Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003324g0110 Nicotiana tabacum HOM05D006913 ORTHO05D008720 9.7e-113 410.2 216 100.0
Nitab4.5_0000363g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.5e-110 402.9 216 97.2
Solyc06g009400.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.2e-80 302.8 219 78.1
PGSC0003DMG400007277 Solanum tuberosum HOM05D006913 ORTHO05D008720 8.3e-80 300.8 218 77.1
Sopen06g004130 Solanum pennellii HOM05D006913 ORTHO05D008720 5.4e-79 298.1 219 77.2
Peaxi162Scf00058g00218 Petunia axillaris HOM05D006913 ORTHO05D008720 1.8e-74 283.1 214 76.2
Nitab4.5_0000222g0190 Nicotiana tabacum HOM05D006913 ORTHO05D008720 1.8e-66 256.5 215 69.3
CAN.G1280.40 Capsicum annuum HOM05D006913 ORTHO05D008720 3.1e-66 255.8 206 71.4
Migut.D00043 Erythranthe guttata HOM05D006913 ORTHO05D008720 1.5e-65 253.4 218 66.5
Haze_05096 Corylus avellana HOM05D006913 ORTHO05D008720 9.8e-65 250.8 197 69.0
Dinv12109 Davidia involucrata HOM05D006913 ORTHO05D008720 4.9e-64 248.4 199 69.8
Cfa004859 Carpinus fangiana HOM05D006913 ORTHO05D008720 6.4e-64 248.1 197 67.5
Thecc.01G320200 Theobroma cacao HOM05D006913 ORTHO05D008720 1.9e-63 246.5 212 65.1
Manes.01G231800 Manihot esculenta HOM05D006913 ORTHO05D008720 5.4e-63 245.0 201 66.2
TAR362G1022 Trochodendron aralioides HOM05D006913 ORTHO05D008720 5.4e-63 245.0 176 73.9
GSVIVG01028181001 Vitis vinifera HOM05D006913 ORTHO05D008720 5.4e-63 245.0 201 69.2
Duzib138G1774 Durio zibethinus HOM05D006913 ORTHO05D008720 2.0e-62 243.0 200 68.5
MSTRG.21716 Avicennia marina HOM05D006913 ORTHO05D008720 2.7e-62 242.7 218 65.1
Hma1.2p1_0408F.1_g146440 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 4.6e-62 241.9 218 63.8
TWI59G1195 Tripterygium wilfordii HOM05D006913 ORTHO05D008720 4.6e-62 241.9 195 67.2
CSS0007691 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.3e-61 240.4 164 75.0
Ciclev10022378m.g Citrus clementina HOM05D006913 ORTHO05D008720 3.9e-61 238.8 209 66.0
Prupe.3G005300 Prunus persica HOM05D006913 ORTHO05D008720 6.6e-61 238.0 210 64.3
Dinv33147 Davidia involucrata HOM05D006913 ORTHO05D008720 1.5e-60 236.9 189 69.3
FvH4_1g26590 Fragaria vesca HOM05D006913 ORTHO05D008720 1.5e-60 236.9 192 65.6
SalBow3G0392 Salvia bowleyana HOM05D006913 ORTHO05D008720 1.5e-60 236.9 216 62.5
CSS0013168 Camellia sinensis var. sinensis HOM05D006913 ORTHO05D008720 1.9e-60 236.5 214 64.0
QL12p018506 Quercus lobata HOM05D006913 ORTHO05D008720 3.3e-60 235.7 211 64.5
FAN28G1862 Fragaria x ananassa HOM05D006913 ORTHO05D008720 4.3e-60 235.3 192 65.6
PSO724G1078 Papaver somniferum HOM05D006913 ORTHO05D008720 7.3e-60 234.6 201 62.7
PSO170G2504 Papaver somniferum HOM05D006913 ORTHO05D008720 1.2e-59 233.8 168 70.8
CiPaw.07G121500 Carya illinoinensis HOM05D006913 ORTHO05D008720 1.6e-59 233.4 214 63.6
FAN19G0677 Fragaria x ananassa HOM05D006913 ORTHO05D008720 4.7e-59 231.9 210 60.5
RcHm_v2.0_Chr3g0486731 Rosa chinensis HOM05D006913 ORTHO05D008720 6.2e-59 231.5 196 64.8
FAN26G0114 Fragaria x ananassa HOM05D006913 ORTHO05D008720 8.1e-59 231.1 210 60.5
Aqoxy5G02741 Aquilegia oxysepala HOM05D006913 ORTHO05D008720 3.1e-58 229.2 213 62.0
Sed0008492 Sechium edule HOM05D006913 ORTHO05D008720 4.0e-58 228.8 193 64.8
MD17G1280100 Malus domestica HOM05D006913 ORTHO05D008720 8.9e-58 227.6 194 63.4
