Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003320g0010 Nicotiana tabacum HOM05D000690 ORTHO05D002679 4.7e-55 217.6 111 100.0
Peaxi162Scf00418g00036 Petunia axillaris HOM05D000690 ORTHO05D002679 3.4e-21 105.1 68 77.9
Nitab4.5_0000024g0310 Nicotiana tabacum HOM05D000690 ORTHO05D002679 4.5e-21 104.8 68 77.9
Nitab4.5_0001565g0010 Nicotiana tabacum HOM05D000690 ORTHO05D002679 3.5e-18 95.1 68 69.1
Nitab4.5_0009109g0030 Nicotiana tabacum HOM05D000690 ORTHO05D002679 1.0e-17 93.6 64 70.3
Peaxi162Scf00533g00815 Petunia axillaris HOM05D000690 ORTHO05D002679 2.3e-17 92.4 68 64.7
Oeu005157.1 Olea europaea HOM05D000690 ORTHO05D002679 3.9e-17 91.7 69 68.1
Oeu060634.2 Olea europaea HOM05D000690 ORTHO05D002679 3.9e-17 91.7 68 66.2
CAN.G1875.1 Capsicum annuum HOM05D000690 ORTHO05D002679 6.7e-17 90.9 68 69.1
Rhsim05G0004600 Rhododendron simsii HOM05D000690 ORTHO05D002679 8.7e-17 90.5 69 68.1
Atru.chr7.1742 Acer truncatum HOM05D000690 ORTHO05D002679 1.9e-16 89.4 68 63.2
MSTRG.26484 Avicennia marina HOM05D000690 ORTHO05D002679 1.9e-16 89.4 66 63.6
CAN.G1058.45 Capsicum annuum HOM05D000690 ORTHO05D002679 4.3e-16 88.2 68 67.6
CSS0019997 Camellia sinensis var. sinensis HOM05D000690 ORTHO05D002679 9.7e-16 87.0 70 64.3
Medtr4g124930 Medicago truncatula HOM05D000690 ORTHO05D002679 9.7e-16 87.0 57 73.7
Oeu025292.1 Olea europaea HOM05D000690 ORTHO05D002679 9.7e-16 87.0 56 75.0
PGSC0003DMG400025721 Solanum tuberosum HOM05D000690 ORTHO05D002679 1.6e-15 86.3 68 64.7
Actinidia30244 Actinidia chinensis HOM05D000690 ORTHO05D002679 2.8e-15 85.5 68 63.2
GSVIVG01015039001 Vitis vinifera HOM05D000690 ORTHO05D002679 2.8e-15 85.5 57 73.7
CiPaw.03G203200 Carya illinoinensis HOM05D000690 ORTHO05D002679 3.7e-15 85.1 57 71.9
MSTRG.19442 Avicennia marina HOM05D000690 ORTHO05D002679 6.3e-15 84.3 69 63.8
Ca_09314_v3 Cicer arietinum L. HOM05D000690 ORTHO05D002679 6.3e-15 84.3 57 71.9
Cpa.g.sc28.8 Carica papaya HOM05D000690 ORTHO05D002679 1.1e-14 83.6 68 61.8
Haze_26041 Corylus avellana HOM05D000690 ORTHO05D002679 1.1e-14 83.6 68 61.8
Glyma.13G112200 Glycine max HOM05D000690 ORTHO05D002679 1.4e-14 83.2 68 60.3
Glyma.17G047500 Glycine max HOM05D000690 ORTHO05D002679 1.4e-14 83.2 68 60.3
Aqoxy7G01008 Aquilegia oxysepala HOM05D000690 ORTHO05D002679 1.8e-14 82.8 55 69.1
Cc00_g22710 Coffea canephora HOM05D000690 ORTHO05D002679 1.8e-14 82.8 70 61.4
Solyc07g042190.3 Solanum lycopersicum HOM05D000690 ORTHO05D002679 2.4e-14 82.4 68 63.2
Thecc.09G073100 Theobroma cacao HOM05D000690 ORTHO05D002679 3.1e-14 82.0 68 63.2
Ciclev10009353m.g Citrus clementina HOM05D000690 ORTHO05D002679 4.1e-14 81.6 68 58.8
PGR142G1551 Punica granatum HOM05D000690 ORTHO05D002679 4.1e-14 81.6 67 59.7
Migut.J00904 Erythranthe guttata HOM05D000690 ORTHO05D002679 5.3e-14 81.3 63 66.7
Rhsim03G0226500 Rhododendron simsii HOM05D000690 ORTHO05D002679 6.9e-14 80.9 60 71.7
RcHm_v2.0_Chr2g0095501 Rosa chinensis HOM05D000690 ORTHO05D002679 6.9e-14 80.9 70 64.3
