Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 7.4e-161 570.5 284 100.0
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 2.1e-147 525.8 278 95.0
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 6.3e-136 487.6 280 86.4
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 1.2e-134 483.4 280 86.4
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 1.5e-126 456.4 238 91.6
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 5.9e-110 401.4 250 76.0
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 1.3e-109 400.2 250 76.0
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 1.9e-108 396.4 277 71.8
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 5.5e-108 394.8 235 78.7
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 1.4e-106 390.2 282 70.2
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 3.0e-106 389.0 280 67.1
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 5.2e-106 388.3 229 80.3
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 5.2e-106 388.3 228 81.1
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 5.2e-106 388.3 242 74.8
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.2e-105 387.1 261 72.8
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 2.0e-105 386.3 279 69.9
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 2.0e-105 386.3 281 68.0
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 4.4e-105 385.2 233 79.4
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 5.7e-105 384.8 221 80.5
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 7.5e-105 384.4 275 69.5
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 7.5e-105 384.4 244 75.4
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 9.8e-105 384.0 247 75.3
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 6.3e-104 381.3 285 68.4
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 1.1e-103 380.6 279 69.5
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 1.8e-103 379.8 277 69.0
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 4.1e-103 378.6 284 66.5
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 7.0e-103 377.9 284 66.2
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 9.1e-103 377.5 240 74.6
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 9.1e-103 377.5 240 74.6
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 2.0e-102 376.3 243 74.1
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 2.7e-102 375.9 278 67.3
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 3.5e-102 375.6 285 66.0
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 5.9e-102 374.8 281 65.1
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 7.7e-102 374.4 221 78.7
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 1.0e-101 374.0 250 72.4
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 1.0e-101 374.0 291 65.3
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 1.0e-101 374.0 297 65.3
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 1.3e-101 373.6 244 72.1
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 1.7e-101 373.2 280 66.4
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 2.9e-101 372.5 277 66.4
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 3.8e-101 372.1 291 65.6
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 5.0e-101 371.7 277 67.1
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 8.6e-101 370.9 276 67.0
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 8.6e-101 370.9 275 68.7
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 1.1e-100 370.5 221 79.2
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 1.9e-100 369.8 286 65.4
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 9.5e-100 367.5 288 64.6
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.2e-99 367.1 275 66.5
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 1.6e-99 366.7 221 78.3
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 4.7e-99 365.2 277 65.7
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 4.7e-99 365.2 280 65.0
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.0e-98 364.0 275 65.8
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 1.0e-98 364.0 288 62.2
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 1.4e-98 363.6 290 66.2
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 3.0e-98 362.5 228 73.7
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 3.0e-98 362.5 261 70.5
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 4.0e-98 362.1 248 70.2
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 6.8e-98 361.3 243 72.0
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 8.9e-98 360.9 275 66.9
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 1.2e-97 360.5 183 92.9
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 1.5e-97 360.1 259 67.2
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 3.4e-97 359.0 231 74.5
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 7.5e-97 357.8 233 72.1
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 4.9e-96 355.1 288 63.9
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 6.4e-96 354.8 245 70.6
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 8.3e-96 354.4 259 66.4
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 1.4e-95 353.6 243 69.5
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 3.2e-95 352.4 278 66.2
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 5.4e-95 351.7 240 70.4
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 2.7e-94 349.4 221 73.8
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 5.9e-94 348.2 259 66.8
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 7.8e-94 347.8 285 62.5
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 7.8e-94 347.8 284 62.3
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 3.0e-93 345.9 242 68.6
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 6.6e-93 344.7 284 64.8
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 8.6e-93 344.4 289 60.9
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 8.6e-93 344.4 290 62.1
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 8.6e-93 344.4 235 67.2
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.1e-92 344.0 294 62.6
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 1.5e-92 343.6 287 63.1
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 1.5e-92 343.6 233 70.8
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 7.3e-92 341.3 290 61.4
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 9.5e-92 340.9 237 66.7
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 2.1e-91 339.7 277 62.1
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 6.2e-91 338.2 285 61.4
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 8.0e-91 337.8 290 61.4
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 2.9e-88 329.3 283 60.1
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 3.2e-87 325.9 300 56.3
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 3.9e-85 318.9 201 72.1
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 3.9e-85 318.9 253 60.9
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 2.5e-84 316.2 279 58.8
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 1.6e-83 313.5 229 62.4
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 2.3e-82 309.7 253 61.3
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 6.8e-82 308.1 280 57.9
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 8.9e-82 307.8 221 64.7
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 9.8e-81 304.3 240 62.1
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 1.3e-80 303.9 238 63.4
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 1.7e-80 303.5 164 88.4
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 2.2e-80 303.1 280 56.4
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 2.2e-80 303.1 230 65.7
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 1.4e-79 300.4 221 66.1
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 3.2e-79 299.3 249 60.2
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 1.2e-78 297.4 259 58.3
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 1.2e-78 297.4 183 77.0
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 1.6e-78 297.0 229 61.6
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 1.6e-78 297.0 227 64.8
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 4.6e-78 295.4 183 76.0
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 4.3e-76 288.9 271 58.3
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 7.3e-76 288.1 271 58.3
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 1.1e-74 284.3 175 77.1
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 1.8e-74 283.5 259 56.4
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 3.2e-71 272.7 179 71.5
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 5.2e-66 255.4 288 53.1
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 1.0e-61 241.1 193 62.7
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 1.9e-60 236.9 228 54.8
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 1.1e-52 211.1 265 43.0
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 2.2e-48 196.8 126 74.6
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 1.1e-47 194.5 310 37.4
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 9.3e-47 191.4 285 45.3
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 7.9e-46 188.3 120 69.2
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 5.6e-44 182.2 261 42.1
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 1.3e-43 181.0 136 61.0
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 1.0e-40 171.4 113 73.5
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 5.5e-39 165.6 127 63.0
SMO202G0011 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 5.5e-31 139.0 115 58.3
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 9.3e-31 138.3 77 81.8
BolC4t27198H Brassica oleracea HOM05D005844 ORTHO05D007203 2.8e-27 126.7 136 52.9
QL12p001810 Quercus lobata HOM05D005844 ORTHO05D007203 2.8e-27 126.7 72 79.2
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 3.1e-26 123.2 77 72.7
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 3.4e-25 119.8 81 67.9
Cfa024741 Carpinus fangiana HOM05D005844 ORTHO05D007203 2.3e-21 107.1 253 31.2
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 9.1e-18 95.1 78 61.5
CARHR261460 Cardamine hirsuta HOM05D005844 ORTHO05D007203 5.2e-13 79.3 56 62.5
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 4.4e-12 76.3 85 45.9


User provided reference genes

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