MD09G1287900 Malus domestica HOM05D006913 ORTHO05D008720 1.2e-57 227.3 213 62.0
Atru.chr5.924 Acer truncatum HOM05D006913 ORTHO05D008720 1.5e-57 226.9 202 64.9
Rhsim01G0292800 Rhododendron simsii HOM05D006913 ORTHO05D008720 1.5e-57 226.9 209 63.2
ATR0693G068 Amborella trichopoda HOM05D006913 ORTHO05D008720 3.4e-57 225.7 160 73.8
ClCG09G004810 Citrullus lanatus HOM05D006913 ORTHO05D008720 3.4e-57 225.7 212 61.3
Nn3g21840 Nelumbo nucifera HOM05D006913 ORTHO05D008720 4.4e-57 225.3 201 64.2
arahy.Tifrunner.gnm1.ann1.6PPK8V Arachis hypogaea HOM05D006913 ORTHO05D008720 5.8e-57 224.9 204 62.7
MBI18_g11536_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 9.8e-57 224.2 214 61.7
Glyma.19G219300 Glycine max HOM05D006913 ORTHO05D008720 1.3e-56 223.8 168 70.2
MBI18_g09652_MAGBIO Magnolia biondii HOM05D006913 ORTHO05D008720 1.7e-56 223.4 213 61.0
Potri.002G191300 Populus trichocarpa HOM05D006913 ORTHO05D008720 1.7e-56 223.4 216 61.1
Cpa.g.c29544.2 Carica papaya HOM05D006913 ORTHO05D008720 6.4e-56 221.5 207 58.0
Glyma.03G222100 Glycine max HOM05D006913 ORTHO05D008720 1.1e-55 220.7 173 69.4
THA.LOC104801315 Tarenaya hassleriana HOM05D006913 ORTHO05D008720 1.9e-55 219.9 170 67.6
Sed0005932 Sechium edule HOM05D006913 ORTHO05D008720 4.1e-55 218.8 191 63.9
TPR.G4038 Trifolium pratense HOM05D006913 ORTHO05D008720 4.1e-55 218.8 159 71.7
PGR083G1650 Punica granatum HOM05D006913 ORTHO05D008720 5.4e-55 218.4 225 57.3
VMungo1383G0882 Vigna mungo HOM05D006913 ORTHO05D008720 9.2e-55 217.6 168 67.9
MELO3C023629.2 Cucumis melo HOM05D006913 ORTHO05D008720 2.1e-54 216.5 159 71.1
Medtr7g109970 Medicago truncatula HOM05D006913 ORTHO05D008720 2.1e-54 216.5 166 68.7
HPP92_002654 Vanilla planifolia HOM05D006913 ORTHO05D008720 2.7e-54 216.1 211 58.8
Lj1g0024926 Lotus japonicus HOM05D006913 ORTHO05D008720 3.5e-54 215.7 169 69.8
Carub.0006s3531 Capsella rubella HOM05D006913 ORTHO05D008720 6.0e-54 214.9 159 68.6
CsaV3_7G030270 Cucumis sativus L. HOM05D006913 ORTHO05D008720 6.0e-54 214.9 159 70.4
Sc05g0000220 Simmondsia chinensis HOM05D006913 ORTHO05D008720 7.8e-54 214.5 210 58.1
AT4G01900 Arabidopsis thaliana HOM05D006913 ORTHO05D008720 1.0e-53 214.2 152 71.7
Lalb_Chr04g0260061 Lupinus albus HOM05D006913 ORTHO05D008720 1.0e-53 214.2 164 69.5
unitig_578.g16634 Utricularia gibba HOM05D006913 ORTHO05D008720 1.7e-53 213.4 167 67.7
AL6G51370 Arabidopsis lyrata HOM05D006913 ORTHO05D008720 2.3e-53 213.0 152 71.1
Sp6g01770 Schrenkiella parvula HOM05D006913 ORTHO05D008720 5.1e-53 211.8 181 64.6
CDE11G0810 Ceratophyllum demersum HOM05D006913 ORTHO05D008720 1.5e-52 210.3 215 56.3
BcaB01g02398 Brassica carinata HOM05D006913 ORTHO05D008720 4.3e-52 208.8 181 63.5
Psat3g018680 Pisum sativum HOM05D006913 ORTHO05D008720 1.2e-51 207.2 161 68.3
Thhalv10028983m.g Eutrema salsugineum HOM05D006913 ORTHO05D008720 1.6e-51 206.8 200 60.5
A03p31400 Brassica napus HOM05D006913 ORTHO05D008720 2.1e-51 206.5 181 62.4
BraA03t12321Z Brassica rapa HOM05D006913 ORTHO05D008720 2.1e-51 206.5 181 63.0
C03p38310 Brassica napus HOM05D006913 ORTHO05D008720 3.6e-51 205.7 182 62.6
DCAR_002917 Daucus carota HOM05D006913 ORTHO05D008720 3.6e-51 205.7 210 60.0
Aa31LG5G1440 Aethionema arabicum HOM05D006913 ORTHO05D008720 4.7e-51 205.3 154 68.8
BcaC01g06792 Brassica carinata HOM05D006913 ORTHO05D008720 4.7e-51 205.3 182 62.6