Manes.03G042600 Manihot esculenta HOM05D000690 ORTHO05D002679 9.0e-14 80.5 68 58.8
TWI34G1591 Tripterygium wilfordii HOM05D000690 ORTHO05D002679 9.0e-14 80.5 57 66.7
TAR626G1114 Trochodendron aralioides HOM05D000690 ORTHO05D002679 9.0e-14 80.5 66 59.1
TWI63G0686 Tripterygium wilfordii HOM05D000690 ORTHO05D002679 1.5e-13 79.7 58 69.0
Cfa002961 Carpinus fangiana HOM05D000690 ORTHO05D002679 2.6e-13 79.0 69 60.9
Lalb_Chr08g0232731 Lupinus albus HOM05D000690 ORTHO05D002679 2.6e-13 79.0 68 54.4
SalBow6G2022 Salvia bowleyana HOM05D000690 ORTHO05D002679 2.6e-13 79.0 71 56.3
arahy.Tifrunner.gnm1.ann1.ZM2HAN Arachis hypogaea HOM05D000690 ORTHO05D002679 3.4e-13 78.6 68 55.9
Lalb_Chr12g0200281 Lupinus albus HOM05D000690 ORTHO05D002679 3.4e-13 78.6 96 47.9
CiPaw.04G141100 Carya illinoinensis HOM05D000690 ORTHO05D002679 4.5e-13 78.2 55 67.3
Migut.L01583 Erythranthe guttata HOM05D000690 ORTHO05D002679 4.5e-13 78.2 68 57.4
Phvul.003G129000 Phaseolus vulgaris HOM05D000690 ORTHO05D002679 4.5e-13 78.2 68 55.9
Phvul.009G225200 Phaseolus vulgaris HOM05D000690 ORTHO05D002679 5.9e-13 77.8 57 64.9
Potri.006G139200 Populus trichocarpa HOM05D000690 ORTHO05D002679 5.9e-13 77.8 68 55.9
Sabra06G0108800 Salix brachista HOM05D000690 ORTHO05D002679 5.9e-13 77.8 68 57.4
Lalb_Chr23g0276311 Lupinus albus HOM05D000690 ORTHO05D002679 7.6e-13 77.4 68 52.9
Nn8g38579 Nelumbo nucifera HOM05D000690 ORTHO05D002679 7.6e-13 77.4 68 60.3
arahy.Tifrunner.gnm1.ann1.I4UMUP Arachis hypogaea HOM05D000690 ORTHO05D002679 1.0e-12 77.0 99 45.5
COL.COLO4_18062 Corchorus olitorius HOM05D000690 ORTHO05D002679 1.0e-12 77.0 69 60.9
Sopen07g021800 Solanum pennellii HOM05D000690 ORTHO05D002679 1.3e-12 76.6 68 58.8
Ca_02228_v3 Cicer arietinum L. HOM05D000690 ORTHO05D002679 2.2e-12 75.9 69 55.1
MD15G1220800 Malus domestica HOM05D000690 ORTHO05D002679 2.2e-12 75.9 57 64.9
Nn6g35673 Nelumbo nucifera HOM05D000690 ORTHO05D002679 2.2e-12 75.9 69 55.1
Duzib150G1085 Durio zibethinus HOM05D000690 ORTHO05D002679 3.8e-12 75.1 68 57.4
Duzib168G1432 Durio zibethinus HOM05D000690 ORTHO05D002679 3.8e-12 75.1 68 55.9
Lj6g0020365 Lotus japonicus HOM05D000690 ORTHO05D002679 3.8e-12 75.1 68 54.4
vmacro06352 Vaccinium macrocarpon HOM05D000690 ORTHO05D002679 3.8e-12 75.1 71 57.7
TPR.G12617 Trifolium pratense HOM05D000690 ORTHO05D002679 5.0e-12 74.7 57 64.9
SGA_v2.0_scaffold21G09531 Striga asiatica HOM05D000690 ORTHO05D002679 8.5e-12 73.9 69 56.5
TAR624G0399 Trochodendron aralioides HOM05D000690 ORTHO05D002679 8.5e-12 73.9 66 54.5
VMungo1309G2086 Vigna mungo HOM05D000690 ORTHO05D002679 8.5e-12 73.9 57 59.6
FvH4_1g09090 Fragaria vesca HOM05D000690 ORTHO05D002679 1.4e-11 73.2 70 58.6
FAN19G2614 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-11 73.2 70 58.6
FAN23G0675 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-11 73.2 70 58.6
FAN26G0308 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-11 73.2 70 58.6
