 Acer truncatum HOM05D007913 ORTHO05D009599 2.0e-06 56.2 116 33.6
Nn3g17821 Nelumbo nucifera HOM05D007913 ORTHO05D009599 2.0e-06 56.2 121 36.4
Peaxi162Scf00382g00032 Petunia axillaris HOM05D016979 ORTHO05D016853 2.0e-06 56.2 76 44.7
vmacro23289 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 2.0e-06 56.2 121 35.5
MSTRG.13526 Avicennia marina HOM05D007913 ORTHO05D009599 2.6e-06 55.8 104 32.7
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 2.6e-06 55.8 118 32.2
FvH4_4g27520 Fragaria vesca HOM05D007913 ORTHO05D009599 4.4e-06 55.1 117 34.2
FAN12G2484 Fragaria x ananassa HOM05D007913 ORTHO05D009599 4.4e-06 55.1 117 34.2
FAN12G3451 Fragaria x ananassa HOM05D007913 ORTHO05D009599 4.4e-06 55.1 117 34.2
MD13G1042800 Malus domestica HOM05D007913 ORTHO05D009599 5.8e-06 54.7 117 31.6
vmacro16450 Vaccinium macrocarpon HOM05D010627 ORTHO05D009599 5.8e-06 54.7 118 37.3
Eucgr.G02329 Eucalyptus grandis HOM05D007913 ORTHO05D009599 7.6e-06 54.3 118 33.1
Hma1.2p1_1001F.1_g246480 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 9.9e-06 53.9 75 45.3


User provided reference genes

Program Settings