BolC3t16112H Brassica oleracea HOM05D006913 ORTHO05D008720 4.7e-51 205.3 182 62.6
CiPaw.08G086000 Carya illinoinensis HOM05D006913 ORTHO05D008720 4.7e-51 205.3 207 60.4
Sabra02G0164300 Salix brachista HOM05D006913 ORTHO05D008720 1.4e-50 203.8 238 52.1
Os05g0133100 Oryza sativa ssp. japonica HOM05D006913 ORTHO05D008720 5.2e-50 201.8 176 65.3
Cc01_g21970 Coffea canephora HOM05D006913 ORTHO05D008720 6.8e-50 201.4 145 72.4
arahy.Tifrunner.gnm1.ann1.IRZ7G5 Arachis hypogaea HOM05D006913 ORTHO05D008720 2.0e-49 199.9 201 58.7
Solyc01g015000.3 Solanum lycopersicum HOM05D006913 ORTHO05D008720 2.9e-48 196.1 112 92.9
BcaB01g02393 Brassica carinata HOM05D006913 ORTHO05D008720 7.1e-47 191.4 138 71.0
Mapoly0061s0127 Marchantia polymorpha HOM05D006913 ORTHO05D008720 1.3e-45 187.2 142 66.9
Pp3c4_15530 Physcomitrium patens HOM05D006913 ORTHO05D008720 6.6e-45 184.9 152 62.5
Lj1C13T3 Lonicera japonica HOM05D006913 ORTHO05D008720 3.6e-43 179.1 104 89.4
vmacro15097 Vaccinium macrocarpon HOM05D006913 ORTHO05D008720 3.6e-43 179.1 104 87.5
COL.COLO4_23180 Corchorus olitorius HOM05D006913 ORTHO05D008720 1.8e-42 176.8 106 84.9
AUR62024592 Chenopodium quinoa HOM05D006913 ORTHO05D008720 2.0e-41 173.3 189 55.6
Eucgr.H00899 Eucalyptus grandis HOM05D006913 ORTHO05D008720 2.6e-41 172.9 160 62.5
AagrBONN_evm.TU.Sc2ySwM_228.182 Anthoceros agrestis HOM05D006913 ORTHO05D008720 5.4e-39 165.2 124 66.9
SGA_v2.0_scaffold80G25710 Striga asiatica HOM05D006913 ORTHO05D008720 5.4e-39 165.2 182 54.9
FAN23G2363 Fragaria x ananassa HOM05D000049 ORTHO05D000027 7.8e-38 161.4 234 48.3
Ca_09230_v3 Cicer arietinum L. HOM05D006913 ORTHO05D008720 1.7e-37 160.2 96 84.4
SMO364G0946 Selaginella moellendorffii HOM05D006913 ORTHO05D008720 1.1e-36 157.5 102 78.4
Oeu038057.1 Olea europaea HOM05D006913 ORTHO05D008720 2.1e-35 153.3 218 45.9
SEGI_19322 Sequoiadendron giganteum HOM05D006913 ORTHO05D008720 2.1e-35 153.3 117 70.1
Duzib211G0548 Durio zibethinus HOM05D006913 ORTHO05D008720 8.1e-35 151.4 108 70.4
Hund09668 Selenicereus undatus HOM05D006913 ORTHO05D008720 1.3e-32 144.1 172 51.7
CARHR249910 Cardamine hirsuta HOM05D006913 ORTHO05D008720 1.9e-28 130.2 89 77.5
Phvul.001G215500 Phaseolus vulgaris HOM05D006913 ORTHO05D008720 1.9e-28 130.2 135 53.3
MCO04G045 Micromonas commoda HOM05D006913 ORTHO05D008720 3.1e-26 122.9 189 40.2
Cre07.g357350 Chlamydomonas reinhardtii HOM05D006913 ORTHO05D008720 5.3e-26 122.1 164 42.7
GSVIVG01010608001 Vitis vinifera HOM05D006913 ORTHO05D008720 9.0e-26 121.3 71 91.5
GSVIVG01037028001 Vitis vinifera HOM05D006913 ORTHO05D008720 9.0e-26 121.3 71 91.5
Hma1.2p1_3252F.1_g334540 Hydrangea macrophylla HOM05D006913 ORTHO05D008720 5.8e-25 118.6 142 51.4
Nitab4.5_0001013g0020 Nicotiana tabacum HOM05D006913 ORTHO05D008720 7.6e-25 118.2 133 54.9
HPP92_027923 Vanilla planifolia HOM05D006913 ORTHO05D008720 5.5e-23 112.1 69 84.1
Eucgr.L01805 Eucalyptus grandis HOM05D006913 ORTHO05D008720 1.2e-22 110.9 111 56.8
HPP92_027922 Vanilla planifolia HOM05D006913 ORTHO05D008720 1.0e-16 91.3 134 41.8
Haze_27360 Corylus avellana HOM05D006913 ORTHO05D008720 7.1e-15 85.1 109 37.6
C09p01450 Brassica napus HOM05D006913 ORTHO05D008720 9.0e-10 68.2 39 79.5
BolC9t53077H Brassica oleracea HOM05D006913 ORTHO05D008720 9.0e-10 68.2 39 79.5


User provided reference genes

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