FAN26G2648 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-11 73.2 70 58.6
FAN28G2744 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-11 73.2 70 58.6
FAN28G2832 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-11 73.2 70 58.6
Gohir.D06G077700 Gossypium hirsutum HOM05D000690 ORTHO05D002679 1.4e-11 73.2 69 56.5
Dinv25533 Davidia involucrata HOM05D000690 ORTHO05D002679 2.5e-11 72.4 69 62.3
Gohir.A06G078600 Gossypium hirsutum HOM05D000690 ORTHO05D002679 2.5e-11 72.4 69 56.5
Psat4g018960 Pisum sativum HOM05D000690 ORTHO05D002679 2.5e-11 72.4 57 63.2
Glyma.09G071800 Glycine max HOM05D000690 ORTHO05D002679 3.2e-11 72.0 59 64.4
QL11p001312 Quercus lobata HOM05D000690 ORTHO05D002679 3.2e-11 72.0 68 55.9
Glyma.15G179800 Glycine max HOM05D000690 ORTHO05D002679 4.2e-11 71.6 59 64.4
SalBow3G1831 Salvia bowleyana HOM05D000690 ORTHO05D002679 4.2e-11 71.6 57 61.4
Duzib187G0020 Durio zibethinus HOM05D000690 ORTHO05D002679 5.5e-11 71.2 69 58.0
Gorai.010G090800 Gossypium raimondii HOM05D000690 ORTHO05D002679 5.5e-11 71.2 69 55.1
MBI19_g29875_MAGBIO Magnolia biondii HOM05D000690 ORTHO05D002679 7.2e-11 70.9 55 58.2
Manes.16G093000 Manihot esculenta HOM05D000690 ORTHO05D002679 9.4e-11 70.5 57 63.2
vmacro17108 Vaccinium macrocarpon HOM05D000690 ORTHO05D002679 9.4e-11 70.5 62 58.1
Prupe.7G194600 Prunus persica HOM05D000690 ORTHO05D002679 1.2e-10 70.1 57 59.6
Psat0s2945g0080 Pisum sativum HOM05D000690 ORTHO05D002679 1.6e-10 69.7 68 54.4
EL10Ac8g18999 Beta vulgaris HOM05D000690 ORTHO05D002679 2.1e-10 69.3 60 56.7
Eucgr.C03298 Eucalyptus grandis HOM05D000690 ORTHO05D002679 3.6e-10 68.6 74 51.4
SGA_v2.0_scaffold297G47587 Striga asiatica HOM05D000690 ORTHO05D002679 3.6e-10 68.6 58 56.9
Medtr2g042970 Medicago truncatula HOM05D000690 ORTHO05D002679 4.6e-10 68.2 57 59.6
TAR468G0001 Trochodendron aralioides HOM05D000690 ORTHO05D002679 6.1e-10 67.8 66 54.5
Lj4A916T19 Lonicera japonica HOM05D000690 ORTHO05D002679 7.9e-10 67.4 70 55.7
PSO386G0242 Papaver somniferum HOM05D000690 ORTHO05D002679 7.9e-10 67.4 67 52.2
PSO724G1067 Papaver somniferum HOM05D000690 ORTHO05D002679 7.9e-10 67.4 67 52.2
Lj4g0003690 Lotus japonicus HOM05D000690 ORTHO05D002679 1.0e-09 67.0 69 55.1
MBI13_g00688_MAGBIO Magnolia biondii HOM05D000690 ORTHO05D002679 1.0e-09 67.0 66 48.5
Hund08838 Selenicereus undatus HOM05D000690 ORTHO05D002679 1.0e-09 67.0 59 59.3
Hund26063 Selenicereus undatus HOM05D000690 ORTHO05D002679 1.8e-09 66.2 61 52.5
BcaB02g06974 Brassica carinata HOM05D000690 ORTHO05D002679 2.3e-09 65.9 79 43.0
Gohir.A07G016100 Gossypium hirsutum HOM05D000690 ORTHO05D002679 3.0e-09 65.5 69 53.6
Gohir.D07G015800 Gossypium hirsutum HOM05D000690 ORTHO05D002679 3.0e-09 65.5 69 53.6
Gorai.001G016700 Gossypium raimondii HOM05D000690 ORTHO05D002679 3.0e-09 65.5 69 53.6
MD02G1096300 Malus domestica HOM05D000690 ORTHO05D002679 3.0e-09 65.5 58 60.3
BolC6t39932H Brassica oleracea HOM05D000690 ORTHO05D002679 3.9e-09 65.1 82 40.2
