Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003322g0070 Nicotiana tabacum HOM05D005057 ORTHO05D006570 1.2e-138 496.5 252 100.0
Nitab4.5_0000681g0230 Nicotiana tabacum HOM05D005057 ORTHO05D006570 2.6e-125 452.2 237 97.5
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 5.3e-102 374.8 249 80.7
Solyc02g076950.2 Solanum lycopersicum HOM05D005057 ORTHO05D006570 3.8e-100 368.6 249 79.9
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 2.1e-87 326.2 262 70.6
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 4.8e-87 325.1 268 70.1
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 4.8e-87 325.1 173 94.2
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 6.2e-87 324.7 249 73.5
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 1.8e-86 323.2 262 71.8
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 9.0e-86 320.9 258 70.2
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 4.5e-85 318.5 256 69.5
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 7.6e-85 317.8 250 71.2
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 1.3e-84 317.0 248 71.0
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 1.7e-84 316.6 250 70.8
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 2.2e-84 316.2 249 70.7
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 2.9e-84 315.8 253 70.8
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 4.9e-84 315.1 254 70.9
PSO782G3653 Papaver somniferum HOM05D005057 ORTHO05D006570 1.1e-83 313.9 257 68.9
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 1.4e-83 313.5 247 71.3
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 1.9e-83 313.2 252 69.4
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 1.9e-83 313.2 246 72.0
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 2.5e-83 312.8 254 71.3
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 4.2e-83 312.0 278 65.5
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 4.2e-83 312.0 249 69.9
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 5.5e-83 311.6 246 72.8
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 7.1e-83 311.2 250 71.2
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 1.6e-82 310.1 247 71.3
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 2.1e-82 309.7 257 67.7
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 2.1e-82 309.7 249 69.1
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 4.6e-82 308.5 212 77.4
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 7.9e-82 307.8 249 69.1
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 1.0e-81 307.4 173 89.6
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 1.0e-81 307.4 212 75.0
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 1.3e-81 307.0 278 64.4
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 1.8e-81 306.6 246 69.1
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 2.3e-81 306.2 202 80.2
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 3.0e-81 305.8 223 73.5
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 3.9e-81 305.4 189 84.1
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 5.1e-81 305.1 234 72.2
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 6.7e-81 304.7 208 76.4
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 6.7e-81 304.7 173 87.9
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 1.1e-80 303.9 188 83.0
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 2.5e-80 302.8 251 68.1
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 2.5e-80 302.8 249 68.7
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 2.5e-80 302.8 250 70.0
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 3.3e-80 302.4 246 68.7
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 3.3e-80 302.4 205 75.6
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 3.3e-80 302.4 246 69.9
Zm00001eb162010 Zea mays HOM05D005057 ORTHO05D006570 3.3e-80 302.4 203 75.9
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 4.3e-80 302.0 221 73.3
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 4.3e-80 302.0 242 67.4
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 4.3e-80 302.0 248 69.0
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 5.7e-80 301.6 187 81.3
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 5.7e-80 301.6 242 67.8
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 5.7e-80 301.6 207 77.3
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 5.7e-80 301.6 220 74.1
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 7.4e-80 301.2 242 67.4
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 9.7e-80 300.8 247 68.0
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 9.7e-80 300.8 173 87.3
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 9.7e-80 300.8 190 81.1
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 1.3e-79 300.4 266 65.4
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 2.8e-79 299.3 173 85.5
