Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 6.4e-94 347.4 180 100.0
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 2.0e-55 219.5 123 95.9
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 5.3e-48 194.9 134 79.1
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 5.0e-46 188.3 135 76.3
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 2.1e-36 156.4 123 72.4
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.4e-35 153.7 123 71.5
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 7.5e-34 147.9 139 67.6
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 1.1e-32 144.1 125 65.6
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 4.5e-31 138.7 139 66.2
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 1.3e-30 137.1 134 59.0
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 2.9e-30 136.0 131 58.0
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 6.5e-30 134.8 132 58.3
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.1e-29 134.0 134 57.5
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 1.1e-29 134.0 134 57.5
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 2.5e-29 132.9 134 56.7
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 5.5e-29 131.7 135 57.0
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 7.2e-29 131.3 109 67.9
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.2e-28 130.6 112 61.6
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.6e-28 130.2 139 55.4
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 2.1e-28 129.8 130 56.2
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 4.7e-28 128.6 116 60.3
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 4.7e-28 128.6 98 71.4
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 4.7e-28 128.6 130 55.4
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 6.1e-28 128.3 87 77.0
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.1e-28 128.3 87 77.0
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 1.0e-27 127.5 88 75.0
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.0e-27 127.5 129 56.6
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 1.8e-27 126.7 87 75.9
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 1.8e-27 126.7 87 74.7
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 2.3e-27 126.3 97 70.1
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 2.3e-27 126.3 98 70.4
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 3.0e-27 125.9 98 67.3
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 6.8e-27 124.8 87 73.6
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 1.5e-26 123.6 102 62.7
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 2.0e-26 123.2 100 69.0
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 2.0e-26 123.2 102 62.7
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 2.0e-26 123.2 101 66.3
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 2.6e-26 122.9 124 58.1
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 4.4e-26 122.1 102 74.5
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 5.7e-26 121.7 135 54.8
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 7.5e-26 121.3 92 71.7
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 7.5e-26 121.3 102 61.8
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 9.8e-26 120.9 135 54.8
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 1.3e-25 120.6 98 65.3
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 1.7e-25 120.2 100 63.0
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.7e-25 120.2 134 53.0
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 1.7e-25 120.2 131 51.9
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 2.2e-25 119.8 87 74.7
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 2.2e-25 119.8 122 59.0
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 2.8e-25 119.4 135 56.3
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 2.8e-25 119.4 98 65.3
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 3.7e-25 119.0 99 66.7
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 3.7e-25 119.0 99 66.7
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 3.7e-25 119.0 99 66.7
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 3.7e-25 119.0 99 66.7
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 3.7e-25 119.0 99 66.7
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 3.7e-25 119.0 85 75.3
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 4.9e-25 118.6 86 70.9
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 4.9e-25 118.6 91 64.8
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 6.3e-25 118.2 90 68.9
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 1.1e-24 117.5 99 66.7
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 1.4e-24 117.1 87 69.0
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 1.8e-24 116.7 87 67.8
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 4.1e-24 115.5 85 74.1
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 7.0e-24 114.8 139 48.9
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 1.6e-23 113.6 135 53.3
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 1.6e-23 113.6 86 65.1
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 2.0e-23 113.2 98 68.4
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 2.0e-23 113.2 88 68.2
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 7.8e-23 111.3 74 71.6
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 1.0e-22 110.9 105 61.9
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.7e-22 110.2 87 62.1
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 2.3e-22 109.8 101 60.4
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 2.3e-22 109.8 100 59.0
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 3.8e-22 109.0 110 60.9
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 8.6e-22 107.8 85 64.7
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 2.5e-21 106.3 103 60.2
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 7.3e-21 104.8 137 49.6
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 9.5e-21 104.4 91 61.5
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 4.7e-20 102.1 109 56.0
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 8.0e-20 101.3 109 56.0
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 1.4e-19 100.5 86 59.3
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 1.8e-19 100.1 98 54.1
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 2.3e-19 99.8 124 45.2
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 3.0e-19 99.4 93 57.0
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 4.0e-19 99.0 114 48.2
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 7.5e-18 94.7 133 48.1
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 7.5e-18 94.7 125 48.8
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 2.9e-17 92.8 153 40.5
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 6.4e-17 91.7 139 41.0
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 2.4e-16 89.7 67 62.7
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 1.2e-15 87.4 98 54.1
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 9.5e-13 77.8 83 53.0
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 4.7e-12 75.5 50 66.0
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 1.8e-11 73.6 88 46.6
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 1.2e-10 70.9 85 49.4
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 5.8e-10 68.6 99 40.4
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 1.3e-09 67.4 92 44.6
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 1.1e-08 64.3 45 57.8
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 2.0e-07 60.1 60 55.0


User provided reference genes

Program Settings