BcaC08g46927 Brassica carinata HOM05D000690 ORTHO05D002679 5.1e-09 64.7 82 40.2
C06p48950 Brassica napus HOM05D000690 ORTHO05D002679 5.1e-09 64.7 82 40.2
Aa31LG4G5150 Aethionema arabicum HOM05D000690 ORTHO05D002679 6.7e-09 64.3 84 42.9
PSO421G0334 Papaver somniferum HOM05D000690 ORTHO05D002679 6.7e-09 64.3 77 51.9
AT1G74940 Arabidopsis thaliana HOM05D000690 ORTHO05D002679 8.8e-09 63.9 68 45.6
BcaNung06477 Brassica carinata HOM05D000690 ORTHO05D002679 8.8e-09 63.9 81 40.7
Sp5g30080 Schrenkiella parvula HOM05D000690 ORTHO05D002679 8.8e-09 63.9 57 50.9
Carub.0002s2173 Capsella rubella HOM05D000690 ORTHO05D002679 1.5e-08 63.2 83 41.0
Thhalv10019122m.g Eutrema salsugineum HOM05D000690 ORTHO05D002679 1.5e-08 63.2 57 52.6
A07p29150 Brassica napus HOM05D000690 ORTHO05D002679 2.5e-08 62.4 53 54.7
BraA07t30554Z Brassica rapa HOM05D000690 ORTHO05D002679 2.5e-08 62.4 53 54.7
HPP92_013276 Vanilla planifolia HOM05D000690 ORTHO05D002679 3.3e-08 62.0 92 39.1
Aa31LG1G13980 Aethionema arabicum HOM05D000690 ORTHO05D002679 4.3e-08 61.6 117 37.6
AL2G34830 Arabidopsis lyrata HOM05D000690 ORTHO05D002679 5.7e-08 61.2 68 44.1
CANSAT56G1930 Cannabis sativa HOM05D000690 ORTHO05D002679 5.7e-08 61.2 63 55.6
PSO421G0213 Papaver somniferum HOM05D000690 ORTHO05D002679 5.7e-08 61.2 79 48.1
TWI34G1037 Tripterygium wilfordii HOM05D000690 ORTHO05D002679 5.7e-08 61.2 66 45.5
MELO3C015541.2 Cucumis melo HOM05D000690 ORTHO05D002679 7.4e-08 60.8 58 60.3
Sc08g0009030 Simmondsia chinensis HOM05D000690 ORTHO05D002679 9.7e-08 60.5 65 52.3
CsaV3_1G041300 Cucumis sativus L. HOM05D000690 ORTHO05D002679 1.3e-07 60.1 59 57.6
Prupe.1G064600 Prunus persica HOM05D000690 ORTHO05D002679 1.3e-07 60.1 53 52.8
GSVIVG01032258001 Vitis vinifera HOM05D000690 ORTHO05D002679 1.3e-07 60.1 66 43.9
ClCG03G014840 Citrullus lanatus HOM05D000690 ORTHO05D002679 1.7e-07 59.7 58 58.6
Sed0004619 Sechium edule HOM05D000690 ORTHO05D002679 1.7e-07 59.7 57 56.1
CARHR068260 Cardamine hirsuta HOM05D000690 ORTHO05D002679 2.8e-07 58.9 83 41.0
HPP92_016594 Vanilla planifolia HOM05D000690 ORTHO05D002679 2.8e-07 58.9 62 51.6
AT5G20700 Arabidopsis thaliana HOM05D000690 ORTHO05D002679 3.7e-07 58.5 65 47.7
BolC6t38420H Brassica oleracea HOM05D000690 ORTHO05D002679 3.7e-07 58.5 79 43.0
Peaxi162Scf00006g03310 Petunia axillaris HOM05D000690 ORTHO05D002679 3.7e-07 58.5 53 49.1
C06p33030 Brassica napus HOM05D000690 ORTHO05D002679 4.8e-07 58.2 79 41.8
Carub.0006s1904 Capsella rubella HOM05D000690 ORTHO05D002679 4.8e-07 58.2 65 47.7
Eucgr.C00783 Eucalyptus grandis HOM05D000690 ORTHO05D002679 4.8e-07 58.2 68 51.5
PGSC0003DMG400020401 Solanum tuberosum HOM05D000690 ORTHO05D002679 4.8e-07 58.2 53 49.1
A07p40580 Brassica napus HOM05D000690 ORTHO05D002679 6.3e-07 57.8 80 38.8
BraA07t31602Z Brassica rapa HOM05D000690 ORTHO05D002679 6.3e-07 57.8 80 38.8
Solyc12g017850.2 Solanum lycopersicum HOM05D000690 ORTHO05D002679 6.3e-07 57.8 53 49.1
