Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003287g0020 Nicotiana tabacum HOM05D003628 ORTHO05D004253 3.0e-310 1067.8 574 100.0
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 5.7e-221 771.2 540 81.3
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 2.1e-183 646.4 561 67.6
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 1.3e-169 600.5 539 67.2
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 1.1e-163 580.9 552 63.4
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 5.5e-155 552.0 599 58.6
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 1.0e-145 521.2 567 59.1
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 1.0e-145 521.2 599 56.8
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 3.0e-145 519.6 605 55.5
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 2.3e-137 493.4 583 54.5
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 3.0e-137 493.0 600 53.8
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 2.6e-136 490.0 600 53.7
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 1.4e-81 308.1 645 42.0
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 4.0e-81 306.6 598 43.1
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 2.9e-79 300.4 615 41.6
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 6.9e-73 279.3 626 38.8
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 4.4e-72 276.6 636 36.9
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 3.8e-71 273.5 632 39.1
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 1.4e-70 271.6 607 39.2
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 1.9e-70 271.2 644 38.2
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 3.5e-69 266.9 605 38.7
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 6.0e-69 266.2 640 38.1
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 1.5e-67 261.5 616 38.3
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 7.3e-67 259.2 626 37.7
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.6e-66 258.1 635 38.7
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 3.6e-66 256.9 605 37.7
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.6e-66 256.9 635 38.4
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 3.6e-66 256.9 635 38.1
Lj3A630T50 Lonicera japonica HOM05D003628 ORTHO05D004253 6.2e-66 256.1 573 40.5
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 1.1e-65 255.4 570 40.5
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 3.1e-65 253.8 619 39.4
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 1.5e-64 251.5 632 36.2
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 3.4e-64 250.4 626 37.9
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 7.6e-64 249.2 634 37.9
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 9.9e-64 248.8 613 38.0
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 1.9e-62 244.6 637 37.0
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 7.1e-62 242.7 623 38.4
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 1.6e-61 241.5 638 35.7
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 2.7e-61 240.7 643 37.2
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 7.9e-61 239.2 596 38.3
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 2.5e-59 234.2 668 36.4
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.3e-59 233.4 635 37.0
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 2.1e-58 231.1 635 38.3
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.8e-58 230.7 609 37.1
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 8.1e-58 229.2 660 34.8
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 2.4e-57 227.6 459 43.4
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 3.1e-57 227.3 580 35.3
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 4.0e-57 226.9 636 37.4
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 4.0e-57 226.9 633 36.3
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 9.0e-57 225.7 595 36.0
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 5.8e-56 223.0 401 44.9
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 2.9e-55 220.7 629 35.3
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.8e-55 220.3 235 59.1
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 3.8e-55 220.3 601 36.1
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 6.4e-55 219.5 595 36.6
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 6.4e-55 219.5 650 33.7
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 8.4e-55 219.2 597 35.8
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 9.3e-54 215.7 604 36.1
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 2.7e-53 214.2 270 53.0
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 2.7e-53 214.2 594 35.7
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 3.5e-53 213.8 598 36.3
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 3.5e-53 213.8 593 36.8
Cpa.g.sc59.57 Carica papaya HOM05D003628 ORTHO05D004253 1.3e-52 211.8 623 36.4
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 2.3e-52 211.1 584 36.6
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 5.1e-52 209.9 624 34.5
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 1.1e-51 208.8 691 34.9
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 1.5e-51 208.4 620 35.2
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.9e-51 208.0 602 36.2
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 3.3e-51 207.2 601 34.8
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 2.8e-50 204.1 153 73.9
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 3.7e-50 203.8 153 73.9
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 4.8e-50 203.4 632 34.3
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 1.4e-49 201.8 621 34.3
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 1.3e-47 195.3 631 35.2
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.9e-47 194.1 572 35.5
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 4.9e-47 193.4 582 35.4
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 6.5e-47 193.0 574 36.8
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.1e-46 192.2 599 34.4
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 2.5e-46 191.0 632 33.2
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.1e-45 188.0 603 32.5
Hund12227 Selenicereus undatus HOM05D003628 ORTHO05D004253 2.7e-45 187.6 580 35.2
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 3.0e-44 184.1 556 35.6
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 5.1e-44 183.3 597 34.0
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 5.1e-44 183.3 540 35.7
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 1.1e-43 182.2 612 32.0
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 1.1e-43 182.2 569 35.1
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 1.9e-43 181.4 578 33.7
