Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-85 318.9 165 100.0
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-41 173.7 232 50.9
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-37 160.2 234 49.1
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.1e-37 158.3 154 64.3
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-36 155.6 154 63.0
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.6e-36 154.8 123 73.2
Nitab4.5_0003569g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.6e-35 153.3 212 50.0
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.1e-35 151.0 263 44.1
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-33 146.0 208 48.6
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-33 144.8 169 56.8
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.9e-33 144.1 142 63.4
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 3.8e-32 142.1 120 68.3
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-32 141.4 154 57.8
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.2e-31 139.0 154 57.1
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.7e-29 131.0 233 40.8
Nitab4.5_0000160g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-27 127.1 109 70.6
Nitab4.5_0000481g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.0e-25 119.8 75 88.0
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-24 114.8 193 43.0
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.4e-23 111.7 142 52.8
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.9e-22 107.8 266 34.6
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-21 107.5 137 53.3
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.7e-21 104.4 224 38.8
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-20 103.6 123 56.1
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 1.4e-18 97.1 209 36.4
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-18 96.7 136 49.3
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.1e-18 95.9 142 43.7
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.3e-18 95.1 210 40.5
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.3e-18 95.1 139 44.6
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.0e-18 94.4 148 46.6
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.2e-17 94.0 144 43.8
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.0e-17 93.2 144 43.1
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 2.6e-17 92.8 144 47.2
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 3.4e-17 92.4 144 43.1
Nitab4.5_0006582g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.5e-17 92.0 107 55.1
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.8e-17 91.7 168 41.7
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 7.6e-17 91.3 144 43.1
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 6.4e-16 88.2 191 37.7
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 1.1e-15 87.4 144 44.4
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-15 86.7 264 31.8
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-15 86.7 191 37.2
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-14 84.0 84 54.8
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.9e-14 81.3 204 35.3
Nitab4.5_0007326g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.1e-13 78.6 44 93.2
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-12 77.4 177 36.7
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-12 76.6 225 32.4
Nitab4.5_0005263g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.3e-12 75.9 42 95.2
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 5.6e-12 75.1 131 39.7
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 7.4e-12 74.7 106 48.1
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 7.4e-12 74.7 124 41.9
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.6e-11 73.6 132 38.6
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-11 73.2 127 44.9
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.1e-11 71.2 103 50.5
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-10 70.9 161 32.9
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-10 70.9 123 42.3
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.8e-10 70.1 143 37.1
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-10 68.9 143 40.6
PGSC0003DMG400045822 Solanum tuberosum HOM05D003574 ORTHO05D002175 4.0e-10 68.9 104 46.2
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-10 68.6 130 39.2
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.9e-10 68.2 151 35.8
Nitab4.5_0000864g0250 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.5e-09 67.0 80 55.0
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 1.5e-09 67.0 101 44.6
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-09 66.6 129 38.8
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.0e-09 66.6 132 37.9
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.4e-09 65.9 120 40.0
Nitab4.5_0000050g0250 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-09 65.5 135 35.6
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.8e-09 65.1 181 35.4
Nitab4.5_0000663g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.6e-09 64.7 145 33.8
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 7.6e-09 64.7 74 56.8
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.0e-08 64.3 127 37.0
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.0e-08 64.3 139 33.8
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-08 63.9 120 39.2
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-08 63.9 150 36.7
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-08 62.8 148 35.1
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.9e-08 62.8 135 37.0
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-08 62.4 135 37.0
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-08 62.4 140 33.6
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.5e-08 61.6 130 35.4
CAN.G383.4 Capsicum annuum HOM05D003911 ORTHO05D002175 8.4e-08 61.2 135 36.3
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-08 61.2 140 40.0
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-08 61.2 148 33.8
Nitab4.5_0000230g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-07 60.8 110 45.5
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 1.4e-07 60.5 145 33.8
Nitab4.5_0000022g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-07 59.7 108 35.2
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-07 59.7 153 32.0
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 2.5e-07 59.7 137 36.5
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-07 59.7 120 40.0
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 3.2e-07 59.3 150 34.7
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-07 59.3 135 33.3
Nitab4.5_0000056g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-07 58.9 133 33.8
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.5e-07 58.5 132 35.6
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.1e-07 58.2 87 44.8
Nitab4.5_0005260g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-07 58.2 81 44.4
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 7.1e-07 58.2 157 33.8
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.3e-07 57.8 129 34.9
Nitab4.5_0011788g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.3e-07 57.8 120 36.7
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-06 57.4 126 34.9
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-06 57.4 135 34.1
Sopen03g026790 Solanum pennellii HOM05D003574 ORTHO05D002175 1.6e-06 57.0 150 34.0
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-06 56.6 129 36.4
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-06 56.2 135 31.1
Nitab4.5_0000043g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-06 55.8 128 33.6
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-06 55.8 135 33.3
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-06 55.1 130 33.8
Nitab4.5_0001859g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.9e-06 54.7 112 38.4


User provided reference genes

Program Settings