Sopen12g008660 Solanum pennellii HOM05D000690 ORTHO05D002679 6.3e-07 57.8 53 49.1
ATR0626G267 Amborella trichopoda HOM05D000690 ORTHO05D002679 8.2e-07 57.4 66 42.4
Aqoxy7G02612 Aquilegia oxysepala HOM05D000690 ORTHO05D002679 8.2e-07 57.4 66 42.4
AL6G32260 Arabidopsis lyrata HOM05D000690 ORTHO05D002679 1.1e-06 57.0 65 46.2
MD16G1238400 Malus domestica HOM05D000690 ORTHO05D002679 1.1e-06 57.0 53 49.1
RcHm_v2.0_Chr4g0397681 Rosa chinensis HOM05D000690 ORTHO05D002679 1.1e-06 57.0 54 53.7
CARHR192110 Cardamine hirsuta HOM05D000690 ORTHO05D002679 1.4e-06 56.6 65 46.2
Cc00_g00160 Coffea canephora HOM05D000690 ORTHO05D000388 1.4e-06 56.6 75 37.3
Thhalv10014483m.g Eutrema salsugineum HOM05D000690 ORTHO05D002679 1.4e-06 56.6 65 46.2
FvH4_4g06100 Fragaria vesca HOM05D000690 ORTHO05D002679 1.4e-06 56.6 54 53.7
FAN07G2002 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-06 56.6 54 53.7
FAN12G4257 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-06 56.6 54 53.7
FAN22G0604 Fragaria x ananassa HOM05D000690 ORTHO05D002679 1.4e-06 56.6 54 53.7
MBI16_g00846_MAGBIO Magnolia biondii HOM05D000690 ORTHO05D002679 1.4e-06 56.6 66 40.9
HPP92_011065 Vanilla planifolia HOM05D000690 ORTHO05D002679 1.4e-06 56.6 63 49.2
Lsat_1_v5_gn_8_85861 Lactuca sativa HOM05D000690 ORTHO05D002679 1.8e-06 56.2 69 47.8
Nitab4.5_0000219g0120 Nicotiana tabacum HOM05D000690 ORTHO05D002679 1.8e-06 56.2 53 47.2
PSO104G0175 Papaver somniferum HOM05D000690 ORTHO05D002679 1.8e-06 56.2 77 45.5
Thecc.09G195800 Theobroma cacao HOM05D000690 ORTHO05D002679 1.8e-06 56.2 81 37.0
arahy.Tifrunner.gnm1.ann1.NJE7MY Arachis hypogaea HOM05D000690 ORTHO05D002679 2.4e-06 55.8 68 48.5
BcaC08g46962 Brassica carinata HOM05D000690 ORTHO05D002679 2.4e-06 55.8 83 36.1
Lj7A689T79 Lonicera japonica HOM05D000690 ORTHO05D002679 2.4e-06 55.8 75 44.0
Nitab4.5_0005753g0020 Nicotiana tabacum HOM05D000690 ORTHO05D002679 2.4e-06 55.8 53 47.2
Sp6g23780 Schrenkiella parvula HOM05D000690 ORTHO05D002679 2.4e-06 55.8 65 44.6
TAR383G0298 Trochodendron aralioides HOM05D000690 ORTHO05D002679 3.1e-06 55.5 55 47.3
CAN.G8.45 Capsicum annuum HOM05D000690 ORTHO05D002679 4.1e-06 55.1 53 45.3
Hma1.2p1_0263F.1_g105470 Hydrangea macrophylla HOM05D000690 ORTHO05D002679 4.1e-06 55.1 66 40.9
Os02g0174800 Oryza sativa ssp. japonica HOM05D000690 ORTHO05D002679 4.1e-06 55.1 55 43.6
DCAR_024769 Daucus carota HOM05D000690 ORTHO05D002679 5.3e-06 54.7 71 49.3
arahy.Tifrunner.gnm1.ann1.GQ96QH Arachis hypogaea HOM05D000690 ORTHO05D002679 6.9e-06 54.3 68 47.1
ATR0681G345 Amborella trichopoda HOM05D000690 ORTHO05D002679 9.1e-06 53.9 55 45.5
DCAR_009045 Daucus carota HOM05D000690 ORTHO05D002679 9.1e-06 53.9 66 42.4
Dinv12609 Davidia involucrata HOM05D000690 ORTHO05D002679 9.1e-06 53.9 66 42.4
PGSC0003DMG400009560 Solanum tuberosum HOM05D000690 ORTHO05D002679 9.1e-06 53.9 54 50.0


User provided reference genes

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