Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 4.1e-80 301.2 140 100.0
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 1.5e-61 239.6 145 79.3
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 7.3e-61 237.3 112 95.5
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 8.1e-60 233.8 145 77.9
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 3.4e-58 228.4 145 75.9
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 2.1e-47 192.6 115 80.9
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.2e-44 183.3 139 63.3
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 3.6e-44 181.8 142 62.7
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 8.1e-44 180.6 139 65.5
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 8.1e-44 180.6 139 62.6
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 1.1e-43 180.3 139 64.0
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 3.1e-43 178.7 142 64.1
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 8.9e-43 177.2 139 64.0
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 8.9e-43 177.2 139 61.2
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 8.9e-43 177.2 142 61.3
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 1.2e-42 176.8 139 61.2
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 3.4e-42 175.3 142 61.3
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 4.4e-42 174.9 139 60.4
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 4.4e-42 174.9 139 63.3
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 7.6e-42 174.1 139 61.2
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 9.9e-42 173.7 142 62.7
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 9.9e-42 173.7 142 61.3
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 1.7e-41 172.9 143 62.2
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 2.2e-41 172.6 142 62.0
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 2.9e-41 172.2 142 60.6
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 4.2e-40 168.3 139 62.6
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 5.4e-40 167.9 112 73.2
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 1.2e-39 166.8 142 56.3
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 2.7e-39 165.6 142 59.2
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 1.7e-38 162.9 139 58.3
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 2.3e-38 162.5 138 60.9
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 3.1e-35 152.1 142 57.7
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 9.0e-35 150.6 139 56.8
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 1.2e-34 150.2 124 62.1
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 2.0e-34 149.4 139 58.3
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 7.6e-34 147.5 147 56.5
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 9.9e-34 147.1 147 56.5
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 9.9e-34 147.1 146 56.8
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 1.3e-33 146.7 147 56.5
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 1.3e-33 146.7 147 56.5
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 2.9e-33 145.6 136 57.4
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 2.9e-33 145.6 146 56.2
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 8.4e-33 144.1 146 55.5
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 2.4e-32 142.5 139 51.8
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 4.2e-32 141.7 142 50.7
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 4.2e-32 141.7 147 54.4
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 1.6e-31 139.8 141 53.2
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 5.1e-30 134.8 149 47.7
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 6.7e-30 134.4 132 56.8
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 2.5e-29 132.5 117 57.3
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 9.6e-29 130.6 137 52.6
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 1.2e-26 123.6 137 47.4
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 9.9e-26 120.6 141 47.5
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 1.7e-25 119.8 174 43.1
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 2.4e-24 115.9 194 40.7
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 3.2e-24 115.5 149 45.0
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 3.2e-24 115.5 146 47.9
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 6.0e-23 111.3 140 44.3
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 1.0e-22 110.5 133 48.1
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 1.3e-20 103.6 179 36.9
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 4.0e-19 98.6 144 38.9
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 6.9e-19 97.8 78 62.8
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 5.8e-18 94.7 75 57.3
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 1.3e-17 93.6 142 36.6
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 1.7e-17 93.2 71 63.4
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 2.2e-17 92.8 72 63.9
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 4.9e-17 91.7 68 63.2
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 1.4e-16 90.1 77 58.4
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 3.2e-16 89.0 68 63.2
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 4.2e-16 88.6 75 57.3
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 7.1e-16 87.8 82 56.1
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 1.2e-15 87.0 68 63.2
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 2.1e-15 86.3 64 64.1
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 6.0e-15 84.7 48 77.1
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 6.0e-15 84.7 68 60.3
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 5.1e-14 81.6 67 59.7
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 1.5e-13 80.1 96 50.0
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 5.7e-13 78.2 73 54.8
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 5.7e-13 78.2 73 50.7
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 7.4e-13 77.8 67 59.7
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 9.6e-13 77.4 57 64.9
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 1.1e-11 73.9 62 56.5
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 1.1e-11 73.9 76 52.6
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 1.4e-11 73.6 68 55.9
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 1.8e-11 73.2 48 68.8
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 5.3e-11 71.6 42 71.4
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 5.3e-11 71.6 58 58.6
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 2.0e-10 69.7 59 59.3
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 4.5e-10 68.6 57 59.6
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 7.6e-10 67.8 60 55.0
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 2.9e-09 65.9 70 51.4
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 8.5e-09 64.3 54 55.6
Gohir.A12G120600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 9.3e-08 60.8 59 50.8
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 3.6e-07 58.9 145 31.7
CAN.G151.20 Capsicum annuum HOM05D000329 ORTHO05D000833 2.3e-06 56.2 42 69.0
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 8.7e-06 54.3 51 54.9


User provided reference genes

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