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 2.8e-79 299.3 173 85.5
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 4.8e-79 298.5 220 72.3
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 6.3e-79 298.1 173 86.7
Psat1g199000 Pisum sativum HOM05D005057 ORTHO05D006570 8.2e-79 297.7 252 67.1
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 1.4e-78 297.0 256 67.6
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 1.8e-78 296.6 173 84.4
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 1.8e-78 296.6 253 66.8
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 1.8e-78 296.6 261 67.4
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 3.1e-78 295.8 270 65.9
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 3.1e-78 295.8 242 69.4
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 4.1e-78 295.4 188 81.4
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 1.2e-77 293.9 166 87.3
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 1.2e-77 293.9 275 61.8
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 2.6e-77 292.7 233 68.2
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 4.5e-77 292.0 225 70.7
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 4.5e-77 292.0 239 68.2
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 3.8e-76 288.9 173 84.4
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 1.1e-75 287.3 193 79.3
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 2.3e-73 279.6 188 76.6
Lalb_Chr18g0059151 Lupinus albus HOM05D005057 ORTHO05D006570 7.7e-69 264.6 256 64.5
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 2.9e-68 262.7 187 73.3
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 1.1e-67 260.8 173 73.4
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 1.4e-67 260.4 172 80.2
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 1.9e-67 260.0 252 60.3
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 8.5e-60 234.6 189 64.0
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 1.9e-59 233.4 188 66.5
Nn1g09100 Nelumbo nucifera HOM05D005057 ORTHO05D006570 1.4e-57 227.3 206 65.5
QL05p046461 Quercus lobata HOM05D005057 ORTHO05D006570 3.0e-57 226.1 164 74.4
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 1.1e-56 224.2 231 59.3
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 2.0e-56 223.4 176 65.3
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 1.2e-53 214.2 203 60.6
Os01g0613900 Oryza sativa ssp. japonica HOM05D005057 ORTHO05D006570 1.6e-53 213.8 137 78.1
TPR.G30010 Trifolium pratense HOM05D005057 ORTHO05D006570 1.7e-52 210.3 175 64.6
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 6.5e-52 208.4 291 50.5
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 8.5e-52 208.0 280 50.4
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 9.4e-51 204.5 234 57.7
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 2.0e-48 196.8 173 63.0
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 4.4e-48 195.7 173 63.6
Ca_30957_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 5.7e-48 195.3 184 62.0
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 7.5e-48 194.9 218 59.2
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 5.9e-45 185.3 173 62.4
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.7e-44 183.7 249 52.2
BcaC01g06160 Brassica carinata HOM05D005057 ORTHO05D006570 1.9e-43 180.3 235 54.5
BcaC04g22954 Brassica carinata HOM05D005057 ORTHO05D006570 1.4e-41 174.1 227 52.0
C09p55570 Brassica napus HOM05D005057 ORTHO05D006570 1.4e-41 174.1 227 52.0
BolC9t54241H Brassica oleracea HOM05D005057 ORTHO05D006570 1.4e-41 174.1 227 52.0
HPP92_020166 Vanilla planifolia HOM05D005057 ORTHO05D006570 8.6e-36 154.8 122 73.8
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 1.6e-34 150.6 180 53.3
TAR626G0988 Trochodendron aralioides HOM05D005057 ORTHO05D006570 5.2e-33 145.6 153 60.1
unitig_22.g6756 Utricularia gibba HOM05D005057 ORTHO05D006570 7.0e-30 135.2 77 87.0
COL.COLO4_25087 Corchorus olitorius HOM05D005057 ORTHO05D006570 1.7e-28 130.6 74 78.4
unitig_22.g6755 Utricularia gibba HOM05D005057 ORTHO05D006570 5.2e-25 119.0 65 90.8
SEGI_02925 Sequoiadendron giganteum HOM05D005057 ORTHO05D006570 1.9e-22 110.5 65 83.1
HPP92_020183 Vanilla planifolia HOM05D005057 ORTHO05D006570 3.2e-22 109.8 86 64.0
MD16G1033100 Malus domestica HOM05D005057 ORTHO05D006570 6.6e-20 102.1 62 79.0
BolC4t26729H Brassica oleracea HOM05D005057 ORTHO05D006570 2.5e-19 100.1 89 65.2
Glyma.14G170500 Glycine max HOM05D005057 ORTHO05D006570 2.5e-19 100.1 121 52.9
BolC7t41970H Brassica oleracea HOM05D005057 ORTHO05D006570 1.2e-18 97.8 98 60.2
TPR.G11697 Trifolium pratense HOM05D005057 ORTHO05D006570 5.2e-17 92.4 50 92.0
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 8.9e-17 91.7 49 93.9
Nn1g09052 Nelumbo nucifera HOM05D005057 ORTHO05D006570 1.2e-16 91.3 51 90.2
BcaC01g03610 Brassica carinata HOM05D005057 ORTHO05D019871 2.5e-11 73.6 73 50.7


User provided reference genes

Program Settings