Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.1e-59 233.0 113 100.0
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 3.9e-57 224.6 113 95.6
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 5.2e-57 224.2 113 95.6
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 6.7e-57 223.8 113 95.6
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 1.1e-56 223.0 113 96.5
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 2.6e-56 221.9 113 95.6
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 9.7e-56 219.9 113 94.7
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 7.7e-45 183.7 113 78.8
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 1.7e-44 182.6 115 81.7
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 6.5e-44 180.6 99 88.9
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.1e-43 179.9 114 80.7
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 1.5e-43 179.5 114 78.1
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 1.9e-43 179.1 115 77.4
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 4.2e-43 177.9 98 87.8
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 4.2e-43 177.9 113 79.6
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 4.2e-43 177.9 114 78.9
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 5.5e-43 177.6 114 80.7
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 7.2e-43 177.2 116 78.4
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 9.4e-43 176.8 115 78.3
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 9.4e-43 176.8 96 88.5
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 76.1
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 3.6e-42 174.9 114 76.3
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 4.7e-42 174.5 97 87.6
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 4.7e-42 174.5 113 78.8
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 8.0e-42 173.7 102 83.3
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 8.0e-42 173.7 113 76.1
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 8.0e-42 173.7 114 76.3
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 1.0e-41 173.3 114 74.6
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.8e-41 172.6 114 78.9
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 4.0e-41 171.4 114 77.2
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 6.8e-41 170.6 123 75.6
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 6.8e-41 170.6 123 75.6
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 8.8e-41 170.2 114 74.6
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 8.8e-41 170.2 114 74.6
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 1.2e-40 169.9 114 75.4
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 1.5e-40 169.5 110 75.5
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.6e-40 168.7 114 72.8
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 3.4e-40 168.3 105 79.0
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 3.4e-40 168.3 113 73.5
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 4.4e-40 167.9 103 79.6
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 7.5e-40 167.2 97 82.5
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 7.5e-40 167.2 103 81.6
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 9.8e-40 166.8 117 76.1
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 9.8e-40 166.8 117 76.1
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 9.8e-40 166.8 97 81.4
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 9.8e-40 166.8 116 75.9
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 1.3e-39 166.4 110 73.6
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 1.3e-39 166.4 114 76.3
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 1.7e-39 166.0 114 74.6
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.7e-39 166.0 114 74.6
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.7e-39 166.0 114 74.6
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.7e-39 166.0 114 74.6
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.7e-39 166.0 114 72.8
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 1.7e-39 166.0 97 80.4
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 4.8e-39 164.5 116 69.0
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 6.3e-39 164.1 116 68.1
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 6.3e-39 164.1 116 74.1
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 1.1e-38 163.3 97 80.4
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.8e-38 162.5 111 72.1
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.8e-38 162.5 109 70.6
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 2.4e-38 162.2 115 76.5
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 2.4e-38 162.2 96 78.1
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 4.1e-38 161.4 112 67.9
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 4.1e-38 161.4 119 65.5
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 1.2e-37 159.8 118 72.9
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 2.7e-37 158.7 99 77.8
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 3.5e-37 158.3 97 77.3
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 4.5e-37 157.9 97 75.3
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 5.9e-37 157.5 99 76.8
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 7.7e-37 157.1 104 74.0
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 1.7e-36 156.0 97 73.2
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 2.2e-36 155.6 97 73.2
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 2.2e-36 155.6 97 73.2
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 2.2e-36 155.6 97 73.2
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 2.2e-36 155.6 97 73.2
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 2.2e-36 155.6 115 66.1
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 2.9e-36 155.2 102 70.6
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 2.9e-36 155.2 97 72.2
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 8.5e-36 153.7 98 74.5
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 2.5e-35 152.1 98 77.6
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 2.5e-35 152.1 80 87.5
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 3.2e-35 151.8 106 70.8
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 2.1e-34 149.1 122 62.3
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 3.6e-34 148.3 98 71.4
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 6.1e-34 147.5 81 85.2
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 1.8e-33 146.0 81 79.0
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 2.2e-31 139.0 97 69.1
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.5e-27 126.3 94 72.3
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.2e-26 123.2 83 75.9
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 2.8e-26 122.1 96 60.4
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 2.3e-25 119.0 100 56.0
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 6.8e-25 117.5 75 72.0
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 5.7e-24 114.4 94 53.2
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.2e-23 112.5 93 58.1
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 3.7e-23 111.7 64 84.4
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 2.7e-21 105.5 87 54.0
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 2.7e-21 105.5 60 83.3
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 1.7e-15 86.3 84 44.0
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 5.6e-11 71.2 93 35.5
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 8.3e-07 57.4 51 56.9


User provided reference genes

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