Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 8.7e-145 516.9 256 100.0
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 2.3e-137 492.3 259 94.2
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 1.0e-124 450.3 261 86.6
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 2.5e-123 445.7 256 87.5
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 2.7e-122 442.2 256 87.5
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 1.4e-121 439.9 258 86.8
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 2.5e-115 419.1 256 83.6
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 5.2e-105 384.8 256 73.8
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.5e-104 383.3 253 75.9
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 1.3e-100 370.2 250 72.0
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 1.7e-100 369.8 249 74.3
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 2.9e-100 369.0 257 72.4
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 5.0e-100 368.2 249 73.1
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 1.5e-99 366.7 251 71.7
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 3.2e-99 365.5 249 75.1
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 5.5e-99 364.8 261 71.3
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 7.2e-99 364.4 254 71.3
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 7.2e-99 364.4 258 70.2
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 9.4e-99 364.0 251 71.3
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 2.7e-98 362.5 252 72.2
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 6.1e-98 361.3 250 72.0
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 1.0e-97 360.5 248 75.0
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.4e-97 360.1 229 76.4
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.4e-97 360.1 250 72.0
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.8e-97 359.8 250 71.2
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 3.0e-97 359.0 250 71.2
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 5.2e-97 358.2 237 75.1
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 5.2e-97 358.2 242 71.9
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.2e-96 357.1 207 80.7
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 1.5e-96 356.7 229 75.5
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.5e-96 356.7 229 75.5
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 2.6e-96 355.9 259 70.3
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 3.4e-96 355.5 228 75.4
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 5.7e-96 354.8 243 72.8
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 5.7e-96 354.8 227 75.3
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.3e-95 353.6 255 68.6
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 1.7e-95 353.2 252 70.6
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 8.3e-95 350.9 255 71.4
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 2.4e-94 349.4 298 63.1
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 3.1e-94 349.0 249 70.3
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.6e-93 346.7 256 68.4
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 2.7e-93 345.9 251 68.1
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 4.5e-93 345.1 204 78.4
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 5.9e-93 344.7 252 69.4
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 7.7e-93 344.4 205 78.0
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 7.7e-93 344.4 254 67.7
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 1.0e-92 344.0 250 68.8
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 1.0e-92 344.0 204 79.9
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 5.0e-92 341.7 209 76.1
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 8.6e-92 340.9 207 75.8
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 1.9e-91 339.7 240 67.5
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 1.9e-91 339.7 240 67.5
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.9e-91 339.7 259 66.4
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 1.9e-91 339.7 259 66.4
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 1.2e-90 337.0 250 66.4
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 2.8e-90 335.9 254 66.9
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 2.8e-90 335.9 249 67.5
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 3.6e-90 335.5 245 67.8
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 3.6e-90 335.5 236 68.6
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 6.1e-90 334.7 208 75.5
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 6.1e-90 334.7 256 66.0
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 2.3e-89 332.8 210 72.9
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 3.0e-89 332.4 196 77.6
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 5.2e-89 331.6 199 79.9
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 5.2e-89 331.6 248 67.3
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 6.8e-89 331.3 206 74.8
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 2.0e-88 329.7 252 67.1
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 7.5e-88 327.8 211 72.5
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 7.5e-88 327.8 235 67.2
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 3.7e-87 325.5 204 75.0
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 4.9e-87 325.1 235 67.7
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 1.4e-86 323.6 257 63.0
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 7.0e-86 321.2 229 70.3
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 1.2e-85 320.5 220 70.9
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 2.0e-85 319.7 204 72.1
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 2.7e-85 319.3 252 63.5
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 4.5e-85 318.5 240 69.2
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 7.8e-85 317.8 254 63.8
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 2.3e-84 316.2 200 75.0
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 3.3e-83 312.4 191 75.9
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 7.3e-83 311.2 255 64.3
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 1.6e-82 310.1 194 75.8
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 2.8e-82 309.3 224 66.5
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 6.1e-82 308.1 260 63.1
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 1.0e-81 307.4 188 75.5
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 2.3e-81 306.2 244 62.3
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 6.8e-81 304.7 170 82.9
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 1.5e-80 303.5 175 80.6
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 2.6e-80 302.8 251 62.9
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 7.5e-80 301.2 169 80.5
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 1.7e-79 300.1 196 73.0
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 8.3e-79 297.7 196 70.9
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 1.1e-78 297.4 212 68.4
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 3.2e-78 295.8 178 78.7
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 2.1e-74 283.1 169 79.3
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 8.9e-73 277.7 171 76.0
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 1.7e-68 263.5 258 56.6
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 5.1e-68 261.9 163 72.4
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 8.3e-63 244.6 253 53.8
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.4e-62 243.0 191 64.4
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.6e-60 235.0 139 79.1
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 4.4e-56 222.2 169 59.2
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 8.4e-55 218.0 239 49.0
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 6.0e-53 211.8 202 50.0
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 1.1e-43 181.0 173 59.0
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 8.4e-39 164.9 159 49.7
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 5.1e-28 129.0 170 47.1
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 1.3e-26 124.4 240 37.1
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 4.5e-24 115.9 75 74.7
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.4e-22 110.9 63 77.8
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 7.9e-21 105.1 59 78.0
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.5e-19 100.1 80 61.2
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 3.7e-10 69.7 62 50.0


User provided reference genes

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