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 5.7e-43 179.9 134 76.1
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 1.6e-42 178.3 605 34.4
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 1.6e-42 178.3 612 33.5
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 1.4e-41 175.3 153 68.0
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 1.4e-41 175.3 591 34.5
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 1.4e-41 175.3 554 33.9
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 4.1e-41 173.7 599 34.6
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 6.9e-41 172.9 617 32.1
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 3.8e-39 167.2 605 32.2
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 6.5e-39 166.4 269 43.1
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 8.5e-39 166.0 123 72.4
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 1.9e-38 164.9 125 71.2
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 1.2e-37 162.2 116 74.1
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 1.2e-37 162.2 591 34.0
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 1.6e-37 161.8 243 48.1
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 1.6e-37 161.8 243 48.1
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 2.1e-37 161.4 613 31.5
Thhalv10002420m.g Eutrema salsugineum HOM05D003628 ORTHO05D004253 1.8e-36 158.3 568 32.4
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.3e-36 157.9 630 30.6
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 1.1e-35 155.6 585 31.6
CDE04G0520 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 1.5e-35 155.2 118 70.3
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 4.3e-35 153.7 558 30.8
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 5.7e-35 153.3 596 32.0
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 7.4e-35 152.9 407 37.3
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 2.2e-34 151.4 349 39.5
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 3.7e-34 150.6 545 33.2
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 8.2e-34 149.4 108 73.1
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 5.3e-33 146.7 373 37.5
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 6.9e-33 146.4 211 48.3
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 1.5e-32 145.2 545 31.9
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 2.0e-32 144.8 581 29.9
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 2.6e-32 144.4 584 30.0
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 1.0e-31 142.5 582 31.6
CARHR100260 Cardamine hirsuta HOM05D003628 ORTHO05D004253 2.9e-31 141.0 560 30.9
Lj6A641G44 Lonicera japonica HOM05D003628 ORTHO05D004253 5.0e-31 140.2 599 31.7
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 1.4e-30 138.7 121 62.8
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 1.9e-30 138.3 556 31.3
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 1.9e-30 138.3 336 37.8
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 1.9e-30 138.3 100 69.0
MD13G1227500 Malus domestica HOM05D003628 ORTHO05D004253 9.4e-30 136.0 101 73.3
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 2.1e-29 134.8 267 40.4
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 3.6e-29 134.0 281 39.1
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 4.7e-29 133.7 97 76.3
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 7.9e-29 132.9 281 38.8
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 7.9e-29 132.9 361 35.7
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 1.5e-27 128.6 580 28.1
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 1.5e-27 128.6 576 30.0
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 1.3e-26 125.6 354 35.6
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 3.4e-24 117.5 148 46.6
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 1.7e-23 115.2 571 27.8
Pp3c20_15710 Physcomitrium patens HOM05D003628 ORTHO05D004253 1.0e-20 105.9 148 41.9
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 1.5e-19 102.1 148 43.2
Hma1.2p1_0112F.1_g055050 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 5.7e-19 100.1 62 87.1
Gohir.D09G057732 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.3e-18 99.0 69 78.3
Glyma.10G128300 Glycine max HOM05D003628 ORTHO05D004253 4.1e-17 94.0 389 29.6
Gohir.D03G086101 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.6e-16 91.3 62 79.0
Gorai.003G076100 Gossypium raimondii HOM05D005297 ORTHO05D006545 5.9e-16 90.1 62 79.0
Gorai.007G071000 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.0e-15 89.4 72 69.4
Gorai.007G244100 Gossypium raimondii HOM05D003628 ORTHO05D004253 1.3e-15 89.0 63 76.2
Gohir.D04G116566 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.7e-15 88.6 62 77.4
Gohir.D02G158575 Gossypium hirsutum HOM05D003628 ORTHO05D004253 4.2e-14 84.0 56 80.4
Gorai.010G154900 Gossypium raimondii HOM05D003628 ORTHO05D004253 9.4e-14 82.8 56 78.6
Gohir.D11G226200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.2e-13 82.4 56 78.6
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 1.6e-13 82.0 148 41.2
Gohir.D06G132966 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.1e-13 81.6 55 78.2
Gohir.D08G229150 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.6e-13 80.9 56 76.8
AagrBONN_evm.TU.Sc2ySwM_344.5018 Anthoceros agrestis HOM05D003628 ORTHO05D004253 1.4e-12 79.0 135 38.5
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 1.5e-11 75.5 516 28.1
Gohir.D08G165950 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.3e-11 74.3 50 78.0
Gorai.013G043600 Gossypium raimondii HOM05D003628 ORTHO05D004253 9.7e-11 72.8 50 76.0
Ah.14g082010 Amaranthus hybridus HOM05D003628 ORTHO05D004253 2.2e-10 71.6 49 77.6
Gohir.D11G243366 Gossypium hirsutum HOM05D003628 ORTHO05D004253 1.8e-09 68.6 63 65.1
Actinidia11386 Actinidia chinensis HOM05D003628 ORTHO05D004253 3.1e-09 67.8 552 27.5
AL2G14740 Arabidopsis lyrata HOM05D000013 ORTHO05D000011 5.3e-09 67.0 41 80.5
Pp3c23_8100 Physcomitrium patens HOM05D003628 ORTHO05D004253 2.7e-08 64.7 143 32.9
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 2.9e-07 61.2 148 31.8
Gohir.D01G060866 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.9e-07 61.2 39 76.9
Gohir.D01G077750 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.8e-07 60.8 40 75.0
Gohir.A11G239380 Gossypium hirsutum HOM05D003628 ORTHO05D004253 8.5e-07 59.7 39 74.4
Gohir.D06G084232 Gossypium hirsutum HOM05D003628 ORTHO05D016264 1.5e-06 58.9 37 78.4
Gorai.009G342200 Gossypium raimondii HOM05D003628 ORTHO05D016264 1.5e-06 58.9 37 78.4
Gohir.D08G175500 Gossypium hirsutum HOM05D003628 ORTHO05D004253 2.5e-06 58.2 39 71.8
Gorai.003G055900 Gossypium raimondii HOM05D005297 ORTHO05D006545 5.5e-06 57.0 39 71.8


User provided reference genes

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